FFCP PHASE1:Hg19::chr17:57785324..57785365,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:57785324..57785365,+
|short_description=p@chr17:57785324..57785365,+
|description=CAGE_peak_at_chr17:57785324..57785365,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:57785324..57785365,+ | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_at_chr17:57785324..57785365,+ | |||
|id=chr17:57785324..57785365,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.58e-15!42;CL:0000860!1.84e-13!45;CL:0000766!2.18e-10!76;CL:0000839!1.15e-08!70;CL:0000557!1.88e-08!71;CL:0002194!1.32e-07!63;CL:0000576!1.32e-07!63;CL:0000040!1.32e-07!63;CL:0000559!1.32e-07!63;CL:0000738!2.72e-07!140;CL:0002009!3.35e-07!65;CL:0000775!5.93e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000775;1.47e-146;3!CL:0000094;8.04e-56;8!CL:0000081;6.14e-41;11!CL:0000138;1.22e-09;6!CL:0000153;7.48e-07;9!CL:0000447;7.48e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.47e-146,3;CL:0000094,8.04e-56,8;CL:0000081,6.14e-41,11;CL:0000058,1.22e-09,6;CL:0000138,1.22e-09,6;CL:0000766,5.71e-07,72;CL:0000153,7.48e-07,9;CL:0000447,7.48e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;1.46e-50;1!DOID:4549;1.46e-50;1!DOID:5861;1.46e-50;1!DOID:6496;1.46e-50;1!DOID:201;1.22e-09;6!DOID:0060100;1.22e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.46e-50,1;DOID:4549,1.46e-50,1;DOID:5861,1.46e-50,1;DOID:6496,1.46e-50,1;DOID:201,1.22e-09,6;DOID:0060100,1.22e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0002371!8.59e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;6.76e-18;3!UBERON:0004755;6.76e-18;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,6.76e-18,3;UBERON:0004755,6.76e-18,3 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0.434021741431704,0,0,0,0.145398238779565,0,0.242584061187816,0,0,0.309706370895104,0.863077176966451,0.256160706529101,0.236482229888585,0.689491361473237,0.645484683583826,0,0.188242339542605,0,0.449446968890169,0.306083892370903,0.320929027076094,0,0,0.199463657621632,0.852449501065388,0.290209238628584,0.56738522469114,0,0.75374599577023,0.521482918420201,0,0,0,0.632924774881769,0,0.425208599930087,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0.534880391567015,0,0,0,0,0.361439152384566,0,0,0,0.973269740605272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0.168776332241266,0,0.252433774244115,0,0,0.355009592516614,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0.207328115540772,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0,0,0,0,0,0,1.49801404789436,2.99161459204025,1.24324654030811,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0,0,0,0,0,0,0,0,0,0.321707842287215,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0.113942055847001,0,0,0.108647371922008,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0.0884575645033392,0,0.296521128680622,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0.60129367765797,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,9.88468618944803,0.451961481561065,0.137041924646751,0,0,0,0,0,0.19980960958213,0,0.343609788497747,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0.25426853765475,0,0,0.326587360109409,0,0.082092520749339,0.340776043570843,0,0.146552233678082,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.18628920882415,0,0,0,0.285465333544967,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0.398095888698616,0.400027764663154,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0.127894371303652,0.215649622793364,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.207471757392654,0.161475645631851,0,0,0.11796972334774,0,0.115525666150338,0,0,0,0,0,0,0,0,0.147856086217045,0.202612753855184,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0.111231401892069,0,0,0,0,0,0,0,0.316027223465453,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0.22589216407792,0,0,0.308696632431779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0.213454691755431,0,0.269475606319761,0,0,0,0,0,0 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| ||
|short_description=p@chr17:57785324..57785365,+ | |||
}} | }} |
Latest revision as of 19:27, 25 July 2015
Short description: | p@chr17:57785324..57785365, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:57785324..57785365, + |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.47e-146 | 3 |
granulocyte | 8.04e-56 | 8 |
blood cell | 6.14e-41 | 11 |
chondroblast | 1.22e-09 | 6 |
chondrocyte | 1.22e-09 | 6 |
myeloid leukocyte | 5.71e-07 | 72 |
GAG secreting cell | 7.48e-07 | 9 |
carbohydrate secreting cell | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 6.76e-18 | 3 |
skeletal tissue | 6.76e-18 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.46e-50 | 1 |
extraosseous chondrosarcoma | 1.46e-50 | 1 |
myxoid chondrosarcoma | 1.46e-50 | 1 |
extraskeletal myxoid chondrosarcoma | 1.46e-50 | 1 |
connective tissue cancer | 1.22e-09 | 6 |
musculoskeletal system cancer | 1.22e-09 | 6 |