FFCP PHASE1:Hg19::chr17:43307429..43307443,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:43307429..43307443,+ | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_at_chr17:43307429..43307443,+ | |||
|id=chr17:43307429..43307443,+ | |||
|ontology_enrichment_celltype=CL:0000453!2.32e-31!5;CL:0002009!4.25e-21!65;CL:0000738!5.22e-21!140;CL:0000763!3.01e-20!112;CL:0000049!3.01e-20!112;CL:0000988!3.21e-20!182;CL:0002057!3.54e-19!42;CL:0000557!4.55e-19!71;CL:0000860!9.53e-18!45;CL:0000766!1.33e-17!76;CL:0000990!2.24e-17!8;CL:0002032!3.97e-17!165;CL:0000837!3.97e-17!165;CL:0002194!2.33e-16!63;CL:0000576!2.33e-16!63;CL:0000040!2.33e-16!63;CL:0000559!2.33e-16!63;CL:0000037!3.05e-16!172;CL:0000566!3.05e-16!172;CL:0000839!1.80e-14!70;CL:0002031!2.72e-14!124;CL:0000451!3.47e-14!10;CL:0001014!4.54e-14!2;CL:0001016!4.54e-14!2;CL:0002087!1.25e-11!119;CL:0000080!1.23e-10!6 | |||
|ontology_enrichment_celltype_v019=CL:0001014;1.42e-36;2!CL:0001016;1.42e-36;2!CL:0000453;2.70e-15;5!CL:0000840;6.50e-13;5!CL:0000771;2.37e-10;2!CL:0000990;6.35e-09;8!CL:0000081;1.39e-07;11!CL:0000451;1.84e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.70e-36,2;CL:0001016,1.70e-36,2;CL:0000453,2.90e-15,5;CL:0000840,6.90e-13,5;CL:0001029,6.90e-13,5;CL:0000988,1.32e-11,177;CL:0000771,2.27e-10,2;CL:0000990,6.61e-09,8;CL:0000738,6.77e-08,136;CL:0000081,1.37e-07,11;CL:0000451,1.90e-07,10;CL:0002009,2.91e-07,61;CL:0002031,6.46e-07,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060060!5.22e-08!1;DOID:0060061!5.22e-08!1;DOID:8691!5.22e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:0060060;1.56e-19;1!DOID:0060061;1.56e-19;1!DOID:8691;1.56e-19;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.56e-19,1;DOID:0060061,1.56e-19,1;DOID:8691,1.56e-19,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.48e-18!102;UBERON:0003061!2.48e-18!102;UBERON:0001474!2.63e-17!86;UBERON:0002371!1.38e-16!80;UBERON:0002193!2.31e-16!112;UBERON:0004765!2.99e-14!101;UBERON:0001434!2.99e-14!101;UBERON:0002204!9.20e-11!167;UBERON:0002405!1.32e-10!115;UBERON:0001882!3.17e-07!1;UBERON:0005403!3.17e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;3.59e-17;10!UBERON:0000178;1.14e-11;15!UBERON:0000179;1.14e-11;15!UBERON:0000463;1.14e-11;15!UBERON:0000478;1.65e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,3.59e-17,10;UBERON:0000358,3.59e-17,10;UBERON:0000307,3.59e-17,10;UBERON:0000091,3.59e-17,10;UBERON:0000087,3.59e-17,10;UBERON:0007010,3.59e-17,10;UBERON:0007806,3.59e-17,10;UBERON:0008780,3.59e-17,10;UBERON:0005728,3.59e-17,10;UBERON:0000178,1.14e-11,15;UBERON:0000179,1.14e-11,15;UBERON:0000463,1.14e-11,15;UBERON:0002390,3.45e-11,98;UBERON:0003061,3.45e-11,98;UBERON:0002193,4.08e-10,108;UBERON:0000478,1.65e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0,0,0,0,0,0.645484683583826,0,0.376484679085209,0,0,0.306083892370903,0.641858054152187,0.639337125799041,0,0,0,0.290209238628584,0.56738522469114,1.86846674698672,0,0,0,0,1.10483290796269,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17002132569619,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0.193341436584244,0,0,0,0,0,0.0852266274161009,0.445160178233687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2678028898636,9.02016754309471,8.56259985944734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.78352179414492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1248694577575,2.32140586367385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.974301544196942,0.132864840313363,0.163565394255844,0,0,0,7.9994958341972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:43307429..43307443,+ | |||
}} |
Latest revision as of 17:44, 25 July 2015
Short description: | p@chr17:43307429..43307443, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:43307429..43307443, + |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.70e-36 | 2 |
immature CD1a-positive Langerhans cell | 1.70e-36 | 2 |
Langerhans cell | 2.90e-15 | 5 |
immature conventional dendritic cell | 6.90e-13 | 5 |
common dendritic progenitor | 6.90e-13 | 5 |
hematopoietic cell | 1.32e-11 | 177 |
eosinophil | 2.27e-10 | 2 |
conventional dendritic cell | 6.61e-09 | 8 |
leukocyte | 6.77e-08 | 136 |
blood cell | 1.37e-07 | 11 |
dendritic cell | 1.90e-07 | 10 |
macrophage dendritic cell progenitor | 2.91e-07 | 61 |
hematopoietic lineage restricted progenitor cell | 6.46e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 3.59e-17 | 10 |
blastocyst | 3.59e-17 | 10 |
blastula | 3.59e-17 | 10 |
bilaminar disc | 3.59e-17 | 10 |
inner cell mass | 3.59e-17 | 10 |
cleaving embryo | 3.59e-17 | 10 |
connecting stalk | 3.59e-17 | 10 |
inner cell mass derived epiblast | 3.59e-17 | 10 |
extraembryonic mesoderm | 3.59e-17 | 10 |
blood | 1.14e-11 | 15 |
haemolymphatic fluid | 1.14e-11 | 15 |
organism substance | 1.14e-11 | 15 |
hematopoietic system | 3.45e-11 | 98 |
blood island | 3.45e-11 | 98 |
hemolymphoid system | 4.08e-10 | 108 |
extraembryonic structure | 1.65e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.56e-19 | 1 |
cutaneous T cell lymphoma | 1.56e-19 | 1 |
mycosis fungoides | 1.56e-19 | 1 |