FFCP PHASE1:Hg19::chr17:43307326..43307342,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:43307326..43307342,+ | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_at_chr17:43307326..43307342,+ | |description=CAGE_peak_at_chr17:43307326..43307342,+ | ||
|id=chr17:43307326..43307342,+ | |id=chr17:43307326..43307342,+ | ||
|ontology_enrichment_celltype=CL:0000453!3.84e-39!5;CL:0000990!1.06e-30!8;CL:0000451!4.73e-25!10;CL:0001014!8.55e-17!2;CL:0001016!8.55e-17!2;CL:0000988!4.97e-15!182;CL:0000738!2.02e-14!140;CL:0000080!9.10e-13!6;CL:0000840!3.15e-12!5;CL:0001029!3.15e-12!5;CL:0002032!9.50e-12!165;CL:0000837!9.50e-12!165;CL:0000037!3.87e-11!172;CL:0000566!3.87e-11!172;CL:0000763!8.01e-11!112;CL:0000049!8.01e-11!112;CL:0002031!5.12e-08!124;CL:0000557!2.86e-07!71;CL:0000081!4.69e-07!11 | |ontology_enrichment_celltype=CL:0000453!3.84e-39!5;CL:0000990!1.06e-30!8;CL:0000451!4.73e-25!10;CL:0001014!8.55e-17!2;CL:0001016!8.55e-17!2;CL:0000988!4.97e-15!182;CL:0000738!2.02e-14!140;CL:0000080!9.10e-13!6;CL:0000840!3.15e-12!5;CL:0001029!3.15e-12!5;CL:0002032!9.50e-12!165;CL:0000837!9.50e-12!165;CL:0000037!3.87e-11!172;CL:0000566!3.87e-11!172;CL:0000763!8.01e-11!112;CL:0000049!8.01e-11!112;CL:0002031!5.12e-08!124;CL:0000557!2.86e-07!71;CL:0000081!4.69e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0001014;2.74e-15;2!CL:0001016;2.74e-15;2!CL:0000081;2.68e-11;11!CL:0000775;9.90e-11;3!CL:0000453;6.77e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,2.74e-15,2;CL:0001016,2.74e-15,2;CL:0000081,2.68e-11,11;CL:0000775,9.90e-11,3;CL:0000988,5.65e-08,177;CL:0000453,6.77e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060060!2.40e-09!1;DOID:0060061!2.40e-09!1;DOID:8691!2.40e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:0060060;3.16e-29;1!DOID:0060061;3.16e-29;1!DOID:8691;3.16e-29;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,3.16e-29,1;DOID:0060061,3.16e-29,1;DOID:8691,3.16e-29,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.00e-08!102;UBERON:0003061!1.00e-08!102;UBERON:0002336!1.16e-08!1;UBERON:0001018!1.16e-08!1;UBERON:0002473!1.16e-08!1;UBERON:0005340!1.16e-08!1;UBERON:0002316!1.16e-08!1;UBERON:0003544!1.16e-08!1;UBERON:0001020!1.16e-08!1;UBERON:0005970!1.16e-08!1;UBERON:0002437!1.16e-08!1;UBERON:0002331!7.57e-08!10;UBERON:0000358!7.57e-08!10;UBERON:0000307!7.57e-08!10;UBERON:0000091!7.57e-08!10;UBERON:0000087!7.57e-08!10;UBERON:0007806!7.57e-08!10;UBERON:0008780!7.57e-08!10;UBERON:0005728!7.57e-08!10;UBERON:0002193!9.08e-08!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;2.55e-26;10!UBERON:0000178;7.82e-18;15!UBERON:0000179;7.82e-18;15!UBERON:0000463;7.82e-18;15!UBERON:0000478;1.97e-11;24!UBERON:0002390;7.90e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.55e-26,10;UBERON:0000358,2.55e-26,10;UBERON:0000307,2.55e-26,10;UBERON:0000091,2.55e-26,10;UBERON:0000087,2.55e-26,10;UBERON:0007010,2.55e-26,10;UBERON:0007806,2.55e-26,10;UBERON:0008780,2.55e-26,10;UBERON:0005728,2.55e-26,10;UBERON:0000178,7.82e-18,15;UBERON:0000179,7.82e-18,15;UBERON:0000463,7.82e-18,15;UBERON:0000478,1.97e-11,24 | |||
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|short_description=p@chr17:43307326..43307342,+ | |short_description=p@chr17:43307326..43307342,+ | ||
}} | }} |
Latest revision as of 17:44, 25 July 2015
Short description: | p@chr17:43307326..43307342, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:43307326..43307342, + |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 2.74e-15 | 2 |
immature CD1a-positive Langerhans cell | 2.74e-15 | 2 |
blood cell | 2.68e-11 | 11 |
neutrophil | 9.90e-11 | 3 |
hematopoietic cell | 5.65e-08 | 177 |
Langerhans cell | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 2.55e-26 | 10 |
blastocyst | 2.55e-26 | 10 |
blastula | 2.55e-26 | 10 |
bilaminar disc | 2.55e-26 | 10 |
inner cell mass | 2.55e-26 | 10 |
cleaving embryo | 2.55e-26 | 10 |
connecting stalk | 2.55e-26 | 10 |
inner cell mass derived epiblast | 2.55e-26 | 10 |
extraembryonic mesoderm | 2.55e-26 | 10 |
blood | 7.82e-18 | 15 |
haemolymphatic fluid | 7.82e-18 | 15 |
organism substance | 7.82e-18 | 15 |
extraembryonic structure | 1.97e-11 | 24 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 3.16e-29 | 1 |
cutaneous T cell lymphoma | 3.16e-29 | 1 |
mycosis fungoides | 3.16e-29 | 1 |