FFCP PHASE1:Hg19::chr17:46882324..46882346,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:46882324..46882346,-
|short_description=p@chr17:46882324..46882346,-
|description=CAGE_peak_at_chr17:46882324..46882346,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:46882324..46882346,- | |||
|coexpression_cluster_id=C90 | |||
|description=CAGE_peak_at_chr17:46882324..46882346,- | |||
|id=chr17:46882324..46882346,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002535;1.40e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,1.45e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006242;7.09e-14;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;1.85e-31;10!DOID:3095;2.53e-14;22!DOID:2994;2.53e-14;22!DOID:3193;9.86e-08;2!DOID:962;9.86e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.63e-31,10;DOID:3095,2.39e-14,22;DOID:2994,2.39e-14,22;DOID:3193,9.87e-08,2;DOID:962,9.87e-08,2;DOID:0050687,1.60e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.07e-26!57;UBERON:0005068!2.07e-26!57;UBERON:0006241!2.07e-26!57;UBERON:0007135!2.07e-26!57;UBERON:0002346!2.57e-22!90;UBERON:0002616!8.29e-22!59;UBERON:0001017!2.44e-21!82;UBERON:0000955!4.13e-21!69;UBERON:0006238!4.13e-21!69;UBERON:0007023!1.71e-20!115;UBERON:0002020!1.87e-20!34;UBERON:0003528!1.87e-20!34;UBERON:0005743!7.20e-20!86;UBERON:0000073!1.65e-19!94;UBERON:0001016!1.65e-19!94;UBERON:0001893!1.45e-18!34;UBERON:0001869!3.59e-18!32;UBERON:0003075!9.97e-18!86;UBERON:0007284!9.97e-18!86;UBERON:0002780!1.11e-17!41;UBERON:0001890!1.11e-17!41;UBERON:0006240!1.11e-17!41;UBERON:0001950!1.32e-17!20;UBERON:0002791!3.28e-17!33;UBERON:0003080!4.10e-17!42;UBERON:0002619!1.05e-15!22;UBERON:0000956!2.06e-13!25;UBERON:0000203!2.06e-13!25;UBERON:0001737!8.77e-13!9;UBERON:0000200!1.13e-11!6;UBERON:0000924!1.84e-11!173;UBERON:0006601!1.84e-11!173;UBERON:0003056!5.81e-11!61;UBERON:0003076!8.23e-11!15;UBERON:0003057!8.23e-11!15;UBERON:0000033!3.74e-10!123;UBERON:0000153!6.01e-10!129;UBERON:0007811!6.01e-10!129;UBERON:0004733!4.00e-09!12;UBERON:0002028!4.00e-09!12;UBERON:0007277!4.00e-09!12;UBERON:0004121!7.50e-09!169;UBERON:0002308!7.72e-09!9;UBERON:0000125!7.72e-09!9;UBERON:0004732!2.66e-08!13;UBERON:0002298!4.62e-08!8;UBERON:0000064!7.48e-08!219;UBERON:0001557!7.48e-08!19;UBERON:0000481!2.78e-07!347;UBERON:0002680!4.50e-07!9;UBERON:0001895!4.50e-07!9;UBERON:0010092!4.50e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;2.29e-50;4!UBERON:0000923;2.29e-50;4!UBERON:0010316;2.29e-50;4!UBERON:0005291;2.29e-50;4!UBERON:0002050;2.13e-40;5!UBERON:0005423;2.13e-40;5!UBERON:0003714;9.86e-08;2!UBERON:0006955;1.40e-07;2!UBERON:0004801;1.40e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,9.87e-08,2;UBERON:0006955,1.45e-07,2;UBERON:0004801,1.45e-07,2 | |||
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| ||
|short_description=p@chr17:46882324..46882346,- | |||
}} | }} |
Latest revision as of 18:14, 25 July 2015
Short description: | p@chr17:46882324..46882346, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:46882324..46882346, - |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.45e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
neural tissue | 9.87e-08 | 2 |
uterine epithelium | 1.45e-07 | 2 |
cervix epithelium | 1.45e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.63e-31 | 10 |
germ cell and embryonal cancer | 2.39e-14 | 22 |
germ cell cancer | 2.39e-14 | 22 |
peripheral nerve sheath neoplasm | 9.87e-08 | 2 |
neurofibroma | 9.87e-08 | 2 |
cell type cancer | 1.60e-07 | 143 |