FFCP PHASE1:Hg19::chr17:46276775..46276789,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:46276775..46276789,- | |||
|description=CAGE_peak_at_chr17:46276775..46276789,- | |description=CAGE_peak_at_chr17:46276775..46276789,- | ||
|id=chr17:46276775..46276789,- | |id=chr17:46276775..46276789,- | ||
|ontology_enrichment_celltype=CL:0002618!3.24e-10!3;CL:0002543!1.90e-08!6 | |ontology_enrichment_celltype=CL:0002618!3.24e-10!3;CL:0002543!1.90e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000322;2.05e-07;3!CL:0002618;3.25e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,2.05e-07,3;CL:0002618,3.35e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.71e-19;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3119;2.58e-12;14!DOID:1325;1.77e-11;7!DOID:3904;1.77e-11;7!DOID:3910;1.72e-10;2!DOID:3905;3.92e-09;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,2.63e-12,14;DOID:1325,1.77e-11,7;DOID:3904,1.77e-11,7;DOID:3910,1.72e-10,2;DOID:3905,3.92e-09,9 | |||
|ontology_enrichment_uberon=UBERON:0006947!7.97e-10!3;UBERON:0004054!7.97e-10!3;UBERON:0002046!4.23e-09!5;UBERON:0004117!4.23e-09!5;UBERON:0007689!4.23e-09!5;UBERON:0007123!4.23e-09!5;UBERON:0003091!4.23e-09!5;UBERON:0009722!2.16e-08!11;UBERON:0007690!2.16e-08!11;UBERON:0001638!2.94e-08!9;UBERON:0003920!2.94e-08!9;UBERON:0004582!2.94e-08!9;UBERON:0001007!3.78e-08!155;UBERON:0001555!3.78e-08!155;UBERON:0007026!3.78e-08!155;UBERON:0004119!1.17e-07!169;UBERON:0000925!1.17e-07!169;UBERON:0006595!1.17e-07!169;UBERON:0004921!1.26e-07!129;UBERON:0004185!1.26e-07!129;UBERON:0005904!1.87e-07!4;UBERON:0007023!2.17e-07!115;UBERON:0005911!6.15e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;1.71e-19;1!UBERON:0001567;1.71e-19;1!UBERON:0001044;5.26e-13;6!UBERON:0003293;5.26e-13;6!UBERON:0003294;5.26e-13;6!UBERON:0010047;5.26e-13;6!UBERON:0003408;5.26e-13;6!UBERON:0000167;5.26e-13;6!UBERON:0001041;2.84e-12;14!UBERON:0004903;1.72e-10;2!UBERON:0002173;1.72e-10;2!UBERON:0002186;1.72e-10;2!UBERON:0001829;1.98e-10;2!UBERON:0004089;1.98e-10;2!UBERON:0004921;1.23e-07;33!UBERON:0004821;2.05e-07;3!UBERON:0007499;2.05e-07;3!UBERON:0003215;2.05e-07;3!UBERON:0010368;2.05e-07;3!UBERON:0009911;2.05e-07;3!UBERON:0002299;2.05e-07;3!UBERON:0006524;2.05e-07;3!UBERON:0008874;2.05e-07;3!UBERON:0002169;2.05e-07;3!UBERON:0004894;2.05e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,1.56e-19,1;UBERON:0001567,1.56e-19,1;UBERON:0008801,1.56e-19,1;UBERON:0001044,5.42e-13,6;UBERON:0003293,5.42e-13,6;UBERON:0003294,5.42e-13,6;UBERON:0010047,5.42e-13,6;UBERON:0000167,5.42e-13,6;UBERON:0004903,1.72e-10,2;UBERON:0002173,1.72e-10,2;UBERON:0002186,1.72e-10,2;UBERON:0001829,1.89e-10,2;UBERON:0004089,1.89e-10,2;UBERON:0003408,3.63e-08,10;UBERON:0004821,2.05e-07,3;UBERON:0003215,2.05e-07,3;UBERON:0010368,2.05e-07,3;UBERON:0009911,2.05e-07,3;UBERON:0002299,2.05e-07,3;UBERON:0006524,2.05e-07,3;UBERON:0008874,2.05e-07,3;UBERON:0002169,2.05e-07,3;UBERON:0004894,2.05e-07,3;UBERON:0001041,2.42e-07,87;UBERON:0004921,3.96e-07,118 | |||
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| ||
|short_description=p@chr17:46276775..46276789,- | |short_description=p@chr17:46276775..46276789,- | ||
}} | }} |
Latest revision as of 18:03, 25 July 2015
Short description: | p@chr17:46276775..46276789, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:46276775..46276789, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 2.05e-07 | 3 |
endothelial cell of umbilical vein | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
parotid gland | 1.56e-19 | 1 |
cheek | 1.56e-19 | 1 |
parotid gland primordium | 1.56e-19 | 1 |
saliva-secreting gland | 5.42e-13 | 6 |
gland of oral region | 5.42e-13 | 6 |
gland of foregut | 5.42e-13 | 6 |
oral gland | 5.42e-13 | 6 |
oral cavity | 5.42e-13 | 6 |
bronchoalveolar duct junction | 1.72e-10 | 2 |
alveolar duct | 1.72e-10 | 2 |
bronchiole | 1.72e-10 | 2 |
major salivary gland | 1.89e-10 | 2 |
midface | 1.89e-10 | 2 |
gland of gut | 3.63e-08 | 10 |
pulmonary alveolus epithelium | 2.05e-07 | 3 |
alveolus | 2.05e-07 | 3 |
pulmonary lobule | 2.05e-07 | 3 |
lobule | 2.05e-07 | 3 |
alveolus of lung | 2.05e-07 | 3 |
alveolar system | 2.05e-07 | 3 |
pulmonary acinus | 2.05e-07 | 3 |
alveolar sac | 2.05e-07 | 3 |
alveolar wall | 2.05e-07 | 3 |
foregut | 2.42e-07 | 87 |
subdivision of digestive tract | 3.96e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 2.63e-12 | 14 |
bronchus cancer | 1.77e-11 | 7 |
bronchogenic carcinoma | 1.77e-11 | 7 |
lung adenocarcinoma | 1.72e-10 | 2 |
lung carcinoma | 3.92e-09 | 9 |