FFCP PHASE1:Hg19::chr17:48266543..48266569,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:48266543..48266569,+ | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_at_chr17:48266543..48266569,+ | |||
|id=chr17:48266543..48266569,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.93e-31!180;CL:0000057!8.36e-26!75;CL:0000048!2.44e-15!430;CL:0000723!1.83e-14!436;CL:0000034!1.03e-13!444;CL:0000144!2.93e-13!625;CL:0002371!1.96e-12!591;CL:0000183!1.40e-11!59;CL:0000680!2.89e-11!57;CL:0000056!2.89e-11!57;CL:0000355!2.89e-11!57;CL:0000187!7.41e-11!54;CL:0002320!5.45e-10!365;CL:0002334!8.52e-09!12;CL:0000393!1.12e-08!60;CL:0000211!1.12e-08!60;CL:0002620!2.93e-08!23;CL:0000548!4.04e-08!679;CL:0000004!4.04e-08!679;CL:0000255!4.04e-08!679;CL:0000134!4.28e-08!358;CL:0000012!7.98e-08!682;CL:0000192!1.62e-07!42;CL:0000514!1.62e-07!42;CL:0002570!5.27e-07!8;CL:0000219!8.15e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0002334;6.96e-11;12!CL:0000057;7.22e-10;73!CL:0002569;3.78e-09;6!CL:0000134;5.63e-09;55!CL:0000048;1.17e-08;58!CL:0000499;2.02e-08;28!CL:0002320;2.25e-08;188!CL:0002570;8.55e-08;8!CL:0000723;1.25e-07;61!CL:0000349;4.30e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.38e-26,76;CL:0000048,3.86e-15,427;CL:0000723,1.63e-14,433;CL:0000034,1.03e-13,441;CL:0002320,2.64e-13,361;CL:0000134,9.14e-12,354;CL:0002334,6.07e-11,12;CL:0000219,4.20e-10,386;CL:0002569,2.66e-09,6;CL:0000499,2.02e-08,28;CL:0002570,7.18e-08,8;CL:0000349,2.56e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.80e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.77e-13!83;UBERON:0002329!4.77e-13!83;UBERON:0003077!4.77e-13!83;UBERON:0003059!4.77e-13!83;UBERON:0007282!4.77e-13!83;UBERON:0009618!4.77e-13!83;UBERON:0007285!4.77e-13!83;UBERON:0001134!1.82e-11!61;UBERON:0002036!1.82e-11!61;UBERON:0003082!1.82e-11!61;UBERON:0004290!5.43e-11!70;UBERON:0002385!1.04e-10!63;UBERON:0001015!1.04e-10!63;UBERON:0000383!1.04e-10!63;UBERON:0002384!5.36e-10!375;UBERON:0000486!1.79e-09!82;UBERON:0002199!1.24e-07!45;UBERON:0002416!1.24e-07!45;UBERON:0001013!1.89e-07!14;UBERON:0003102!2.63e-07!95;UBERON:0005256!7.10e-07!143;UBERON:0003688!9.73e-07!6;UBERON:0002358!9.73e-07!6;UBERON:0003684!9.73e-07!6;UBERON:0001178!9.73e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003104;1.49e-10;7!UBERON:0009142;1.49e-10;7!UBERON:0004457;2.33e-10;9!UBERON:0000042;2.33e-10;9!UBERON:0003688;1.64e-09;6!UBERON:0002358;1.64e-09;6!UBERON:0003684;1.64e-09;6!UBERON:0001178;1.64e-09;6!UBERON:0003422;3.78e-09;6!UBERON:0002384;4.32e-08;198!UBERON:0002331;5.24e-07;10!UBERON:0001013;6.67e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.07e-13,371;UBERON:0003688,2.29e-09,6;UBERON:0002358,2.29e-09,6;UBERON:0003684,2.29e-09,6;UBERON:0001178,2.29e-09,6;UBERON:0003422,2.66e-09,6;UBERON:0004457,3.37e-07,12;UBERON:0000042,3.37e-07,12;UBERON:0002331,4.15e-07,10;UBERON:0000358,4.15e-07,10;UBERON:0000307,4.15e-07,10;UBERON:0000091,4.15e-07,10;UBERON:0000087,4.15e-07,10;UBERON:0007010,4.15e-07,10;UBERON:0007806,4.15e-07,10;UBERON:0008780,4.15e-07,10;UBERON:0005728,4.15e-07,10;UBERON:0001013,6.08e-07,14 | |||
|phase1_expression=1.63510541343501,2.78330681058278,2.39622486963151,3.00219895059391,8.04529969969118,6.10636966870258,5.06599756336621,0.631719873426831,0.261185628199839,0,0,0.218441372130172,1.84636884759917,0.866364470720326,0.994192127183747,0,1.20538905604795,0,0.975865597581014,0.492484232307152,1.83600622119828,1.88072832886853,0.286235987131057,0,0.251085279189606,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,0.639312809217652,2.89151321907653,0,3.0417768981773,0,1.45990461090791,0,0.665188192387692,0.702678285545008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4364109856017,1.2663051166458,1.05927344650575,12.0471380714502,1.06400514659507,1.68203280042692,2.1349799145941,5.18001851676036,0,1.0776853765575,0.980771418680752,0.605429710579726,1.72852777344,0,0,0,0.597794722207204,0,0,0.140450806702248,0.408308342509787,0.368502951935304,0.103325781175765,2.37600571456411,7.41800787835671,1.82032272387605,5.74894513452991,0,0.250237039743928,0,0.438977620880838,2.14541457059314,2.55404700141215,1.24775401476023,4.84352016359927,2.56268866582281,0.635795703478686,7.50227740211006,1.03052529238439,6.95629458123199,1.30281799432113,3.03797398034279,1.16924406193438,7.06814567883521,1.65689817556139,1.61646056818812,12.4253357380815,0.403008392910561,0.339121184620975,0,0.272746120590835,0,0,0,0,0,0.252320850875628,0,1.56449532329816,0.643240938192885,0,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0,0,0,0,5.60967095213783,4.5273141246454,16.1709582524096,0,0,0,0,0,1.02940686179115,0,0,0,0,0,3.11980435583874,1.44331342025273,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.87192013766656,0.4400297149257,1.80980402060889,3.57656445851882,0.845302752556,2.6593811658487,2.08014873822732,0,1.41849132023278,0.532844358032199,3.28849385413739,10.8524321078289,2.46972101034231,1.62868092146868,4.6200953336531,2.37585561880029,0,0,0.199945982364114,0,0,0,5.27174682081482,13.7834323000937,0,0.579125226670317,1.43833425785268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,3.00102312635806,2.17012018959788,7.90289273817067,8.92144943985809,6.93890626149313,1.40569697991256,0.601892199455438,0,1.03473071292505,1.32845119707087,0.368738337083406,1.04260337361699,1.56640925970192,4.46086450954113,0,0,0,0,1.66435439510497,3.32629322662648,3.2254015016441,2.60885354589706,12.9103643439214,4.74114852246094,2.04682899626681,11.7423362434833,0,2.62156479464514,3.9063579568888,0.739144404124282,1.55776328755086,1.16210378459959,0,0,0,1.26295892981067,3.09554985611419,2.49136388422906,0,0,0,0,0,0,0,0,0,0,1.00337954770971,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0.0915694648183434,0.41254749960294,0,0,3.21367859688319,1.06337790121334,0.924291702687866,0.614014698904518,0.689182862422653,0.859361958946189,1.0151168573996,0.511359764496605,4.98579399621729,0.165284915360978,0,0.127612712494584,0,1.39453664789186,12.5924938732256,0,0.308033580176089,0,0,0,0,0.744316738719335,0.316379424718726,4.00323407240032,0.767693373934002,0,0.318203247925937,0.78494864019923,1.07923474549989,1.09814811894422,1.7671860351853,0,3.17020642346017,0,0.48763373908959,0.731140468893853,0,2.45699840534374,2.54529777516683,1.13008116620243,0,0.66343897524122,0,1.15755106853338,1.31178950409327,0,0.30982349809975,0.281695602532241,1.43411352204052,2.06322986127554,0,0.354761064070598,2.11107635297664,3.95153871551882,0,1.04980416073495,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17727711363265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0.0897576444097721,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40773294189637,0,0,0,0,0,2.41981432097328,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0.0967563312890851,0,0,0,0,2.48578814858586,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0.268733889946905,1.80149941771202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0.653174720218818,0,0,1.36310417428337,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.13435086062435,3.97312626740282,1.10961172300523,0.189403005275089,2.26411111577318,0,0.457680136793847,1.96600200892211,2.64243240990727,0.73927574994817,1.27437413730962,0.899606224327209,0.931577741257556,0.414706207840855,1.86089200190596,2.08698024724694,5.10875870590543,1.90402606084398,0.406870733204662,1.09109195521536,1.50374779859484,0.464033759878494,0.796191777397232,0.400027764663154,2.06037423109676,1.6837474438296,0,0,0,0,0.680117776536817,0.231522474323834,0.244736704506468,0.179088841081487,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| |||
|short_description=p@chr17:48266543..48266569,+ | |||
}} |
Latest revision as of 18:34, 25 July 2015
Short description: | p@chr17:48266543..48266569, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48266543..48266569, + |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.38e-26 | 76 |
multi fate stem cell | 3.86e-15 | 427 |
somatic stem cell | 1.63e-14 | 433 |
stem cell | 1.03e-13 | 441 |
connective tissue cell | 2.64e-13 | 361 |
mesenchymal cell | 9.14e-12 | 354 |
preadipocyte | 6.07e-11 | 12 |
motile cell | 4.20e-10 | 386 |
mesenchymal stem cell of umbilical cord | 2.66e-09 | 6 |
stromal cell | 2.02e-08 | 28 |
mesenchymal stem cell of adipose | 7.18e-08 | 8 |
extraembryonic cell | 2.56e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.07e-13 | 371 |
omentum | 2.29e-09 | 6 |
peritoneum | 2.29e-09 | 6 |
abdominal cavity | 2.29e-09 | 6 |
visceral peritoneum | 2.29e-09 | 6 |
mesenchyme of umbilical cord | 2.66e-09 | 6 |
cavity lining | 3.37e-07 | 12 |
serous membrane | 3.37e-07 | 12 |
umbilical cord | 4.15e-07 | 10 |
blastocyst | 4.15e-07 | 10 |
blastula | 4.15e-07 | 10 |
bilaminar disc | 4.15e-07 | 10 |
inner cell mass | 4.15e-07 | 10 |
cleaving embryo | 4.15e-07 | 10 |
connecting stalk | 4.15e-07 | 10 |
inner cell mass derived epiblast | 4.15e-07 | 10 |
extraembryonic mesoderm | 4.15e-07 | 10 |
adipose tissue | 6.08e-07 | 14 |