FFCP PHASE1:Hg19::chr17:67875075..67875112,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:67875075..67875112,+ | |||
|description=CAGE_peak_at_chr17:67875075..67875112,+ | |description=CAGE_peak_at_chr17:67875075..67875112,+ | ||
|id=chr17:67875075..67875112,+ | |id=chr17:67875075..67875112,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.23e-24!180;CL:0000222!1.75e-21!119;CL:0002371!3.55e-21!591;CL:0000680!1.90e-20!57;CL:0000056!1.90e-20!57;CL:0000355!1.90e-20!57;CL:0000359!1.62e-19!32;CL:0000187!2.26e-18!54;CL:0000144!1.10e-17!625;CL:0000183!6.35e-17!59;CL:0002139!1.14e-16!24;CL:0000393!1.87e-15!60;CL:0000211!1.87e-15!60;CL:0000548!5.67e-15!679;CL:0000004!5.67e-15!679;CL:0000255!5.67e-15!679;CL:0000012!1.03e-14!682;CL:0000220!3.62e-14!246;CL:0000192!5.35e-14!42;CL:0000514!5.35e-14!42;CL:0002539!6.02e-14!10;CL:0002321!7.16e-14!248;CL:0000057!2.79e-13!75;CL:1000413!1.18e-12!9;CL:0000115!5.36e-12!35;CL:0000071!1.09e-11!18;CL:0002546!1.09e-11!18;CL:0000003!1.77e-11!722;CL:0000048!3.15e-11!430;CL:0000723!1.15e-10!436;CL:0000034!6.00e-10!444;CL:0002494!7.88e-10!16;CL:0002078!3.53e-09!44;CL:0002544!1.32e-08!6;CL:0002551!1.84e-08!6;CL:0002620!4.75e-07!23 | |ontology_enrichment_celltype=CL:0000055!4.23e-24!180;CL:0000222!1.75e-21!119;CL:0002371!3.55e-21!591;CL:0000680!1.90e-20!57;CL:0000056!1.90e-20!57;CL:0000355!1.90e-20!57;CL:0000359!1.62e-19!32;CL:0000187!2.26e-18!54;CL:0000144!1.10e-17!625;CL:0000183!6.35e-17!59;CL:0002139!1.14e-16!24;CL:0000393!1.87e-15!60;CL:0000211!1.87e-15!60;CL:0000548!5.67e-15!679;CL:0000004!5.67e-15!679;CL:0000255!5.67e-15!679;CL:0000012!1.03e-14!682;CL:0000220!3.62e-14!246;CL:0000192!5.35e-14!42;CL:0000514!5.35e-14!42;CL:0002539!6.02e-14!10;CL:0002321!7.16e-14!248;CL:0000057!2.79e-13!75;CL:1000413!1.18e-12!9;CL:0000115!5.36e-12!35;CL:0000071!1.09e-11!18;CL:0002546!1.09e-11!18;CL:0000003!1.77e-11!722;CL:0000048!3.15e-11!430;CL:0000723!1.15e-10!436;CL:0000034!6.00e-10!444;CL:0002494!7.88e-10!16;CL:0002078!3.53e-09!44;CL:0002544!1.32e-08!6;CL:0002551!1.84e-08!6;CL:0002620!4.75e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.09e-29;32!CL:0002539;5.52e-22;10!CL:1000413;3.69e-20;9!CL:0000192;3.92e-17;43!CL:0000187;1.59e-13;55!CL:0002544;2.24e-13;6!CL:0002551;3.38e-13;6!CL:0002139;4.05e-11;24!CL:0000071;4.59e-11;18!CL:0000393;8.20e-10;61!CL:0000211;8.20e-10;61!CL:0000115;9.19e-09;36!CL:0002592;1.40e-08;3!CL:0002621;2.18e-08;3!CL:0002494;2.21e-08;16!CL:0002582;6.79e-08;3!CL:0002166;2.59e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.80e-31,32;CL:0000187,1.39e-22,55;CL:0002539,3.04e-22,10;CL:0000192,1.45e-21,43;CL:0000514,1.45e-21,43;CL:0000680,5.17e-21,58;CL:0000056,5.17e-21,58;CL:0000355,5.17e-21,58;CL:1000413,4.45e-20,9;CL:0000222,6.06e-20,121;CL:0000393,1.33e-19,61;CL:0000211,1.33e-19,61;CL:0002321,2.77e-14,250;CL:0002544,2.54e-13,6;CL:0002551,4.41e-13,6;CL:0002139,5.23e-11,24;CL:0000071,5.87e-11,18;CL:0002546,5.87e-11,18;CL:0000115,8.56e-09,36;CL:0002592,1.40e-08,3;CL:0002621,2.22e-08,3;CL:0002494,2.39e-08,16;CL:0002582,6.27e-08,3;CL:0002166,2.40e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000514;3.92e-17;43!CL:0002546;4.59e-11;18!CL:0000355;8.01e-11;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!1.99e-30!42;UBERON:0003509!1.99e-30!42;UBERON:0004572!1.99e-30!42;UBERON:0000055!9.86e-30!69;UBERON:0004573!2.61e-29!33;UBERON:0004571!2.61e-29!33;UBERON:0000914!6.39e-29!83;UBERON:0002329!6.39e-29!83;UBERON:0003077!6.39e-29!83;UBERON:0003059!6.39e-29!83;UBERON:0007282!6.39e-29!83;UBERON:0009618!6.39e-29!83;UBERON:0007285!6.39e-29!83;UBERON:0002049!5.62e-28!79;UBERON:0007798!5.62e-28!79;UBERON:0001981!7.55e-27!60;UBERON:0007500!7.55e-27!60;UBERON:0004537!7.55e-27!60;UBERON:0006965!7.55e-27!60;UBERON:0004872!8.81e-26!84;UBERON:0004535!8.01e-25!110;UBERON:0001009!1.17e-23!113;UBERON:0004290!1.44e-23!70;UBERON:0000486!2.93e-23!82;UBERON:0000947!1.23e-18!21;UBERON:0010191!1.23e-18!21;UBERON:0001134!2.52e-18!61;UBERON:0002036!2.52e-18!61;UBERON:0003082!2.52e-18!61;UBERON:0002385!2.27e-17!63;UBERON:0001015!2.27e-17!63;UBERON:0000383!2.27e-17!63;UBERON:0003914!4.75e-16!118;UBERON:0000490!2.95e-15!138;UBERON:0004237!6.02e-14!10;UBERON:0004695!6.02e-14!10;UBERON:0002111!6.02e-14!10;UBERON:0004178!6.02e-14!10;UBERON:0005256!7.45e-14!143;UBERON:0003915!1.18e-12!9;UBERON:0004700!1.18e-12!9;UBERON:0001917!1.18e-12!9;UBERON:0001986!1.09e-11!18;UBERON:0004638!1.09e-11!18;UBERON:0004852!1.09e-11!18;UBERON:0002204!2.00e-10!167;UBERON:0000119!5.86e-10!312;UBERON:0001135!1.09e-09!15;UBERON:0000487!7.93e-09!22;UBERON:0000483!9.21e-09!309;UBERON:0002100!1.82e-08!216;UBERON:0006914!1.91e-08!25;UBERON:0000467!6.99e-08!625;UBERON:0000926!7.68e-08!448;UBERON:0004120!7.68e-08!448;UBERON:0006603!7.68e-08!448;UBERON:0000480!8.21e-08!626;UBERON:0002199!1.38e-07!45;UBERON:0002416!1.38e-07!45;UBERON:0000468!3.81e-07!659;UBERON:0003081!3.85e-07!216;UBERON:0002067!5.22e-07!9;UBERON:0004016!5.22e-07!9;UBERON:0010083!5.22e-07!9;UBERON:0000477!9.24e-07!286 | |ontology_enrichment_uberon=UBERON:0001637!1.99e-30!42;UBERON:0003509!1.99e-30!42;UBERON:0004572!1.99e-30!42;UBERON:0000055!9.86e-30!69;UBERON:0004573!2.61e-29!33;UBERON:0004571!2.61e-29!33;UBERON:0000914!6.39e-29!83;UBERON:0002329!6.39e-29!83;UBERON:0003077!6.39e-29!83;UBERON:0003059!6.39e-29!83;UBERON:0007282!6.39e-29!83;UBERON:0009618!6.39e-29!83;UBERON:0007285!6.39e-29!83;UBERON:0002049!5.62e-28!79;UBERON:0007798!5.62e-28!79;UBERON:0001981!7.55e-27!60;UBERON:0007500!7.55e-27!60;UBERON:0004537!7.55e-27!60;UBERON:0006965!7.55e-27!60;UBERON:0004872!8.81e-26!84;UBERON:0004535!8.01e-25!110;UBERON:0001009!1.17e-23!113;UBERON:0004290!1.44e-23!70;UBERON:0000486!2.93e-23!82;UBERON:0000947!1.23e-18!21;UBERON:0010191!1.23e-18!21;UBERON:0001134!2.52e-18!61;UBERON:0002036!2.52e-18!61;UBERON:0003082!2.52e-18!61;UBERON:0002385!2.27e-17!63;UBERON:0001015!2.27e-17!63;UBERON:0000383!2.27e-17!63;UBERON:0003914!4.75e-16!118;UBERON:0000490!2.95e-15!138;UBERON:0004237!6.02e-14!10;UBERON:0004695!6.02e-14!10;UBERON:0002111!6.02e-14!10;UBERON:0004178!6.02e-14!10;UBERON:0005256!7.45e-14!143;UBERON:0003915!1.18e-12!9;UBERON:0004700!1.18e-12!9;UBERON:0001917!1.18e-12!9;UBERON:0001986!1.09e-11!18;UBERON:0004638!1.09e-11!18;UBERON:0004852!1.09e-11!18;UBERON:0002204!2.00e-10!167;UBERON:0000119!5.86e-10!312;UBERON:0001135!1.09e-09!15;UBERON:0000487!7.93e-09!22;UBERON:0000483!9.21e-09!309;UBERON:0002100!1.82e-08!216;UBERON:0006914!1.91e-08!25;UBERON:0000467!6.99e-08!625;UBERON:0000926!7.68e-08!448;UBERON:0004120!7.68e-08!448;UBERON:0006603!7.68e-08!448;UBERON:0000480!8.21e-08!626;UBERON:0002199!1.38e-07!45;UBERON:0002416!1.38e-07!45;UBERON:0000468!3.81e-07!659;UBERON:0003081!3.85e-07!216;UBERON:0002067!5.22e-07!9;UBERON:0004016!5.22e-07!9;UBERON:0010083!5.22e-07!9;UBERON:0000477!9.24e-07!286 | ||
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|short_description=p@chr17:67875075..67875112,+ | |short_description=p@chr17:67875075..67875112,+ | ||
}} | }} |
Latest revision as of 20:23, 25 July 2015
Short description: | p@chr17:67875075..67875112, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:67875075..67875112, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.80e-31 | 32 |
muscle cell | 1.39e-22 | 55 |
aortic smooth muscle cell | 3.04e-22 | 10 |
smooth muscle cell | 1.45e-21 | 43 |
smooth muscle myoblast | 1.45e-21 | 43 |
muscle precursor cell | 5.17e-21 | 58 |
myoblast | 5.17e-21 | 58 |
multi-potent skeletal muscle stem cell | 5.17e-21 | 58 |
endothelial cell of artery | 4.45e-20 | 9 |
mesodermal cell | 6.06e-20 | 121 |
electrically responsive cell | 1.33e-19 | 61 |
electrically active cell | 1.33e-19 | 61 |
embryonic cell | 2.77e-14 | 250 |
aortic endothelial cell | 2.54e-13 | 6 |
fibroblast of dermis | 4.41e-13 | 6 |
endothelial cell of vascular tree | 5.23e-11 | 24 |
blood vessel endothelial cell | 5.87e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.87e-11 | 18 |
endothelial cell | 8.56e-09 | 36 |
smooth muscle cell of the coronary artery | 1.40e-08 | 3 |
gingival epithelial cell | 2.22e-08 | 3 |
cardiocyte | 2.39e-08 | 16 |
visceral preadipocyte | 6.27e-08 | 3 |
epithelial cell of Malassez | 2.40e-07 | 3 |