FFCP PHASE1:Hg19::chr17:42993715..42993719,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:42993715..42993719,- | |||
|coexpression_cluster_id=C372 | |||
|description=CAGE_peak_at_chr17:42993715..42993719,- | |description=CAGE_peak_at_chr17:42993715..42993719,- | ||
|id=chr17:42993715..42993719,- | |id=chr17:42993715..42993719,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;4.27e-34;3!UBERON:0003057;4.27e-34;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003076!1.12e-49!15;UBERON:0003057!1.12e-49!15;UBERON:0002240!4.05e-47!3;UBERON:0001049!2.96e-43!57;UBERON:0005068!2.96e-43!57;UBERON:0006241!2.96e-43!57;UBERON:0007135!2.96e-43!57;UBERON:0002298!7.27e-31!8;UBERON:0001017!1.35e-29!82;UBERON:0005174!1.32e-28!5;UBERON:0001137!1.32e-28!5;UBERON:0003075!1.52e-28!86;UBERON:0007284!1.52e-28!86;UBERON:0005743!3.30e-28!86;UBERON:0002346!3.01e-27!90;UBERON:0000073!1.67e-25!94;UBERON:0001016!1.67e-25!94;UBERON:0002616!2.25e-24!59;UBERON:0001896!1.17e-21!3;UBERON:0005290!1.17e-21!3;UBERON:0010096!1.17e-21!3;UBERON:0000988!4.02e-21!3;UBERON:0004733!9.96e-21!12;UBERON:0002028!9.96e-21!12;UBERON:0007277!9.96e-21!12;UBERON:0000955!1.79e-20!69;UBERON:0006238!1.79e-20!69;UBERON:0004732!3.64e-19!13;UBERON:0007023!4.79e-18!115;UBERON:0002336!1.21e-16!1;UBERON:0001018!1.21e-16!1;UBERON:0002473!1.21e-16!1;UBERON:0005340!1.21e-16!1;UBERON:0002316!1.21e-16!1;UBERON:0003544!1.21e-16!1;UBERON:0001020!1.21e-16!1;UBERON:0005970!1.21e-16!1;UBERON:0002437!1.21e-16!1;UBERON:0001882!2.63e-16!1;UBERON:0005403!2.63e-16!1;UBERON:0000369!4.87e-16!4;UBERON:0002435!4.87e-16!4;UBERON:0000204!4.87e-16!4;UBERON:0010082!4.87e-16!4;UBERON:0002308!9.50e-16!9;UBERON:0000125!9.50e-16!9;UBERON:0004121!6.28e-14!169;UBERON:0000924!1.38e-13!173;UBERON:0006601!1.38e-13!173;UBERON:0000349!4.13e-13!5;UBERON:0002780!9.43e-13!41;UBERON:0001890!9.43e-13!41;UBERON:0006240!9.43e-13!41;UBERON:0003080!1.89e-12!42;UBERON:0000025!3.76e-12!194;UBERON:0000033!3.07e-11!123;UBERON:0002791!3.64e-11!33;UBERON:0001893!7.57e-11!34;UBERON:0002020!7.73e-11!34;UBERON:0003528!7.73e-11!34;UBERON:0000153!1.11e-10!129;UBERON:0007811!1.11e-10!129;UBERON:0009663!1.41e-09!7;UBERON:0004111!1.47e-09!241;UBERON:0001954!5.08e-09!2;UBERON:0003022!5.08e-09!2;UBERON:0002421!5.08e-09!2;UBERON:0002600!5.08e-09!2;UBERON:0005162!5.49e-09!2;UBERON:0000122!5.49e-09!2;UBERON:0002148!5.94e-09!2;UBERON:0009662!5.94e-09!2;UBERON:0001873!6.42e-09!2;UBERON:0010122!6.42e-09!2;UBERON:0001897!6.94e-09!2;UBERON:0003056!1.47e-08!61;UBERON:0000477!7.33e-08!286;UBERON:0002680!1.13e-07!9;UBERON:0001895!1.13e-07!9;UBERON:0010092!1.13e-07!9;UBERON:0002420!1.20e-07!9;UBERON:0007245!1.20e-07!9;UBERON:0010009!1.20e-07!9;UBERON:0010011!1.20e-07!9;UBERON:0000454!1.20e-07!9;UBERON:0001869!1.28e-07!32;UBERON:0000483!3.52e-07!309;UBERON:0000119!4.25e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;4.27e-34;3!UBERON:0005174;4.27e-34;3!UBERON:0001137;4.27e-34;3!UBERON:0001896;5.96e-34;3!UBERON:0005290;5.96e-34;3!UBERON:0002298;9.07e-18;6!UBERON:0004733;1.33e-09;12!UBERON:0002028;1.33e-09;12!UBERON:0004732;5.70e-09;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,4.27e-34,3;UBERON:0005174,4.27e-34,3;UBERON:0001137,4.27e-34,3;UBERON:0001896,5.96e-34,3;UBERON:0005290,5.96e-34,3;UBERON:0010096,5.96e-34,3;UBERON:0003076,1.82e-27,15;UBERON:0003057,1.82e-27,15;UBERON:0002298,9.07e-18,6;UBERON:0004733,1.33e-09,12;UBERON:0002028,1.33e-09,12;UBERON:0007277,1.33e-09,12;UBERON:0004732,5.70e-09,13;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56 | |||
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|short_description=p@chr17:42993715..42993719,- | |short_description=p@chr17:42993715..42993719,- | ||
}} | }} |
Latest revision as of 17:37, 25 July 2015
Short description: | p@chr17:42993715..42993719, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:42993715..42993719, - |
Coexpression cluster: | C372_spinal_medulla_substantia_locus_thalamus_corpus_globus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spinal cord | 4.27e-34 | 3 |
dorsal region element | 4.27e-34 | 3 |
dorsum | 4.27e-34 | 3 |
medulla oblongata | 5.96e-34 | 3 |
myelencephalon | 5.96e-34 | 3 |
future myelencephalon | 5.96e-34 | 3 |
posterior neural tube | 1.82e-27 | 15 |
chordal neural plate | 1.82e-27 | 15 |
brainstem | 9.07e-18 | 6 |
segmental subdivision of hindbrain | 1.33e-09 | 12 |
hindbrain | 1.33e-09 | 12 |
presumptive hindbrain | 1.33e-09 | 12 |
segmental subdivision of nervous system | 5.70e-09 | 13 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |