FFCP PHASE1:Hg19::chr17:62774949..62774990,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:62774949..62774990,- | |||
|coexpression_cluster_id=C44 | |coexpression_cluster_id=C44 | ||
|description=CAGE_peak_at_chr17:62774949..62774990,- | |description=CAGE_peak_at_chr17:62774949..62774990,- | ||
|id=chr17:62774949..62774990,- | |id=chr17:62774949..62774990,- | ||
|ontology_enrichment_celltype=CL:0000784!2.46e-08!3;CL:0000842!2.82e-07!3 | |ontology_enrichment_celltype=CL:0000784!2.46e-08!3;CL:0000842!2.82e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000784;5.78e-51;3!CL:0000123;6.52e-34;2!CL:0000242;6.52e-34;2!CL:0000451;1.87e-14;10!CL:0000312;3.25e-14;5!CL:0000240;5.23e-12;6!CL:0000311;5.23e-12;6!CL:0000079;5.23e-12;6!CL:0000237;5.23e-12;6!CL:0000362;2.60e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,5.78e-51,3;CL:0000242,8.39e-34,2;CL:0000451,1.87e-14,10;CL:0000312,3.60e-14,5;CL:0000240,5.68e-12,6;CL:0000311,5.68e-12,6;CL:0000079,5.68e-12,6;CL:0000237,5.68e-12,6;CL:0000036,5.68e-12,6;CL:0000357,5.68e-12,6;CL:0000114,5.68e-12,6;CL:0000362,2.75e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.80e-23;3!UBERON:0005754;1.12e-17;1!CL:0000357;5.23e-12;6!CL:0000114;5.23e-12;6!UBERON:0010122;1.64e-09;2!UBERON:0007297;1.64e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.24e-40!115;UBERON:0001049!8.56e-27!57;UBERON:0005068!8.56e-27!57;UBERON:0006241!8.56e-27!57;UBERON:0007135!8.56e-27!57;UBERON:0001869!9.82e-23!32;UBERON:0002616!6.46e-22!59;UBERON:0001017!3.26e-21!82;UBERON:0001893!4.39e-21!34;UBERON:0005743!4.55e-21!86;UBERON:0002020!6.00e-21!34;UBERON:0003528!6.00e-21!34;UBERON:0002780!9.16e-21!41;UBERON:0001890!9.16e-21!41;UBERON:0006240!9.16e-21!41;UBERON:0003080!4.00e-20!42;UBERON:0002791!1.71e-19!33;UBERON:0002619!5.29e-19!22;UBERON:0000955!1.01e-18!69;UBERON:0006238!1.01e-18!69;UBERON:0003075!1.23e-18!86;UBERON:0007284!1.23e-18!86;UBERON:0001950!2.43e-18!20;UBERON:0000073!3.69e-18!94;UBERON:0001016!3.69e-18!94;UBERON:0002346!2.15e-17!90;UBERON:0000956!2.61e-16!25;UBERON:0000203!2.61e-16!25;UBERON:0003056!4.03e-13!61;UBERON:0000153!1.09e-11!129;UBERON:0007811!1.09e-11!129;UBERON:0000033!4.71e-11!123;UBERON:0004121!3.23e-10!169;UBERON:0001871!4.81e-10!7;UBERON:0000924!9.53e-10!173;UBERON:0006601!9.53e-10!173;UBERON:0000200!1.11e-09!6;UBERON:0000369!1.25e-09!4;UBERON:0002435!1.25e-09!4;UBERON:0000204!1.25e-09!4;UBERON:0010082!1.25e-09!4;UBERON:0002420!8.13e-09!9;UBERON:0007245!8.13e-09!9;UBERON:0010009!8.13e-09!9;UBERON:0010011!8.13e-09!9;UBERON:0000454!8.13e-09!9;UBERON:0003076!7.94e-08!15;UBERON:0003057!7.94e-08!15;UBERON:0005383!8.73e-08!3;UBERON:0005382!8.73e-08!3;UBERON:0000349!1.33e-07!5;UBERON:0002771!1.39e-07!3;UBERON:0006947!1.58e-07!3;UBERON:0004054!1.58e-07!3;UBERON:0000062!2.67e-07!511 | |ontology_enrichment_uberon=UBERON:0007023!7.24e-40!115;UBERON:0001049!8.56e-27!57;UBERON:0005068!8.56e-27!57;UBERON:0006241!8.56e-27!57;UBERON:0007135!8.56e-27!57;UBERON:0001869!9.82e-23!32;UBERON:0002616!6.46e-22!59;UBERON:0001017!3.26e-21!82;UBERON:0001893!4.39e-21!34;UBERON:0005743!4.55e-21!86;UBERON:0002020!6.00e-21!34;UBERON:0003528!6.00e-21!34;UBERON:0002780!9.16e-21!41;UBERON:0001890!9.16e-21!41;UBERON:0006240!9.16e-21!41;UBERON:0003080!4.00e-20!42;UBERON:0002791!1.71e-19!33;UBERON:0002619!5.29e-19!22;UBERON:0000955!1.01e-18!69;UBERON:0006238!1.01e-18!69;UBERON:0003075!1.23e-18!86;UBERON:0007284!1.23e-18!86;UBERON:0001950!2.43e-18!20;UBERON:0000073!3.69e-18!94;UBERON:0001016!3.69e-18!94;UBERON:0002346!2.15e-17!90;UBERON:0000956!2.61e-16!25;UBERON:0000203!2.61e-16!25;UBERON:0003056!4.03e-13!61;UBERON:0000153!1.09e-11!129;UBERON:0007811!1.09e-11!129;UBERON:0000033!4.71e-11!123;UBERON:0004121!3.23e-10!169;UBERON:0001871!4.81e-10!7;UBERON:0000924!9.53e-10!173;UBERON:0006601!9.53e-10!173;UBERON:0000200!1.11e-09!6;UBERON:0000369!1.25e-09!4;UBERON:0002435!1.25e-09!4;UBERON:0000204!1.25e-09!4;UBERON:0010082!1.25e-09!4;UBERON:0002420!8.13e-09!9;UBERON:0007245!8.13e-09!9;UBERON:0010009!8.13e-09!9;UBERON:0010011!8.13e-09!9;UBERON:0000454!8.13e-09!9;UBERON:0003076!7.94e-08!15;UBERON:0003057!7.94e-08!15;UBERON:0005383!8.73e-08!3;UBERON:0005382!8.73e-08!3;UBERON:0000349!1.33e-07!5;UBERON:0002771!1.39e-07!3;UBERON:0006947!1.58e-07!3;UBERON:0004054!1.58e-07!3;UBERON:0000062!2.67e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0000007;7.71e-34;2!UBERON:0006947;1.00e-22;3!UBERON:0004054;1.00e-22;3!UBERON:0001000;1.12e-17;1!UBERON:0000998;1.12e-17;1!UBERON:0006868;1.12e-17;1!UBERON:0005352;1.12e-17;1!UBERON:0003296;1.78e-17;4!UBERON:0010133;1.78e-17;4!UBERON:0005904;2.59e-17;4!UBERON:0002037;5.84e-12;6!UBERON:0001894;2.09e-10;7!UBERON:0001873;1.64e-09;2!UBERON:0002680;2.80e-08;9!UBERON:0001895;2.80e-08;9!UBERON:0000058;1.73e-07;10!UBERON:0000073;3.95e-07;53!UBERON:0002616;3.95e-07;53!UBERON:0003135;6.94e-07;11!UBERON:0005383;9.37e-07;3!UBERON:0005382;9.37e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,8.39e-34,2;UBERON:0006947,7.20e-23,3;UBERON:0004054,7.20e-23,3;UBERON:0001000,7.37e-18,1;UBERON:0005352,7.37e-18,1;UBERON:0000998,1.03e-17,1;UBERON:0006868,1.03e-17,1;UBERON:0003296,1.86e-17,4;UBERON:0010133,1.86e-17,4;UBERON:0005904,2.02e-17,4;UBERON:0002037,5.37e-12,6;UBERON:0006215,5.37e-12,6;UBERON:0001894,2.14e-10,7;UBERON:0006222,2.14e-10,7;UBERON:0001873,2.02e-09,2;UBERON:0010122,2.02e-09,2;UBERON:0002680,2.65e-08,9;UBERON:0001895,2.65e-08,9;UBERON:0010092,2.65e-08,9;UBERON:0000073,1.17e-07,53;UBERON:0002616,1.17e-07,53;UBERON:0010371,2.83e-07,104;UBERON:0001049,2.98e-07,56;UBERON:0005068,2.98e-07,56;UBERON:0006241,2.98e-07,56;UBERON:0007135,2.98e-07,56;UBERON:0003135,6.35e-07,11 | |||
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|short_description=p@chr17:62774949..62774990,- | |short_description=p@chr17:62774949..62774990,- | ||
}} | }} |
Latest revision as of 19:55, 25 July 2015
Short description: | p@chr17:62774949..62774990, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:62774949..62774990, - |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 5.78e-51 | 3 |
Merkel cell | 8.39e-34 | 2 |
dendritic cell | 1.87e-14 | 10 |
keratinocyte | 3.60e-14 | 5 |
stratified squamous epithelial cell | 5.68e-12 | 6 |
keratin accumulating cell | 5.68e-12 | 6 |
stratified epithelial cell | 5.68e-12 | 6 |
keratinizing barrier epithelial cell | 5.68e-12 | 6 |
epithelial fate stem cell | 5.68e-12 | 6 |
stratified epithelial stem cell | 5.68e-12 | 6 |
surface ectodermal cell | 5.68e-12 | 6 |
epidermal cell | 2.75e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 8.39e-34 | 2 |
male genital duct | 7.20e-23 | 3 |
internal male genitalia | 7.20e-23 | 3 |
vas deferens | 7.37e-18 | 1 |
spermatic cord | 7.37e-18 | 1 |
seminal vesicle | 1.03e-17 | 1 |
seminal fluid secreting gland | 1.03e-17 | 1 |
gland of diencephalon | 1.86e-17 | 4 |
neuroendocrine gland | 1.86e-17 | 4 |
duct of male reproductive system | 2.02e-17 | 4 |
cerebellum | 5.37e-12 | 6 |
rhombic lip | 5.37e-12 | 6 |
diencephalon | 2.14e-10 | 7 |
future diencephalon | 2.14e-10 | 7 |
caudate nucleus | 2.02e-09 | 2 |
future caudate nucleus | 2.02e-09 | 2 |
regional part of metencephalon | 2.65e-08 | 9 |
metencephalon | 2.65e-08 | 9 |
future metencephalon | 2.65e-08 | 9 |
regional part of nervous system | 1.17e-07 | 53 |
regional part of brain | 1.17e-07 | 53 |
ecto-epithelium | 2.83e-07 | 104 |
neural tube | 2.98e-07 | 56 |
neural rod | 2.98e-07 | 56 |
future spinal cord | 2.98e-07 | 56 |
neural keel | 2.98e-07 | 56 |
male reproductive organ | 6.35e-07 | 11 |