FFCP PHASE1:Hg19::chr17:48261749..48261844,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:48261749..48261844,-
|short_description=p@chr17:48261749..48261844,-
|description=CAGE_peak_at_chr17:48261749..48261844,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:48261749..48261844,- | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_at_chr17:48261749..48261844,- | |||
|id=chr17:48261749..48261844,- | |||
|ontology_enrichment_celltype=CL:0000055!3.65e-40!180;CL:0000057!1.34e-22!75;CL:0000183!1.77e-17!59;CL:0000680!1.09e-16!57;CL:0000056!1.09e-16!57;CL:0000355!1.09e-16!57;CL:0000187!4.00e-16!54;CL:0000393!1.72e-15!60;CL:0000211!1.72e-15!60;CL:0000192!1.95e-12!42;CL:0000514!1.95e-12!42;CL:0000359!1.02e-08!32;CL:0000222!2.21e-08!119;CL:0002334!4.23e-08!12;CL:0002620!1.10e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000134;1.47e-10;55!CL:0000187;3.29e-10;55!CL:0000192;9.94e-10;43!CL:0000723;1.38e-09;61!CL:0000057;1.40e-09;73!CL:0000048;2.15e-09;58!CL:0000393;6.09e-09;61!CL:0000211;6.09e-09;61!CL:0000359;7.71e-09;32!CL:0002320;1.09e-08;188!CL:0002334;1.15e-08;12!CL:0002620;3.05e-08;23!CL:0000349;8.90e-08;19!CL:0000499;1.50e-07;28!CL:0000034;2.17e-07;69!CL:0000327;8.46e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.49e-24,76;CL:0000680,2.74e-18,58;CL:0000056,2.74e-18,58;CL:0000355,2.74e-18,58;CL:0000187,1.12e-17,55;CL:0000393,1.40e-16,61;CL:0000211,1.40e-16,61;CL:0000192,1.16e-13,43;CL:0000514,1.16e-13,43;CL:0000048,3.67e-11,427;CL:0000723,2.78e-10,433;CL:0000034,8.03e-10,441;CL:0000222,2.39e-09,121;CL:0000359,2.49e-09,32;CL:0002334,1.16e-08,12;CL:0002620,3.28e-08,23;CL:0000349,8.70e-08,19;CL:0000499,1.53e-07,28;CL:0000327,8.17e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000355;5.57e-10;58!CL:0000514;9.94e-10;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!8.09e-20!83;UBERON:0002329!8.09e-20!83;UBERON:0003077!8.09e-20!83;UBERON:0003059!8.09e-20!83;UBERON:0007282!8.09e-20!83;UBERON:0009618!8.09e-20!83;UBERON:0007285!8.09e-20!83;UBERON:0004290!1.14e-17!70;UBERON:0001134!6.40e-17!61;UBERON:0002036!6.40e-17!61;UBERON:0003082!6.40e-17!61;UBERON:0005256!6.51e-17!143;UBERON:0002385!9.16e-17!63;UBERON:0001015!9.16e-17!63;UBERON:0000383!9.16e-17!63;UBERON:0000486!5.36e-15!82;UBERON:0002100!7.17e-13!216;UBERON:0000475!8.98e-13!365;UBERON:0000481!1.89e-10!347;UBERON:0003104!1.01e-09!238;UBERON:0009142!1.01e-09!238;UBERON:0000468!2.01e-08!659;UBERON:0004872!1.19e-07!84;UBERON:0000490!1.52e-07!138;UBERON:0003102!3.40e-07!95;UBERON:0000478!6.26e-07!24;UBERON:0001013!9.25e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;9.37e-09;198!UBERON:0002385;4.09e-08;31!UBERON:0001015;4.09e-08;31!UBERON:0000383;4.09e-08;31!UBERON:0001013;3.64e-07;14!UBERON:0002204;6.79e-07;70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,7.29e-20,78;UBERON:0002329,1.74e-19,71;UBERON:0003059,1.74e-19,71;UBERON:0007282,1.74e-19,71;UBERON:0004290,1.74e-19,71;UBERON:0009618,1.74e-19,71;UBERON:0007524,2.12e-19,73;UBERON:0003077,8.13e-19,72;UBERON:0007285,8.13e-19,72;UBERON:0001134,1.13e-18,62;UBERON:0002036,1.13e-18,62;UBERON:0003082,1.13e-18,62;UBERON:0002385,1.67e-18,64;UBERON:0001015,1.67e-18,64;UBERON:0000383,1.67e-18,64;UBERON:0003104,2.47e-16,160;UBERON:0009142,2.47e-16,160;UBERON:0005256,9.73e-16,122;UBERON:0000486,1.04e-15,83;UBERON:0002100,1.95e-10,199;UBERON:0004872,1.05e-08,83;UBERON:0000490,1.07e-08,148;UBERON:0003102,1.41e-07,99;UBERON:0002199,1.73e-07,46;UBERON:0002416,1.73e-07,46;UBERON:0000926,3.07e-07,315;UBERON:0004120,3.07e-07,315;UBERON:0006603,3.07e-07,315;UBERON:0001013,3.30e-07,14 | |||
|phase1_expression=745.608068526364,515.339961005596,870.11153648443,581.425863431688,943.981831430432,468.445787441898,534.462742935135,32.8494334181952,7.83556884599516,16.2184398090996,13.2582221914761,44.7804812866853,216.025155169103,31.807952710732,85.5005229378023,98.1594713819592,69.3098707227573,50.3913962367288,82.9485757943862,74.3651190783799,136.476462442405,237.912133601869,24.0438229190088,19.7099172104953,30.3813187819423,0.916960868975415,0.656804715599566,0.236132343941038,0,0,2.32224184974114,0,0.90361775633475,1.10926203050036,0,0.426507697462265,0,5.53995408531877,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,138.969913798958,205.905163929016,341.009452436695,572.881056529538,270.221133832744,300.556526843709,189.278055398162,155.723158496843,40.9335758320414,196.230516754369,82.6525333372316,5.95954793514592,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42306505074684,1.67360306382335,0,0,1.22031028774085,0,5.67099363517232,0,0.22452937262617,0,0,0,1.09921046358244,0,0,0.872188104285069,1811.46276392944,155.249007300775,91.2299255803078,420.215649397012,141.867352879343,117.181618429742,127.031304918349,983.463515539217,37.0341132125722,77.72805778421,53.2885804149875,272.140654905587,365.871712044799,12.4190358871912,7.17968176709737,1.1409436430889,17.4854956245607,11.2737118698014,9.71237666208789,12.3596709897979,23.4777296943127,23.7070232411712,7.95608515053394,438.373054337078,781.858030378797,52.7893589924055,377.274524453525,29.4588199419616,14.138392745532,4.15596173226274,333.184014248556,352.460965168873,315.349685644947,96.0770591365378,202.710288328414,443.772253964983,325.315468279927,315.095650888622,230.425455377149,171.330959130343,232.459953558156,484.388073532434,216.2127144527,121.925512959907,445.613559327371,126.407216432311,303.178192009189,165.535697388013,70.8763275857838,1.15956511897978,6.2731607735892,0.286804595389004,1.95157929807353,0.530119073285941,3.36962434321603,5.28671380578389,4.28945446488568,0.36497735907583,42.2413737290503,529.387292132745,5.52539685409922,90.5517459662359,129.938306700525,0.354920400119532,0.337169380156203,0.241011029883482,1.21323370005633,1.08939722046203,0.474541238222193,0.134831308160164,0.784885860501384,0.38474715694639,3.69077727312324,239.813433203892,609.129536770472,760.035037863252,0,0,8.86184860022106,0,0,71.8869125150822,1.31700342490351,0,0,0.277765335475589,18.8968817079988,44.7171957670219,88.0421186354167,13.3319965721338,210.631197459064,4.47535988059329,0.925971025153221,0.190254152234598,0,0,0,0,0,6.56136837907439,7.72717789714754,1.98485136139341,0.0895585227028483,0,2.68367875415648,0,0.088048434013226,2.07328115540772,0.576479813667846,1.64115163454294,1.20645999155121,0,0,25.6608669034058,5.86116708408944,0,0,45.6373513285618,105.502336657654,72.1648732478148,557.936725210569,185.981351842979,250.209614756576,246.524634074175,165.371824689072,91.8230326115847,106.386849017459,70.8682996182824,495.132792038165,1801.50372989959,274.962272484777,266.126462567981,554.056048089629,341.331257234308,58.1777997725001,68.8511432294232,25.6930587337887,0,0,0,570.78640578095,707.549524738142,17.1164286048862,46.7643620536281,79.9302894720991,27.0382054492242,0,0,0,0,1.52456774533478,2.60279707715243,2.31986643833309,5.52803675603351,4.46557126157214,0,0,0,30.4274899463467,48.5165405427887,75.4116765885265,1698.08208439904,1049.34088311611,594.695807092968,391.369467490655,181.169552036087,184.200078285348,115.889839847606,375.951688771057,93.8439067877269,41.0090660289351,262.960954472461,703.787162236065,0,0,0,65.7786830038383,757.281249772762,293.923365116449,1117.22945860795,894.683304269404,1594.99131666316,1242.05277373551,495.332617096569,1310.31604163583,422.991489368224,211.267280509638,446.745300887828,149.225042477091,130.332861725089,236.023278652177,0.120859449591622,6.41620704970512,0,207.010450040786,204.67047283955,83.2640034992343,0,1.23224539367064,10.1965469992991,5.84556898613043,2.42768746453614,4.54933536283586,0.340187410553031,21.5915916102139,20.0495428497376,97.2697710782432,175.591420849199,0,0,7.16399215110971,0,0,1.02580050046556,14.1046297650873,3.25378394664303,4.43076350085206,28.8443814177782,21.6174889791941,9.18824860793876,1.95018073810956,493.29966462157,64.8660519740138,65.0085164223799,89.3391386906074,79.3938657510896,97.6450025852607,140.231143015059,41.0792344145606,999.117504027687,4.46269271474641,10.9548338398111,2.55225424989168,0.50578890427775,89.2503454650789,304.423539385229,13.2437081330514,49.9014399885264,47.3752366982149,9.5692629128258,30.3931719330429,12.7381149200372,114.996936132137,135.410393779615,245.531689773886,112.595028176987,90.7230654631911,46.7758774451127,70.6453776179307,230.05687324906,356.074527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|phase1_expression=745.608068526364,515.339961005596,870.11153648443,581.425863431688,943.981831430432,468.445787441898,534.462742935135,32.8494334181952,7.83556884599516,16.2184398090996,13.2582221914761,44.7804812866853,216.025155169103,31.807952710732,85.5005229378023,98.1594713819592,69.3098707227573,50.3913962367288,82.9485757943862,74.3651190783799,136.476462442405,237.912133601869,24.0438229190088,19.7099172104953,30.3813187819423,0.916960868975415,0.656804715599566,0.236132343941038,0,0,2.32224184974114,0,0.90361775633475,1.10926203050036,0,0.426507697462265,0,5.53995408531877,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,138.969913798958,205.905163929016,341.009452436695,572.881056529538,270.221133832744,300.556526843709,189.278055398162,155.723158496843,40.9335758320414,196.230516754369,82.6525333372316,5.95954793514592,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42306505074684,1.67360306382335,0,0,1.22031028774085,0,5.67099363517232,0,0.22452937262617,0,0,0,1.09921046358244,0,0,0.872188104285069,1811.46276392944,155.249007300775,91.2299255803078,420.215649397012,141.867352879343,117.181618429742,127.031304918349,983.463515539217,37.0341132125722,77.72805778421,53.2885804149875,272.140654905587,365.871712044799,12.4190358871912,7.17968176709737,1.1409436430889,17.4854956245607,11.2737118698014,9.71237666208789,12.3596709897979,23.4777296943127,23.7070232411712,7.95608515053394,438.373054337078,781.858030378797,52.7893589924055,377.274524453525,29.4588199419616,14.138392745532,4.15596173226274,333.184014248556,352.460965168873,315.349685644947,96.0770591365378,202.710288328414,443.772253964983,325.315468279927,315.095650888622,230.425455377149,171.330959130343,232.459953558156,484.388073532434,216.2127144527,121.925512959907,445.613559327371,126.407216432311,303.178192009189,165.535697388013,70.8763275857838,1.15956511897978,6.2731607735892,0.286804595389004,1.95157929807353,0.530119073285941,3.36962434321603,5.28671380578389,4.28945446488568,0.36497735907583,42.2413737290503,529.387292132745,5.52539685409922,90.5517459662359,129.938306700525,0.354920400119532,0.337169380156203,0.241011029883482,1.21323370005633,1.08939722046203,0.474541238222193,0.134831308160164,0.784885860501384,0.38474715694639,3.69077727312324,239.813433203892,609.129536770472,760.035037863252,0,0,8.86184860022106,0,0,71.8869125150822,1.31700342490351,0,0,0.277765335475589,18.8968817079988,44.7171957670219,88.0421186354167,13.3319965721338,210.631197459064,4.47535988059329,0.925971025153221,0.190254152234598,0,0,0,0,0,6.56136837907439,7.72717789714754,1.98485136139341,0.0895585227028483,0,2.68367875415648,0,0.088048434013226,2.07328115540772,0.576479813667846,1.64115163454294,1.20645999155121,0,0,25.6608669034058,5.86116708408944,0,0,45.6373513285618,105.502336657654,72.1648732478148,557.936725210569,185.981351842979,250.209614756576,246.524634074175,165.371824689072,91.8230326115847,106.386849017459,70.8682996182824,495.132792038165,1801.50372989959,274.962272484777,266.126462567981,554.056048089629,341.331257234308,58.1777997725001,68.8511432294232,25.6930587337887,0,0,0,570.78640578095,707.549524738142,17.1164286048862,46.7643620536281,79.9302894720991,27.0382054492242,0,0,0,0,1.52456774533478,2.60279707715243,2.31986643833309,5.52803675603351,4.46557126157214,0,0,0,30.4274899463467,48.5165405427887,75.4116765885265,1698.08208439904,1049.34088311611,594.695807092968,391.369467490655,181.169552036087,184.200078285348,115.889839847606,375.951688771057,93.8439067877269,41.0090660289351,262.960954472461,703.787162236065,0,0,0,65.7786830038383,757.281249772762,293.923365116449,1117.22945860795,894.683304269404,1594.99131666316,1242.05277373551,495.332617096569,1310.31604163583,422.991489368224,211.267280509638,446.745300887828,149.225042477091,130.332861725089,236.023278652177,0.120859449591622,6.41620704970512,0,207.010450040786,204.67047283955,83.2640034992343,0,1.23224539367064,10.1965469992991,5.84556898613043,2.42768746453614,4.54933536283586,0.340187410553031,21.5915916102139,20.0495428497376,97.2697710782432,175.591420849199,0,0,7.16399215110971,0,0,1.02580050046556,14.1046297650873,3.25378394664303,4.43076350085206,28.8443814177782,21.6174889791941,9.18824860793876,1.95018073810956,493.29966462157,64.8660519740138,65.0085164223799,89.3391386906074,79.3938657510896,97.6450025852607,140.231143015059,41.0792344145606,999.117504027687,4.46269271474641,10.9548338398111,2.55225424989168,0.50578890427775,89.2503454650789,304.423539385229,13.2437081330514,49.9014399885264,47.3752366982149,9.5692629128258,30.3931719330429,12.7381149200372,114.996936132137,135.410393779615,245.531689773886,112.595028176987,90.7230654631911,46.7758774451127,70.6453776179307,230.05687324906,356.074527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| ||
|short_description=p@chr17:48261749..48261844,- | |||
}} | }} |
Latest revision as of 18:29, 25 July 2015
Short description: | p@chr17:48261749..48261844, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48261749..48261844, - |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.49e-24 | 76 |
muscle precursor cell | 2.74e-18 | 58 |
myoblast | 2.74e-18 | 58 |
multi-potent skeletal muscle stem cell | 2.74e-18 | 58 |
muscle cell | 1.12e-17 | 55 |
electrically responsive cell | 1.40e-16 | 61 |
electrically active cell | 1.40e-16 | 61 |
smooth muscle cell | 1.16e-13 | 43 |
smooth muscle myoblast | 1.16e-13 | 43 |
multi fate stem cell | 3.67e-11 | 427 |
somatic stem cell | 2.78e-10 | 433 |
stem cell | 8.03e-10 | 441 |
mesodermal cell | 2.39e-09 | 121 |
vascular associated smooth muscle cell | 2.49e-09 | 32 |
preadipocyte | 1.16e-08 | 12 |
skin fibroblast | 3.28e-08 | 23 |
extraembryonic cell | 8.70e-08 | 19 |
stromal cell | 1.53e-07 | 28 |
extracellular matrix secreting cell | 8.17e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 7.29e-20 | 78 |
somite | 1.74e-19 | 71 |
presomitic mesoderm | 1.74e-19 | 71 |
presumptive segmental plate | 1.74e-19 | 71 |
dermomyotome | 1.74e-19 | 71 |
trunk paraxial mesoderm | 1.74e-19 | 71 |
dense mesenchyme tissue | 2.12e-19 | 73 |
paraxial mesoderm | 8.13e-19 | 72 |
presumptive paraxial mesoderm | 8.13e-19 | 72 |
skeletal muscle tissue | 1.13e-18 | 62 |
striated muscle tissue | 1.13e-18 | 62 |
myotome | 1.13e-18 | 62 |
muscle tissue | 1.67e-18 | 64 |
musculature | 1.67e-18 | 64 |
musculature of body | 1.67e-18 | 64 |
mesenchyme | 2.47e-16 | 160 |
entire embryonic mesenchyme | 2.47e-16 | 160 |
trunk mesenchyme | 9.73e-16 | 122 |
multilaminar epithelium | 1.04e-15 | 83 |
trunk | 1.95e-10 | 199 |
splanchnic layer of lateral plate mesoderm | 1.05e-08 | 83 |
unilaminar epithelium | 1.07e-08 | 148 |
surface structure | 1.41e-07 | 99 |
integument | 1.73e-07 | 46 |
integumental system | 1.73e-07 | 46 |
mesoderm | 3.07e-07 | 315 |
mesoderm-derived structure | 3.07e-07 | 315 |
presumptive mesoderm | 3.07e-07 | 315 |
adipose tissue | 3.30e-07 | 14 |