FFCP PHASE1:Hg19::chr17:61598180..61598190,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:61598180..61598190,+ | |||
|coexpression_cluster_id=C1737 | |coexpression_cluster_id=C1737 | ||
|description=CAGE_peak_at_chr17:61598180..61598190,+ | |description=CAGE_peak_at_chr17:61598180..61598190,+ | ||
|id=chr17:61598180..61598190,+ | |id=chr17:61598180..61598190,+ | ||
|ontology_enrichment_celltype=CL:0000242!5.41e-28!2;CL:0000312!8.32e-12!5;CL:0000240!5.43e-10!6;CL:0000311!5.43e-10!6;CL:0000079!5.43e-10!6;CL:0000237!5.43e-10!6;CL:0000036!5.43e-10!6;CL:0000357!5.43e-10!6;CL:0000114!5.43e-10!6;CL:0002535!3.56e-08!2;CL:0000362!1.04e-07!8 | |ontology_enrichment_celltype=CL:0000242!5.41e-28!2;CL:0000312!8.32e-12!5;CL:0000240!5.43e-10!6;CL:0000311!5.43e-10!6;CL:0000079!5.43e-10!6;CL:0000237!5.43e-10!6;CL:0000036!5.43e-10!6;CL:0000357!5.43e-10!6;CL:0000114!5.43e-10!6;CL:0002535!3.56e-08!2;CL:0000362!1.04e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000123;5.22e-79;2!CL:0000242;5.22e-79;2!CL:0000312;1.99e-32;5!CL:0000240;3.11e-27;6!CL:0000311;3.11e-27;6!CL:0000079;3.11e-27;6!CL:0000237;3.11e-27;6!CL:0002535;3.81e-21;2!CL:0000362;1.48e-18;9!CL:0002159;2.51e-12;14!CL:0000095;2.36e-09;17!CL:0002319;7.24e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,5.22e-79,2;CL:0000312,1.99e-32,5;CL:0000240,3.11e-27,6;CL:0000311,3.11e-27,6;CL:0000079,3.11e-27,6;CL:0000237,3.11e-27,6;CL:0000036,3.11e-27,6;CL:0000357,3.11e-27,6;CL:0000114,3.11e-27,6;CL:0002535,3.11e-21,2;CL:0000362,1.48e-18,9;CL:0002159,2.51e-12,14;CL:0000095,2.36e-09,17;CL:0000123,2.36e-09,17;CL:0002319,7.24e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000357;3.11e-27;6!CL:0000114;3.11e-27;6 | |||
|ontology_enrichment_disease=DOID:4362!9.26e-12!5;DOID:3119!2.83e-09!14 | |ontology_enrichment_disease=DOID:4362!9.26e-12!5;DOID:3119!2.83e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:3119;2.37e-12;14!DOID:4362;2.74e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,2.51e-12,14;DOID:4362,2.53e-09,5;DOID:0050687,1.55e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001301!1.61e-14!1;UBERON:0000002!5.94e-10!6;UBERON:0001560!5.94e-10!6;UBERON:0006955!3.56e-08!2;UBERON:0004801!3.56e-08!2 | |ontology_enrichment_uberon=UBERON:0001301!1.61e-14!1;UBERON:0000002!5.94e-10!6;UBERON:0001560!5.94e-10!6;UBERON:0006955!3.56e-08!2;UBERON:0004801!3.56e-08!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0006955;3.81e-21;2!UBERON:0004801;3.81e-21;2!UBERON:0001003;1.42e-11;15!UBERON:0007376;1.42e-11;15!UBERON:0000002;5.92e-08;6!UBERON:0001560;5.92e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,3.11e-21,2;UBERON:0004801,3.11e-21,2;UBERON:0001003,1.42e-11,15;UBERON:0007376,1.42e-11,15;UBERON:0007383,1.42e-11,15;UBERON:0000002,5.54e-08,6;UBERON:0001560,5.54e-08,6 | |||
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|short_description=p@chr17:61598180..61598190,+ | |short_description=p@chr17:61598180..61598190,+ | ||
}} | }} |
Latest revision as of 19:44, 25 July 2015
Short description: | p@chr17:61598180..61598190, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:61598180..61598190, + |
Coexpression cluster: | C1737_argyrophil_merkel_neuroblastoma_gastrointestinal_carcinoid_smallcell_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 5.22e-79 | 2 |
keratinocyte | 1.99e-32 | 5 |
stratified squamous epithelial cell | 3.11e-27 | 6 |
keratin accumulating cell | 3.11e-27 | 6 |
stratified epithelial cell | 3.11e-27 | 6 |
keratinizing barrier epithelial cell | 3.11e-27 | 6 |
epithelial fate stem cell | 3.11e-27 | 6 |
stratified epithelial stem cell | 3.11e-27 | 6 |
surface ectodermal cell | 3.11e-27 | 6 |
epithelial cell of cervix | 3.11e-21 | 2 |
epidermal cell | 1.48e-18 | 9 |
general ecto-epithelial cell | 2.51e-12 | 14 |
neuron associated cell | 2.36e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 2.36e-09 | 17 |
neural cell | 7.24e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 3.11e-21 | 2 |
cervix epithelium | 3.11e-21 | 2 |
skin epidermis | 1.42e-11 | 15 |
outer epithelium | 1.42e-11 | 15 |
enveloping layer of ectoderm | 1.42e-11 | 15 |
uterine cervix | 5.54e-08 | 6 |
neck of organ | 5.54e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 2.51e-12 | 14 |
cervical cancer | 2.53e-09 | 5 |
cell type cancer | 1.55e-07 | 143 |