FFCP PHASE1:Hg19::chr17:58165691..58165709,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:58165691..58165709,- to FFCP PHASE1:Hg19::chr17:58165691..58165709,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-37bp_to_uc002iyl.2_5end | |||
|cluster_id=chr17:58165691..58165709,- | |||
|coexpression_cluster_id=C61 | |||
|description=CAGE_peak_4_at_uc002iyl.2_5end | |||
|id=chr17:58165691..58165709,- | |||
|ontology_enrichment_celltype=CL:0000055!6.39e-13!180;CL:0000680!7.27e-11!57;CL:0000056!7.27e-11!57;CL:0000355!7.27e-11!57;CL:0000548!1.41e-09!679;CL:0000004!1.41e-09!679;CL:0000255!1.41e-09!679;CL:0000012!2.79e-09!682;CL:0000187!3.80e-09!54;CL:0000990!9.38e-09!8;CL:0000393!6.23e-08!60;CL:0000211!6.23e-08!60;CL:0000183!1.37e-07!59;CL:0000057!1.65e-07!75;CL:0000192!1.98e-07!42;CL:0000514!1.98e-07!42;CL:0000453!5.39e-07!5;CL:0000144!5.90e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000990;9.13e-27;8!CL:0000451;1.23e-21;10!CL:0000453;9.74e-20;5!CL:0000840;6.91e-16;5!CL:0000349;2.85e-14;19!CL:0002569;8.92e-10;6!CL:0002536;5.30e-09;2!CL:0001014;1.51e-08;2!CL:0001016;1.51e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000990,4.00e-27,8;CL:0000451,6.32e-22,10;CL:0000453,7.00e-20,5;CL:0000840,3.17e-16,5;CL:0001029,3.17e-16,5;CL:0000349,2.10e-14,19;CL:0002569,4.25e-10,6;CL:0002536,5.80e-09,2;CL:0001014,1.07e-08,2;CL:0001016,1.07e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;3.72e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,1.15e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.30e-11!83;UBERON:0002329!1.30e-11!83;UBERON:0003077!1.30e-11!83;UBERON:0003059!1.30e-11!83;UBERON:0007282!1.30e-11!83;UBERON:0009618!1.30e-11!83;UBERON:0007285!1.30e-11!83;UBERON:0004290!3.06e-10!70;UBERON:0000486!4.18e-10!82;UBERON:0001134!1.88e-09!61;UBERON:0002036!1.88e-09!61;UBERON:0003082!1.88e-09!61;UBERON:0002385!8.00e-09!63;UBERON:0001015!8.00e-09!63;UBERON:0000383!8.00e-09!63;UBERON:0000926!1.04e-08!448;UBERON:0004120!1.04e-08!448;UBERON:0006603!1.04e-08!448;UBERON:0001737!1.50e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003104;1.14e-12;7!UBERON:0009142;1.14e-12;7!UBERON:0000478;6.07e-11;24!UBERON:0003422;8.92e-10;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000478,4.79e-11,24;UBERON:0003422,4.25e-10,6 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.563817616383885,0,0.446961094427288,0.872338524100369,0,0,0,0,0,3.27662058195258,2.11013582582763,0.74259811776028,1.32558950291166,0.672325146451775,0.602694528023977,0,0.487932798790507,0,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0.579386075843295,0,0,0,0,0,0,0,0,4.21911611751088,3.30846500868608,1.72845348674525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,1.49091585508596,0.12663051166458,0.662045904066094,1.43418310374407,0,1.12135520028461,1.06748995729705,1.2333377420858,0.622422070799533,0.269421344139376,0,0,0,0.234321431833797,0.312160076830321,0,0,0.117434498643765,0.161872944368132,0,0,0,0,0,0.247266929278557,0,0,0.336672227908132,0,0,0.438977620880838,0.30648779579902,0,0.226864366320042,0,0.213557388818567,0,0,0.103052529238439,0.257640540045629,0,0.168776332241266,0.194874010322397,0,0.644349290496095,0,0,0.201504196455281,0.339121184620975,0.193260853163297,0,0,0.121973706129595,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0,2.16563844500876,0.946454400318751,0.674338760312407,0.964044119533928,1.98529150918309,0.653638332277218,1.42362371466658,1.34831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40402559083543,1.0404181360211,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0,0,0,0.285955987316295,0,1.64648067356154,0,0.710783897485092,1.58390374586686,0,0,0,0,0,0,1.91699884393266,1.14861935834114,0,0.868687840005475,1.02738161275192,0.716243852959582,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0.271265023699736,0.415941723061614,1.24900292158013,1.26161932027148,0.937131319941706,0,0,1.03473071292505,0,0.184369168541703,0,0,0,0,0.215714200818617,0.106727557803444,0.909382714338778,8.32177197552485,1.5119514666484,0,0.460385919864187,0.280660094433074,0.384417447767103,1.02341449813341,0.482561763430822,1.48418066444991,0.154209693802656,0,0.246381468041427,0.519254429183621,0.464841513839837,0,0,0,0.34444334449382,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0.650060246036521,0,0.096670718292122,0.462145851343933,0,0.413509717453592,0.751941714077915,0.435050081742686,0.340906509664404,0.0890320356467374,0.495854746082934,0,0,0.10115778085555,0,0,0,0,0.532306030317022,0,0.37064843820784,0,0.744316738719335,0,0.762520775695299,0.511795582622668,0.42793898803392,0,0,0.539617372749944,0.274537029736055,0.117812402345686,0.606547444719948,0,0.421258456238981,1.46290121726877,0.487426979262569,0,0.136499911407986,0.141405431953713,0,0,1.99031692572366,0.876901770507525,0.578775534266688,1.9676842561399,0.202910376962704,1.54911749049875,0,0,0.491245205065606,0.35667105148125,0,1.47775344708365,0.329294892959902,0.379473173765715,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0.277349346026277,0,0.0979923974143777,0,0,0,0.387025325156341,0.365446585430928,0,0.387956065953678,0,0,0,0.19871461170299,0,0.195551382734803,0,0,0,0,0,0,0.14405479798815,0.124252535565433,0,0.815425236441684,0.209205692624666,1.12198039399954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275078873194468,0,2.249738915515,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02232813071253,0,0,0,0,0,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0,0,0.189403005275089,0,0.889811221596536,0.457680136793847,0.302461847526478,0.310874401165561,0.73927574994817,0.477890301491107,0,0.155262956876259,0,0,0,0,0.380805212168795,0,0.363697318405119,0.107410557042488,0,0,0.400027764663154,0.343395705182793,1.34699795506368,0,0,0.214441591374926,0.260994291965212,0.226705925512272,0.231522474323834,0.489473409012935,0,0.308801447160972,0,0,0.192914038270915,1.18259708457151,0,1.38172136692479,0,0,13.2505010010784,5.97891781410134,7.36044274151299,0.655219697692825,0.245772908753719,0,0,0,0,1.70254786070051,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,1.76337971845342,0,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.638812138197976,0,0,0,0,0,0,0.171488009437418,0,0,0.118193840883968,0,0,0,0,0,0.215927591218621,0,0,0,0,0,1.60342272946051,0.828864656652147,0.85359238546975,2.76503864725637,0,0,0,0,0,0.31020638566432,0.955538938977433,0.111855431797792,0,0.731507549893617,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0.509781344063451,0.0939839179798536,0,0,0.357107877211315,0,0,0,0,0,0.157771562193185,0,0,0,1.48798007266701,0.462175628631418,1.29787968637137,0,0,0,0.407955318967927,0,0.18378979906969,0,0,0,0,0,0.426467963801962,0,0,0.124149428591716,0,0.0636471582781649,0,1.30630048738177,0,0.0673520530145875,0.286888821570705,0.332660356546013,0,0.320182037633146,1.9307228228694,0.269475606319761,0,0,0,0,0,0 | |phase1_expression=0.54503513781167,0.428201047781966,0.563817616383885,0,0.446961094427288,0.872338524100369,0,0,0,0,0,3.27662058195258,2.11013582582763,0.74259811776028,1.32558950291166,0.672325146451775,0.602694528023977,0,0.487932798790507,0,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0.579386075843295,0,0,0,0,0,0,0,0,4.21911611751088,3.30846500868608,1.72845348674525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,1.49091585508596,0.12663051166458,0.662045904066094,1.43418310374407,0,1.12135520028461,1.06748995729705,1.2333377420858,0.622422070799533,0.269421344139376,0,0,0,0.234321431833797,0.312160076830321,0,0,0.117434498643765,0.161872944368132,0,0,0,0,0,0.247266929278557,0,0,0.336672227908132,0,0,0.438977620880838,0.30648779579902,0,0.226864366320042,0,0.213557388818567,0,0,0.103052529238439,0.257640540045629,0,0.168776332241266,0.194874010322397,0,0.644349290496095,0,0,0.201504196455281,0.339121184620975,0.193260853163297,0,0,0.121973706129595,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0,2.16563844500876,0.946454400318751,0.674338760312407,0.964044119533928,1.98529150918309,0.653638332277218,1.42362371466658,1.34831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40402559083543,1.0404181360211,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0,0,0,0.285955987316295,0,1.64648067356154,0,0.710783897485092,1.58390374586686,0,0,0,0,0,0,1.91699884393266,1.14861935834114,0,0.868687840005475,1.02738161275192,0.716243852959582,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0.271265023699736,0.415941723061614,1.24900292158013,1.26161932027148,0.937131319941706,0,0,1.03473071292505,0,0.184369168541703,0,0,0,0,0.215714200818617,0.106727557803444,0.909382714338778,8.32177197552485,1.5119514666484,0,0.460385919864187,0.280660094433074,0.384417447767103,1.02341449813341,0.482561763430822,1.48418066444991,0.154209693802656,0,0.246381468041427,0.519254429183621,0.464841513839837,0,0,0,0.34444334449382,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0.650060246036521,0,0.096670718292122,0.462145851343933,0,0.413509717453592,0.751941714077915,0.435050081742686,0.340906509664404,0.0890320356467374,0.495854746082934,0,0,0.10115778085555,0,0,0,0,0.532306030317022,0,0.37064843820784,0,0.744316738719335,0,0.762520775695299,0.511795582622668,0.42793898803392,0,0,0.539617372749944,0.274537029736055,0.117812402345686,0.606547444719948,0,0.421258456238981,1.46290121726877,0.487426979262569,0,0.136499911407986,0.141405431953713,0,0,1.99031692572366,0.876901770507525,0.578775534266688,1.9676842561399,0.202910376962704,1.54911749049875,0,0,0.491245205065606,0.35667105148125,0,1.47775344708365,0.329294892959902,0.379473173765715,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0.277349346026277,0,0.0979923974143777,0,0,0,0.387025325156341,0.365446585430928,0,0.387956065953678,0,0,0,0.19871461170299,0,0.195551382734803,0,0,0,0,0,0,0.14405479798815,0.124252535565433,0,0.815425236441684,0.209205692624666,1.12198039399954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275078873194468,0,2.249738915515,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02232813071253,0,0,0,0,0,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0,0,0.189403005275089,0,0.889811221596536,0.457680136793847,0.302461847526478,0.310874401165561,0.73927574994817,0.477890301491107,0,0.155262956876259,0,0,0,0,0.380805212168795,0,0.363697318405119,0.107410557042488,0,0,0.400027764663154,0.343395705182793,1.34699795506368,0,0,0.214441591374926,0.260994291965212,0.226705925512272,0.231522474323834,0.489473409012935,0,0.308801447160972,0,0,0.192914038270915,1.18259708457151,0,1.38172136692479,0,0,13.2505010010784,5.97891781410134,7.36044274151299,0.655219697692825,0.245772908753719,0,0,0,0,1.70254786070051,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,1.76337971845342,0,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.638812138197976,0,0,0,0,0,0,0.171488009437418,0,0,0.118193840883968,0,0,0,0,0,0.215927591218621,0,0,0,0,0,1.60342272946051,0.828864656652147,0.85359238546975,2.76503864725637,0,0,0,0,0,0.31020638566432,0.955538938977433,0.111855431797792,0,0.731507549893617,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0.509781344063451,0.0939839179798536,0,0,0.357107877211315,0,0,0,0,0,0.157771562193185,0,0,0,1.48798007266701,0.462175628631418,1.29787968637137,0,0,0,0.407955318967927,0,0.18378979906969,0,0,0,0,0,0.426467963801962,0,0,0.124149428591716,0,0.0636471582781649,0,1.30630048738177,0,0.0673520530145875,0.286888821570705,0.332660356546013,0,0.320182037633146,1.9307228228694,0.269475606319761,0,0,0,0,0,0 | ||
|short_description=p4@uc002iyl.2 | |||
}} | }} |
Latest revision as of 19:31, 25 July 2015
Short description: | p4@uc002iyl.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_uc002iyl.2_5end |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | -37bp_to_uc002iyl.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
conventional dendritic cell | 4.00e-27 | 8 |
dendritic cell | 6.32e-22 | 10 |
Langerhans cell | 7.00e-20 | 5 |
immature conventional dendritic cell | 3.17e-16 | 5 |
common dendritic progenitor | 3.17e-16 | 5 |
extraembryonic cell | 2.10e-14 | 19 |
mesenchymal stem cell of umbilical cord | 4.25e-10 | 6 |
amniotic epithelial cell | 5.80e-09 | 2 |
CD1a-positive Langerhans cell | 1.07e-08 | 2 |
immature CD1a-positive Langerhans cell | 1.07e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic structure | 4.79e-11 | 24 |
mesenchyme of umbilical cord | 4.25e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
teratoma | 1.15e-08 | 2 |