FFCP PHASE1:Hg19::chr17:40556677..40556728,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:40556677..40556728,- | |||
|coexpression_cluster_id=C1434 | |coexpression_cluster_id=C1434 | ||
|description=CAGE_peak_at_chr17:40556677..40556728,- | |description=CAGE_peak_at_chr17:40556677..40556728,- | ||
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|ontology_enrichment_celltype=CL:0000055!5.35e-25!180;CL:0000222!1.06e-20!119;CL:0000220!1.23e-16!246;CL:0002321!3.23e-16!248;CL:0000057!4.06e-15!75;CL:0000183!1.95e-14!59;CL:0000680!7.84e-14!57;CL:0000056!7.84e-14!57;CL:0000355!7.84e-14!57;CL:0000187!3.50e-13!54;CL:0000192!1.52e-11!42;CL:0000514!1.52e-11!42;CL:0000393!2.25e-11!60;CL:0000211!2.25e-11!60;CL:0000359!9.16e-11!32;CL:0000213!1.64e-09!57;CL:0000215!1.64e-09!57;CL:0000144!2.42e-08!625;CL:0002371!5.39e-08!591;CL:0002334!7.41e-07!12 | |ontology_enrichment_celltype=CL:0000055!5.35e-25!180;CL:0000222!1.06e-20!119;CL:0000220!1.23e-16!246;CL:0002321!3.23e-16!248;CL:0000057!4.06e-15!75;CL:0000183!1.95e-14!59;CL:0000680!7.84e-14!57;CL:0000056!7.84e-14!57;CL:0000355!7.84e-14!57;CL:0000187!3.50e-13!54;CL:0000192!1.52e-11!42;CL:0000514!1.52e-11!42;CL:0000393!2.25e-11!60;CL:0000211!2.25e-11!60;CL:0000359!9.16e-11!32;CL:0000213!1.64e-09!57;CL:0000215!1.64e-09!57;CL:0000144!2.42e-08!625;CL:0002371!5.39e-08!591;CL:0002334!7.41e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.02e-10;32!CL:0002334;8.15e-08;12!CL:0000192;1.81e-07;43!CL:0000057;5.20e-07;73!CL:0002620;7.18e-07;23!CL:0000187;8.85e-07;55!CL:0000136;8.93e-07;13 | |ontology_enrichment_celltype_v019=CL:0000359;3.02e-10;32!CL:0002334;8.15e-08;12!CL:0000192;1.81e-07;43!CL:0000057;5.20e-07;73!CL:0002620;7.18e-07;23!CL:0000187;8.85e-07;55!CL:0000136;8.93e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.58e-18,121;CL:0000057,3.19e-17,76;CL:0000680,2.34e-12,58;CL:0000056,2.34e-12,58;CL:0000355,2.34e-12,58;CL:0000187,6.49e-12,55;CL:0000359,1.51e-10,32;CL:0002321,4.50e-10,250;CL:0000393,4.88e-10,61;CL:0000211,4.88e-10,61;CL:0000192,4.93e-10,43;CL:0000514,4.93e-10,43;CL:0000213,6.74e-09,58;CL:0000215,6.74e-09,58;CL:0002334,3.50e-08,12;CL:0000136,2.63e-07,15;CL:0002620,5.09e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;1.81e-07;43!CL:0000355;5.85e-07;58 | |ontology_enrichment_development_v019=CL:0000514;1.81e-07;43!CL:0000355;5.85e-07;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p@chr17:40556677..40556728,- | |short_description=p@chr17:40556677..40556728,- | ||
}} | }} |
Latest revision as of 17:01, 25 July 2015
Short description: | p@chr17:40556677..40556728, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:40556677..40556728, - |
Coexpression cluster: | C1434_Olfactory_leiomyoma_Adipocyte_Hair_tenocyte_Preadipocyte_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.58e-18 | 121 |
fibroblast | 3.19e-17 | 76 |
muscle precursor cell | 2.34e-12 | 58 |
myoblast | 2.34e-12 | 58 |
multi-potent skeletal muscle stem cell | 2.34e-12 | 58 |
muscle cell | 6.49e-12 | 55 |
vascular associated smooth muscle cell | 1.51e-10 | 32 |
embryonic cell | 4.50e-10 | 250 |
electrically responsive cell | 4.88e-10 | 61 |
electrically active cell | 4.88e-10 | 61 |
smooth muscle cell | 4.93e-10 | 43 |
smooth muscle myoblast | 4.93e-10 | 43 |
lining cell | 6.74e-09 | 58 |
barrier cell | 6.74e-09 | 58 |
preadipocyte | 3.50e-08 | 12 |
fat cell | 2.63e-07 | 15 |
skin fibroblast | 5.09e-07 | 23 |