FFCP PHASE1:Hg19::chr17:61228471..61228510,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:61228471..61228510,+ | |||
|coexpression_cluster_id=C3663 | |||
|description=CAGE_peak_at_chr17:61228471..61228510,+ | |description=CAGE_peak_at_chr17:61228471..61228510,+ | ||
|id=chr17:61228471..61228510,+ | |id=chr17:61228471..61228510,+ | ||
|ontology_enrichment_celltype=CL:0000188!9.76e-09!9 | |ontology_enrichment_celltype=CL:0000188!9.76e-09!9 | ||
|ontology_enrichment_celltype_v019=CL:0000188;9.83e-14;9!CL:0000680;6.67e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,1.22e-13,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.05e-09!86;UBERON:0000073!2.47e-09!94;UBERON:0001016!2.47e-09!94;UBERON:0001017!5.58e-09!82;UBERON:0007023!3.46e-08!115;UBERON:0000924!4.71e-08!173;UBERON:0006601!4.71e-08!173;UBERON:0002346!4.27e-07!90;UBERON:0004121!6.62e-07!169;UBERON:0000153!8.28e-07!129;UBERON:0007811!8.28e-07!129 | |ontology_enrichment_uberon=UBERON:0005743!2.05e-09!86;UBERON:0000073!2.47e-09!94;UBERON:0001016!2.47e-09!94;UBERON:0001017!5.58e-09!82;UBERON:0007023!3.46e-08!115;UBERON:0000924!4.71e-08!173;UBERON:0006601!4.71e-08!173;UBERON:0002346!4.27e-07!90;UBERON:0004121!6.62e-07!169;UBERON:0000153!8.28e-07!129;UBERON:0007811!8.28e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;6.26e-19;16!UBERON:0002036;6.26e-19;16!UBERON:0002385;5.35e-08;31!UBERON:0001015;5.35e-08;31!UBERON:0000383;5.35e-08;31!UBERON:0011135;5.37e-07;5!UBERON:0002216;5.37e-07;5!UBERON:0011134;5.37e-07;5!UBERON:0002209;5.37e-07;5!UBERON:0002213;5.37e-07;5!UBERON:0007844;5.37e-07;5!UBERON:0011138;5.37e-07;5!UBERON:0001130;5.37e-07;5!UBERON:0001066;5.37e-07;5!UBERON:0001468;5.37e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,5.65e-07,5;UBERON:0002216,5.65e-07,5;UBERON:0011134,5.65e-07,5;UBERON:0002209,5.65e-07,5;UBERON:0002213,5.65e-07,5;UBERON:0005856,5.65e-07,5;UBERON:0005866,5.65e-07,5;UBERON:0005863,5.65e-07,5;UBERON:0007844,5.65e-07,5;UBERON:0011138,5.65e-07,5;UBERON:0001130,5.65e-07,5;UBERON:0001066,5.65e-07,5;UBERON:0001468,5.65e-07,5 | |||
|phase1_expression=0,0,0.140954404095971,1.0007329835313,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,3.09415882400117,1.32558950291166,0,0,0,0,0.492484232307152,0.408001382488506,0,0.572471974262113,0.547497700291537,0.125542639594803,0,0,0,0,0,0.309632246632152,0,0,0,0,0.142169232487422,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0,0,0.639337125799041,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573673241497627,0,0,0,0,1.55605517699883,0,0,1.81628913173918,0.576175924479999,0.468642863667593,0,0,0,1.17434498643765,0.323745888736263,0.702254033511242,0.408308342509787,1.10550885580591,0.413303124703062,0,0.247266929278557,0,0,1.34668891163253,3.37820003654303,0,0,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0,0.300091096084402,0.103052529238439,0.257640540045629,0.18611685633159,0.337552664482532,0,1.00973509697646,0.552299391853796,8.72888706821584,1.77504796258307,0.201504196455281,0.339121184620975,0.193260853163297,0,0,0.853815942907168,0,0.813357600086629,2.90250954043037,0.504641701751257,0.36497735907583,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74384027533312,0.07333828582095,0.129271715757778,0,0,0,0,0.514414748524284,0,0,0,0.542621605391443,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,37.0855953105868,0.289562613335158,1.84928690295345,1.79060963239896,0,0,0,0,6.86055485400651,2.60279707715243,0,0.502548796003046,0.637938751653163,0,0,0,4.53958519360818,4.00136416847742,0.271265023699736,1.03985430765404,2.85486382075459,2.68094105557689,6.79420206957737,6.62081419400982,2.27407504055985,1.03473071292505,0.664225598535437,0.553107505625109,1.12948698808508,0.783204629850962,1.71571711905428,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0.154209693802656,0,0.657017248110473,0,0.581051892299796,0,0,0,0.229628896329213,0.546273504020151,1.04899531967539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95227036798582,0,0,0,0,0,0,23.9743381364462,1.54048617114644,2.30255512089194,1.10269257987624,1.28904293841928,2.46528379654188,0.852266274161009,7.30062692303246,0,0.192190067365106,0.255225424989168,0,0,0.31481234683064,0,0,0,0,0,0,0,0.949138274156178,0.190630193923825,1.02359116524534,5.99114583247489,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0,0.848432591722276,2.26016233240486,0,0,0,0.578775534266688,7.87073702455959,0,0,0,0,0,0,2.12856638442359,0.422215270595328,1.64647446479951,1.13841952129715,0.699869440489966,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.996239941255349,0,6.55025144421118,0.102268682502155,0,0,0.0898683511473268,0,0,0.394573622547734,0,0,0.969332746095218,0.185536196323703,0,0.260427761085233,0,0,0,0,0,0,7.87332456134787,1.21537496453305,0,0.120596438625408,0,0,0,0,0,0,1.00035336054936,0,0,0,0,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0,0,0.421996129056054,0,0,0.216388639742091,1.99052386215701,0.0884575645033392,1.22206028986725,0.296521128680622,0,0,0.269604531922708,12.8412423567806,0,0,0,1.94224303627274,0,1.20990716048664,0.30607276163049,3.28570214068137,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.484945082442097,0,2.71176888936639,0,0,0.253243183823515,0.195551382734803,0.0801588202515337,1.49417096317547,0,0,0.114536596165916,0,0,0,0,0,0,0,0.577901179803038,0,0,1.27746588066972,0.429765441419957,0,0.558564802544508,0.458320848023367,0.717873024576814,0,0,0,0.134366944973453,0,0,0,0,0,0,0.338693328263138,0,0.136203406111576,0.160753148465019,0.550157746388935,0,0,0,0,0,0,0.577000469484979,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.26446520348538,0,0,0.213574825135389,0.943225830597996,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0.573409195690071,0.221858103073705,0.124192805882767,1.93688088910723,0,0,0,0,7.49335849291011,1.1593682288866,0.447764408660622,1.16856654923612,2.21922344601045,0.189403005275089,1.50940741051545,1.77962244319307,0,0.453692771289717,0.466311601748341,0,0,0.449803112163605,0.465788870628778,0.414706207840855,0,0,0,0,0,0,0.214821114084977,0,0,2.00013882331577,3.09056134664514,1.6837474438296,0,0,0,0,0,0,0,0.537266523244462,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,1.2288645437686,0,0,0,0,0,0,0,0.622077260032973,26.6020292311595,0,0.157265941855896,0.54604819096007,2.54598794931038,1.06287460050841,0.495743057036009,0,0,0,0,15.8704174660808,0,0.256916900385838,1.41696576325585,0,0,1.76450187355203,0.0691572524642179,0.484426936895553,0,0,0,0,0,0,0,0.198916222116275,1.12815492523886,0,0,0,0,0,0.13507516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| ||
|short_description=p@chr17:61228471..61228510,+ | |short_description=p@chr17:61228471..61228510,+ | ||
}} | }} |
Latest revision as of 19:42, 25 July 2015
Short description: | p@chr17:61228471..61228510, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:61228471..61228510, + |
Coexpression cluster: | C3663_rhabdomyosarcoma_Myoblast_skeletal_neuroblastoma_Skeletal_normal_diaphragm |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 1.22e-13 | 9 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 5.65e-07 | 5 |
symphysis | 5.65e-07 | 5 |
nonsynovial joint | 5.65e-07 | 5 |
fibrous joint | 5.65e-07 | 5 |
cartilaginous joint | 5.65e-07 | 5 |
developing mesenchymal condensation | 5.65e-07 | 5 |
pre-cartilage condensation | 5.65e-07 | 5 |
cartilaginous condensation | 5.65e-07 | 5 |
cartilage element | 5.65e-07 | 5 |
post-cranial axial skeletal system | 5.65e-07 | 5 |
vertebral column | 5.65e-07 | 5 |
intervertebral disk | 5.65e-07 | 5 |
intervertebral joint | 5.65e-07 | 5 |