FFCP PHASE1:Hg19::chr17:46679202..46679220,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-279bp_to_ENST00000491264_5end | |||
|cluster_id=chr17:46679202..46679220,+ | |||
|coexpression_cluster_id=C39 | |||
|description=CAGE_peak_2_at_ENST00000491264_5end | |||
|id=chr17:46679202..46679220,+ | |||
|ontology_enrichment_celltype=CL:1000507!4.19e-09!12;CL:1000494!4.19e-09!12;CL:0002681!2.22e-08!13;CL:0002584!2.22e-08!13;CL:1000497!2.43e-08!18;CL:0002518!2.43e-08!18;CL:0000066!2.91e-07!254;CL:0000650!4.88e-07!3;CL:1000618!4.88e-07!3;CL:1001318!4.88e-07!3;CL:0002173!4.88e-07!3;CL:1000500!4.88e-07!3;CL:0000239!6.76e-07!3;CL:1000615!6.76e-07!3;CL:0002306!6.76e-07!3;CL:1000449!9.46e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000083;1.57e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000083,1.44e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0007297;8.77e-67;2!UBERON:0005754;3.05e-34;1!UBERON:0009497;4.15e-11;13 | |||
|ontology_enrichment_disease=DOID:4929!5.26e-10!2;DOID:0050687!1.14e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:4074;1.07e-17;2!DOID:4905;1.07e-17;2!DOID:3498;1.07e-17;2!DOID:1793;1.57e-09;4!DOID:170;8.97e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,9.07e-18,2;DOID:4905,9.07e-18,2;DOID:3498,9.07e-18,2;DOID:1793,1.44e-09,4;DOID:170,8.48e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000058!6.24e-23!26;UBERON:0006947!3.22e-15!3;UBERON:0004054!3.22e-15!3;UBERON:0002113!7.66e-15!27;UBERON:0003918!7.66e-15!27;UBERON:0005095!7.66e-15!27;UBERON:0007687!7.66e-15!27;UBERON:0000489!8.27e-15!32;UBERON:0000080!1.59e-11!18;UBERON:0002120!1.59e-11!18;UBERON:0004875!1.59e-11!18;UBERON:0005721!1.59e-11!18;UBERON:0005754!1.59e-11!18;UBERON:0007297!1.59e-11!18;UBERON:0005904!1.59e-11!4;UBERON:0002394!6.20e-11!4;UBERON:0003928!6.20e-11!4;UBERON:0004876!2.84e-10!20;UBERON:0006554!3.67e-10!44;UBERON:0001008!6.91e-10!45;UBERON:0003887!9.77e-10!21;UBERON:0009773!4.19e-09!12;UBERON:0001231!4.19e-09!12;UBERON:0004810!4.19e-09!12;UBERON:0006555!5.07e-09!17;UBERON:0005103!5.07e-09!17;UBERON:0000083!5.07e-09!17;UBERON:0009201!5.07e-09!17;UBERON:0004819!5.07e-09!17;UBERON:0006553!5.07e-09!17;UBERON:0003074!5.07e-09!17;UBERON:0003060!5.07e-09!17;UBERON:0001225!2.22e-08!13;UBERON:0008987!2.22e-08!13;UBERON:0003886!7.68e-08!63;UBERON:0005172!9.10e-08!55;UBERON:0005173!9.10e-08!55;UBERON:0000466!1.76e-07!126;UBERON:0005177!3.71e-07!107;UBERON:0003567!4.88e-07!3;UBERON:0003838!4.88e-07!3;UBERON:0005169!4.88e-07!3;UBERON:0002321!4.88e-07!3;UBERON:0005215!4.88e-07!3;UBERON:0002303!4.88e-07!3;UBERON:0002319!4.88e-07!3;UBERON:0003135!4.97e-07!11;UBERON:0006853!6.76e-07!3;UBERON:0007685!6.76e-07!3;UBERON:0004134!6.76e-07!3;UBERON:0002553!8.07e-07!70;UBERON:0002417!8.51e-07!61;UBERON:0000916!8.51e-07!61;UBERON:0001851!9.46e-07!16;UBERON:0004211!9.46e-07!16;UBERON:0001285!9.46e-07!16;UBERON:0007684!9.46e-07!16;UBERON:0003220!9.46e-07!16;UBERON:0004208!9.46e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;4.06e-99;3!UBERON:0004054;4.06e-99;3!UBERON:0005904;1.21e-74;4!UBERON:0000058;4.61e-53;10!UBERON:0001301;1.84e-34;1!UBERON:0001000;3.05e-34;1!UBERON:0000998;3.05e-34;1!UBERON:0006868;3.05e-34;1!UBERON:0005352;3.05e-34;1!UBERON:0003135;8.12e-28;11!UBERON:0004175;5.40e-15;21!UBERON:0003101;2.38e-14;22!UBERON:0000079;2.38e-14;22!UBERON:0002394;1.57e-09;4!UBERON:0003928;1.57e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,4.06e-99,3;UBERON:0004054,4.06e-99,3;UBERON:0005904,1.21e-74,4;UBERON:0001301,1.84e-34,1;UBERON:0001000,2.58e-34,1;UBERON:0005352,2.58e-34,1;UBERON:0000998,3.61e-34,1;UBERON:0006868,3.61e-34,1;UBERON:0000058,2.49e-28,19;UBERON:0003135,8.12e-28,11;UBERON:0000080,9.04e-16,9;UBERON:0002120,9.04e-16,9;UBERON:0004875,9.04e-16,9;UBERON:0005721,9.04e-16,9;UBERON:0005754,9.04e-16,9;UBERON:0007297,9.04e-16,9;UBERON:0003101,2.38e-14,22;UBERON:0000079,2.38e-14,22;UBERON:0004876,4.25e-13,11;UBERON:0004175,1.01e-12,25;UBERON:0003887,4.30e-12,12;UBERON:0003133,5.76e-07,48;UBERON:0008835,6.09e-07,22;UBERON:0003894,6.09e-07,22;UBERON:0002394,8.97e-07,6;UBERON:0003928,8.97e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0.340187410553031,0,0,0.270946437543853,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852408440419239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52776196950456,0.179021174675609,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69946265673865,4.3404284313433,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,5.76598005198699,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0.343609788497747,0,0,0,0,0.407712618220842,0.627617077873999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0.157611414598396,0.577000469484979,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,4.23387050190929,0,0,0,0,0.294450700845729,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.227336094654718,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0.179650404213174,0,0.122241444182866,0,0,0,0 | |||
|short_description=p2@ENST00000491264 | |||
}} |
Latest revision as of 18:10, 25 July 2015
Short description: | p2@ENST00000491264 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000491264_5end |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | -279bp_to_ENST00000491264_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of pancreas | 1.44e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 4.06e-99 | 3 |
internal male genitalia | 4.06e-99 | 3 |
duct of male reproductive system | 1.21e-74 | 4 |
epididymis | 1.84e-34 | 1 |
vas deferens | 2.58e-34 | 1 |
spermatic cord | 2.58e-34 | 1 |
seminal vesicle | 3.61e-34 | 1 |
seminal fluid secreting gland | 3.61e-34 | 1 |
duct | 2.49e-28 | 19 |
male reproductive organ | 8.12e-28 | 11 |
mesonephros | 9.04e-16 | 9 |
pronephros | 9.04e-16 | 9 |
nephrogenic cord | 9.04e-16 | 9 |
pronephric mesoderm | 9.04e-16 | 9 |
rostral part of nephrogenic cord | 9.04e-16 | 9 |
presumptive pronephric mesoderm | 9.04e-16 | 9 |
male organism | 2.38e-14 | 22 |
male reproductive system | 2.38e-14 | 22 |
urogenital ridge | 4.25e-13 | 11 |
internal genitalia | 1.01e-12 | 25 |
intraembryonic coelom | 4.30e-12 | 12 |
reproductive organ | 5.76e-07 | 48 |
hepatic diverticulum | 6.09e-07 | 22 |
liver primordium | 6.09e-07 | 22 |
bile duct | 8.97e-07 | 6 |
digestive system duct | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 9.07e-18 | 2 |
pancreatic carcinoma | 9.07e-18 | 2 |
pancreatic ductal adenocarcinoma | 9.07e-18 | 2 |
pancreatic cancer | 1.44e-09 | 4 |
endocrine gland cancer | 8.48e-07 | 6 |