FFCP PHASE1:Hg19::chr17:63533962..63533988,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:63533962..63533988,- | |||
|coexpression_cluster_id=C159 | |coexpression_cluster_id=C159 | ||
|description=CAGE_peak_at_chr17:63533962..63533988,- | |description=CAGE_peak_at_chr17:63533962..63533988,- | ||
|id=chr17:63533962..63533988,- | |id=chr17:63533962..63533988,- | ||
|ontology_enrichment_celltype=CL:0002541!1.20e-08!3;CL:0002620!1.31e-08!23 | |ontology_enrichment_celltype=CL:0002541!1.20e-08!3;CL:0002620!1.31e-08!23 | ||
|ontology_enrichment_celltype_v019=CL:0002541;4.00e-21;3!CL:0002620;6.33e-10;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.15e-21,3;CL:0002620,6.23e-10,23 | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.97e-08;1!UBERON:0005425;6.41e-08;1!UBERON:0001045;9.61e-08;1 | |||
|ontology_enrichment_disease=DOID:17!5.72e-08!5;DOID:450!5.72e-08!5;DOID:66!5.72e-08!5;DOID:423!5.72e-08!5;DOID:0080000!5.72e-08!5;DOID:11722!5.72e-08!5 | |ontology_enrichment_disease=DOID:17!5.72e-08!5;DOID:450!5.72e-08!5;DOID:66!5.72e-08!5;DOID:423!5.72e-08!5;DOID:0080000!5.72e-08!5;DOID:11722!5.72e-08!5 | ||
|ontology_enrichment_disease_v019=DOID:1036;4.97e-08;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,5.03e-08,8 | |||
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|ontology_enrichment_uberon_v019=UBERON:0003124;4.00e-21;3!UBERON:0000920;4.00e-21;3!UBERON:0005631;3.79e-11;10!UBERON:0000158;3.79e-11;10!UBERON:0001282;2.61e-08;1!UBERON:0009842;2.61e-08;1!UBERON:0003704;2.61e-08;1!UBERON:0001171;2.61e-08;1!UBERON:0001172;2.61e-08;1!UBERON:0000941;6.41e-08;1!UBERON:0001785;6.41e-08;1!UBERON:0002464;6.41e-08;1!UBERON:0004904;6.41e-08;1!UBERON:0001021;6.41e-08;1!UBERON:0001154;9.61e-08;1!UBERON:0001153;9.61e-08;1!UBERON:0009854;9.61e-08;1!UBERON:0009856;1.12e-07;4!UBERON:0000478;6.34e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.15e-21,3;UBERON:0003124,6.97e-16,7;UBERON:0005631,4.45e-12,14;UBERON:0000158,4.45e-12,14;UBERON:0001282,2.52e-08,1;UBERON:0009842,2.52e-08,1;UBERON:0003704,2.52e-08,1;UBERON:0001171,2.52e-08,1;UBERON:0001172,2.52e-08,1;UBERON:0000941,5.79e-08,1;UBERON:0001785,5.79e-08,1;UBERON:0002464,5.79e-08,1;UBERON:0004904,5.79e-08,1;UBERON:0001021,5.79e-08,1;UBERON:0003902,5.79e-08,1;UBERON:0005425,5.79e-08,1;UBERON:0001154,8.69e-08,1;UBERON:0001153,8.69e-08,1;UBERON:0001045,8.69e-08,1;UBERON:0002097,3.53e-07,41;UBERON:0000478,6.02e-07,24 | |||
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| ||
|short_description=p@chr17:63533962..63533988,- | |short_description=p@chr17:63533962..63533988,- | ||
}} | }} |
Latest revision as of 19:59, 25 July 2015
Short description: | p@chr17:63533962..63533988, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:63533962..63533988, - |
Coexpression cluster: | C159_choriocarcinoma_pancreatic_placenta_chorionic_testicular_bronchioalveolar_seminal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.15e-21 | 3 |
skin fibroblast | 6.23e-10 | 23 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 3.15e-21 | 3 |
chorion | 6.97e-16 | 7 |
extraembryonic membrane | 4.45e-12 | 14 |
membranous layer | 4.45e-12 | 14 |
intralobular bile duct | 2.52e-08 | 1 |
acinus | 2.52e-08 | 1 |
intrahepatic bile duct | 2.52e-08 | 1 |
portal lobule | 2.52e-08 | 1 |
hepatic acinus | 2.52e-08 | 1 |
cranial nerve II | 5.79e-08 | 1 |
cranial nerve | 5.79e-08 | 1 |
nerve trunk | 5.79e-08 | 1 |
nerve connecting eye with brain | 5.79e-08 | 1 |
nerve | 5.79e-08 | 1 |
retinal neural layer | 5.79e-08 | 1 |
presumptive neural retina | 5.79e-08 | 1 |
vermiform appendix | 8.69e-08 | 1 |
caecum | 8.69e-08 | 1 |
midgut | 8.69e-08 | 1 |
skin of body | 3.53e-07 | 41 |
extraembryonic structure | 6.02e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 5.03e-08 | 8 |