FFCP PHASE1:Hg19::chr17:40705501..40705530,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:40705501..40705530,+
|short_description=p@chr17:40705501..40705530,+
|description=CAGE_peak_at_chr17:40705501..40705530,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:40705501..40705530,+ | |||
|description=CAGE_peak_at_chr17:40705501..40705530,+ | |||
|id=chr17:40705501..40705530,+ | |||
|ontology_enrichment_celltype=CL:0002159!1.16e-08!13;CL:0002076!3.43e-08!43 | |||
|ontology_enrichment_celltype_v019=CL:0002159;5.29e-14;14!CL:0000240;6.69e-11;6!CL:0000311;6.69e-11;6!CL:0000079;6.69e-11;6!CL:0000237;6.69e-11;6!CL:0002202;6.85e-11;9!CL:0002632;6.85e-11;9!CL:0000362;1.65e-10;9!CL:0002368;1.35e-09;13!CL:0002076;1.42e-09;42!CL:0000307;2.67e-09;3!CL:0000312;7.72e-09;5!CL:0002251;1.75e-07;20!CL:0000317;8.41e-07;2!CL:1000448;8.41e-07;2!CL:0002308;8.41e-07;2!CL:0002140;8.41e-07;2!CL:0002327;9.76e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,4.23e-14,14;CL:0002076,6.27e-13,42;CL:0002202,5.88e-11,9;CL:0002632,5.88e-11,9;CL:0000240,1.24e-10,6;CL:0000311,1.24e-10,6;CL:0000079,1.24e-10,6;CL:0000237,1.24e-10,6;CL:0000036,1.24e-10,6;CL:0000357,1.24e-10,6;CL:0000114,1.24e-10,6;CL:0000362,2.20e-10,9;CL:0000066,6.91e-10,253;CL:0002368,1.26e-09,13;CL:0000223,1.68e-09,58;CL:0000068,2.36e-09,3;CL:0000069,2.36e-09,3;CL:0000307,2.36e-09,3;CL:0000377,2.36e-09,3;CL:0000312,1.17e-08,5;CL:0002251,1.57e-07,20;CL:0000317,7.68e-07,2;CL:1000448,7.68e-07,2;CL:0002308,7.68e-07,2;CL:0002140,7.68e-07,2;CL:0002327,9.45e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000357;6.69e-11;6!CL:0000114;6.69e-11;6!CL:0000377;2.67e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!3.04e-08!57;UBERON:0005631!2.83e-07!14;UBERON:0000158!2.83e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0005910;1.26e-10;6!UBERON:0000486;5.79e-10;12!UBERON:0000365;1.43e-08;5!UBERON:0000344;2.91e-07;20!UBERON:0003729;4.90e-07;13!UBERON:0003343;7.86e-07;4!UBERON:0004785;7.86e-07;4!UBERON:0002419;8.41e-07;2!UBERON:0007771;8.41e-07;2!UBERON:0003297;8.41e-07;2!UBERON:0001821;8.41e-07;2!UBERON:0003487;8.41e-07;2!UBERON:0001820;8.41e-07;2!UBERON:0001911;9.76e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005910,1.16e-10,6;UBERON:0000365,1.27e-08,5;UBERON:0000344,3.10e-07,20;UBERON:0003729,5.10e-07,13;UBERON:0003343,7.32e-07,4;UBERON:0004785,7.32e-07,4;UBERON:0002419,7.68e-07,2;UBERON:0007771,7.68e-07,2;UBERON:0003297,7.68e-07,2;UBERON:0001821,7.68e-07,2;UBERON:0003487,7.68e-07,2;UBERON:0001820,7.68e-07,2;UBERON:0005089,7.68e-07,2;UBERON:0005088,7.68e-07,2;UBERON:0001911,9.45e-07,4;UBERON:0005333,9.45e-07,4;UBERON:0008425,9.45e-07,4;UBERON:0005311,9.45e-07,4 | |||
|phase1_expression=1.09007027562334,0.428201047781966,0.845726424575827,1.0007329835313,2.68176656656373,0.872338524100369,0,0.631719873426831,0,0,0.697801167972428,0.218441372130172,0.527533956456907,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,5.12050061923025,5.17655614233503,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895037932904712,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0,1.82147644146271,2.96627554227544,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0.402829317109147,0,0.24406205754817,0,0,0.17859945656816,0,0.112611480483322,0,0,0.183201743930407,0,0,6.10531672999548,0.496971951695318,0.633152558322899,1.98613771219828,0.286836620748814,0,0.560677600142307,1.06748995729705,0.49333509683432,0,0.134710672069688,0.490385709340376,0,0,0,0,0.570471821544449,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0,0,0.718618141816238,0.168336113954066,0,0,0,0,0,0.453728732640084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,3.67195621010264,0.818238361772504,2.29443676311203,0,0,0,0.207322110030741,0.252320850875628,0.36497735907583,0,0.643240938192885,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0,2.85350742062426,5.62008766288098,1.10581869652794,1.11106134190236,0,1.03993478527958,0,0.115930404975077,0,0,0,0.380508304469197,0,0,0,0,0,0,1.34385702559088,0.992425680696705,1.16426079513703,2.61570544662566,3.06706143332169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517086863031111,3.57656445851882,0,0.797814349754612,1.04007436911366,0.257207374262142,0,0.266422179016099,0,0,0.823240336780769,0,0,0,0.602878754119172,0,0.399891964728228,0,0,0,0,0,0,2.02693829334611,0.61642896765115,0.537182889719687,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.909382714338778,1.66435439510497,1.20956117331872,0.992431231275107,0.153461973288062,0.280660094433074,0.768834895534206,0,0.64341568457443,1.48418066444991,0.308419387605311,0.177561725313127,0.410635780069046,0.519254429183621,0.232420756919918,0,4.81215528727884,0.276242966807689,0,0,0,0.902399225814824,0.231046011313244,0.784349769176855,0,0.316654886678627,0,0,0,0,0,0,0.764628819135115,0,0,0,0,0.256450125116389,0,0,0.515205058238611,0,0,4.59412430396938,2.60024098414608,0,0.096670718292122,0.154048617114644,0.15350367472613,0.137836572484531,0.214840489736547,0.145016693914229,0.0852266274161009,0.267096106940212,1.15699440752685,0.960950336825531,0.382838137483752,0.6069466851333,0.929691098594572,0,0,0,1.59691809095107,0,0,0.286249773483982,0,0,0,0.255897791311334,0,0,0,0,0,0,1.01091240786658,0,0.421258456238981,0,0,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0,1.12678241012897,0,0,0,0.354761064070598,0,0,0.379473173765715,0,2.88666338176536,4.69211592875051,2.17781969722645,1.03558180854457,6.02707521739722,0,1.7737206141467,1.1486170010348,0,0,0,0,0,0,0,0,0.320472213382419,1.92495971052672,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50565556505718,0,0,0,0,0.561421621224659,0,1.94176834799221,0,1.42068073403207,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,5.46208551770398,0,2.12748913591143,0.344743373241465,0,0,0,0,0,0,0.295547618953547,0,0,0.975966209950223,0.153900517007594,0,2.3056390438806,1.70539524378567,2.28159481036217,0.638002319463839,0.641183153813036,1.06606955203727,0,0,0,2.03036094555463,1.9606253431774,0.671286347903371,1.70778359451767,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0.802577647298789,0,0,0,2.18502341580683,0,0,0,0,0,0,1.99396161812156,2.31694369112849,0.941798755221676,0,0,0.554698692052555,0,2.25382514053069,0,0.17472666824203,0,0,0,0,0.484945082442097,1.235585773681,0.225980740780532,0.274083849293502,0,0,0,0,0,0,0,0.458146384663663,0,0,0.99402028452346,1.41416420770077,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0.275078873194468,0.415440338029185,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,1.27134268827375,0,0.864221491201268,0,0,0.082092520749339,1.02232813071253,0,0,0,0,0.13223260174269,0,0,0,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0.544017803369474,0.5013797880454,0,0,0.157054096250234,0,0,0,0,0,0.0620964029413835,0,0,0.151649117541648,0,0,0.936669811613763,1.01444720027578,0.149254802886874,0.233713309847224,0,0,0,0,0.228840068396924,0.151230923763239,0.310874401165561,0,0.318593534327405,0,0.155262956876259,1.65882483136342,0.265841714557995,0.521745061811734,0.150257608997218,0.380805212168795,0,0.363697318405119,0.214821114084977,0,0,1.20008329398946,0.343395705182793,1.01024846629776,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0.76872455576384,0,0,0,0,0,0,0,0,1.26787274015176,0.19998739585493,0,0.172214979660816,0,0,1.11903606175556,0.622077260032973,0.127894371303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| ||
|short_description=p@chr17:40705501..40705530,+ | |||
}} | }} |
Latest revision as of 17:03, 25 July 2015
Short description: | p@chr17:40705501..40705530, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:40705501..40705530, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 4.23e-14 | 14 |
endo-epithelial cell | 6.27e-13 | 42 |
epithelial cell of tracheobronchial tree | 5.88e-11 | 9 |
epithelial cell of lower respiratory tract | 5.88e-11 | 9 |
stratified squamous epithelial cell | 1.24e-10 | 6 |
keratin accumulating cell | 1.24e-10 | 6 |
stratified epithelial cell | 1.24e-10 | 6 |
keratinizing barrier epithelial cell | 1.24e-10 | 6 |
epithelial fate stem cell | 1.24e-10 | 6 |
stratified epithelial stem cell | 1.24e-10 | 6 |
surface ectodermal cell | 1.24e-10 | 6 |
epidermal cell | 2.20e-10 | 9 |
epithelial cell | 6.91e-10 | 253 |
respiratory epithelial cell | 1.26e-09 | 13 |
endodermal cell | 1.68e-09 | 58 |
duct epithelial cell | 2.36e-09 | 3 |
branched duct epithelial cell | 2.36e-09 | 3 |
tracheal epithelial cell | 2.36e-09 | 3 |
tracheoblast | 2.36e-09 | 3 |
keratinocyte | 1.17e-08 | 5 |
epithelial cell of alimentary canal | 1.57e-07 | 20 |
sebum secreting cell | 7.68e-07 | 2 |
epithelial cell of sweat gland | 7.68e-07 | 2 |
epithelial cell of skin gland | 7.68e-07 | 2 |
acinar cell of sebaceous gland | 7.68e-07 | 2 |
mammary gland epithelial cell | 9.45e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
transitional epithelium | 1.16e-10 | 6 |
urothelium | 1.27e-08 | 5 |
mucosa | 3.10e-07 | 20 |
mouth mucosa | 5.10e-07 | 13 |
mucosa of oral region | 7.32e-07 | 4 |
respiratory system mucosa | 7.32e-07 | 4 |
skin gland | 7.68e-07 | 2 |
epidermis gland | 7.68e-07 | 2 |
gland of integumental system | 7.68e-07 | 2 |
sebaceous gland | 7.68e-07 | 2 |
skin sebaceous gland | 7.68e-07 | 2 |
sweat gland | 7.68e-07 | 2 |
sweat gland placode | 7.68e-07 | 2 |
sebaceous gland placode | 7.68e-07 | 2 |
mammary gland | 9.45e-07 | 4 |
mammary bud | 9.45e-07 | 4 |
mammary ridge | 9.45e-07 | 4 |
mammary placode | 9.45e-07 | 4 |