FFCP PHASE1:Hg19::chr17:39742770..39742785,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:39742770..39742785,+ | |||
|coexpression_cluster_id=C207 | |||
|description=CAGE_peak_at_chr17:39742770..39742785,+ | |description=CAGE_peak_at_chr17:39742770..39742785,+ | ||
|id=chr17:39742770..39742785,+ | |id=chr17:39742770..39742785,+ | ||
|ontology_enrichment_celltype=CL:0002368!2.74e-25!13;CL:0002076!4.43e-25!43;CL:0000223!5.93e-17!59;CL:0002159!1.74e-16!13;CL:0002202!2.99e-14!9;CL:0002632!2.99e-14!9;CL:0002328!3.80e-12!3;CL:0000622!7.72e-12!5;CL:0002623!9.73e-12!3;CL:0000066!1.12e-11!254;CL:0000068!2.44e-11!3;CL:0000069!2.44e-11!3;CL:0000307!2.44e-11!3;CL:0000377!2.44e-11!3;CL:0002166!6.92e-11!3;CL:0000240!2.42e-10!6;CL:0000311!2.42e-10!6;CL:0000079!2.42e-10!6;CL:0000237!2.42e-10!6;CL:0000036!2.42e-10!6;CL:0000357!2.42e-10!6;CL:0000114!2.42e-10!6;CL:0000154!7.22e-10!6;CL:0002327!8.06e-09!4;CL:0002077!9.54e-09!33;CL:0000362!1.66e-07!8;CL:0002251!1.95e-07!21;CL:0000312!2.51e-07!5 | |ontology_enrichment_celltype=CL:0002368!2.74e-25!13;CL:0002076!4.43e-25!43;CL:0000223!5.93e-17!59;CL:0002159!1.74e-16!13;CL:0002202!2.99e-14!9;CL:0002632!2.99e-14!9;CL:0002328!3.80e-12!3;CL:0000622!7.72e-12!5;CL:0002623!9.73e-12!3;CL:0000066!1.12e-11!254;CL:0000068!2.44e-11!3;CL:0000069!2.44e-11!3;CL:0000307!2.44e-11!3;CL:0000377!2.44e-11!3;CL:0002166!6.92e-11!3;CL:0000240!2.42e-10!6;CL:0000311!2.42e-10!6;CL:0000079!2.42e-10!6;CL:0000237!2.42e-10!6;CL:0000036!2.42e-10!6;CL:0000357!2.42e-10!6;CL:0000114!2.42e-10!6;CL:0000154!7.22e-10!6;CL:0002327!8.06e-09!4;CL:0002077!9.54e-09!33;CL:0000362!1.66e-07!8;CL:0002251!1.95e-07!21;CL:0000312!2.51e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002328;2.09e-21;3!CL:0002202;5.86e-19;9!CL:0002632;5.86e-19;9!CL:0000240;1.42e-18;6!CL:0000311;1.42e-18;6!CL:0000079;1.42e-18;6!CL:0000237;1.42e-18;6!CL:0002368;2.52e-18;13!CL:0002076;2.07e-15;42!CL:0000312;7.38e-13;5!CL:0002623;3.04e-10;3!CL:0000307;4.90e-10;3!CL:0002231;7.85e-10;3!CL:0002336;1.90e-08;1!CL:0002261;1.90e-08;1!CL:0002170;1.90e-08;1!CL:0002159;4.98e-08;14!CL:0002327;8.14e-08;4!CL:0000362;2.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002328,1.82e-21,3;CL:0002076,5.53e-21,42;CL:0002202,6.43e-19,9;CL:0002632,6.43e-19,9;CL:0000240,1.24e-18,6;CL:0000311,1.24e-18,6;CL:0000079,1.24e-18,6;CL:0000237,1.24e-18,6;CL:0000036,1.24e-18,6;CL:0000357,1.24e-18,6;CL:0000114,1.24e-18,6;CL:0002368,3.03e-18,13;CL:0000223,1.42e-14,58;CL:0000312,6.54e-13,5;CL:0002623,3.04e-10,3;CL:0000068,6.00e-10,3;CL:0000069,6.00e-10,3;CL:0000307,6.00e-10,3;CL:0000377,6.00e-10,3;CL:0002231,8.97e-10,3;CL:0000066,1.23e-08,253;CL:0002336,1.91e-08,1;CL:0002261,1.91e-08,1;CL:0002170,1.91e-08,1;CL:0002159,4.71e-08,14;CL:0002327,7.11e-08,4;CL:0000362,2.22e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000357;1.42e-18;6!CL:0000114;1.42e-18;6!CL:0000377;4.90e-10;3!UBERON:0000358;5.40e-08;1!CL:0000223;5.72e-08;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3151;5.40e-08;1!DOID:3149;5.40e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,7.10e-08,1;DOID:3149,7.10e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001004!1.85e-14!72;UBERON:0004815!3.80e-12!3;UBERON:0002031!3.80e-12!3;UBERON:0000166!5.93e-12!21;UBERON:0007196!6.59e-12!14;UBERON:0001558!6.59e-12!14;UBERON:0000065!3.27e-11!53;UBERON:0003102!3.28e-11!95;UBERON:0001723!4.42e-11!3;UBERON:0001033!4.42e-11!3;UBERON:0010056!4.42e-11!3;UBERON:0000165!1.03e-10!28;UBERON:0000930!1.03e-10!28;UBERON:0004119!5.45e-10!169;UBERON:0000925!5.45e-10!169;UBERON:0006595!5.45e-10!169;UBERON:0000161!6.40e-10!35;UBERON:0002185!3.35e-09!4;UBERON:0001911!8.06e-09!4;UBERON:0005333!8.06e-09!4;UBERON:0008425!8.06e-09!4;UBERON:0005311!8.06e-09!4;UBERON:0000078!1.30e-08!18;UBERON:0003126!2.63e-08!7;UBERON:0001005!2.63e-08!7;UBERON:0001708!2.86e-08!4;UBERON:0001704!2.86e-08!4;UBERON:0000072!4.78e-07!46;UBERON:0003729!5.31e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;2.09e-21;3!UBERON:0002031;2.09e-21;3!UBERON:0007196;8.13e-16;15!UBERON:0001558;8.13e-16;15!UBERON:0002185;4.54e-13;5!UBERON:0001723;8.97e-10;3!UBERON:0001033;8.97e-10;3!UBERON:0000485;1.79e-09;7!UBERON:0003126;3.84e-09;7!UBERON:0001005;3.84e-09;7!UBERON:0000165;2.79e-08;28!UBERON:0001911;8.14e-08;4!UBERON:0005795;9.61e-08;1!UBERON:0007029;9.61e-08;1!UBERON:0000014;1.84e-07;4!UBERON:0001003;2.48e-07;15!UBERON:0007376;2.48e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.82e-21,3;UBERON:0002031,1.82e-21,3;UBERON:0007196,8.80e-16,15;UBERON:0001558,8.80e-16,15;UBERON:0002185,4.19e-13,5;UBERON:0001004,7.53e-11,74;UBERON:0003102,1.25e-10,99;UBERON:0001723,7.85e-10,3;UBERON:0001033,7.85e-10,3;UBERON:0010056,7.85e-10,3;UBERON:0003126,4.42e-09,7;UBERON:0001005,4.42e-09,7;UBERON:0004119,1.28e-08,160;UBERON:0000925,1.28e-08,160;UBERON:0006595,1.28e-08,160;UBERON:0000065,1.31e-08,54;UBERON:0000161,2.36e-08,36;UBERON:0005153,3.20e-08,37;UBERON:0005157,3.39e-08,47;UBERON:0000072,4.81e-08,47;UBERON:0000165,5.46e-08,29;UBERON:0000930,5.46e-08,29;UBERON:0001911,7.11e-08,4;UBERON:0005333,7.11e-08,4;UBERON:0008425,7.11e-08,4;UBERON:0005311,7.11e-08,4;UBERON:0007029,8.12e-08,1;UBERON:0000166,1.47e-07,22;UBERON:0000485,1.75e-07,9;UBERON:0000014,1.94e-07,4;UBERON:0001003,2.26e-07,15;UBERON:0007376,2.26e-07,15;UBERON:0007383,2.26e-07,15 | |||
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| ||
|short_description=p@chr17:39742770..39742785,+ | |short_description=p@chr17:39742770..39742785,+ | ||
}} | }} |
Latest revision as of 16:44, 25 July 2015
Short description: | p@chr17:39742770..39742785, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:39742770..39742785, + |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial epithelial cell | 1.82e-21 | 3 |
endo-epithelial cell | 5.53e-21 | 42 |
epithelial cell of tracheobronchial tree | 6.43e-19 | 9 |
epithelial cell of lower respiratory tract | 6.43e-19 | 9 |
stratified squamous epithelial cell | 1.24e-18 | 6 |
keratin accumulating cell | 1.24e-18 | 6 |
stratified epithelial cell | 1.24e-18 | 6 |
keratinizing barrier epithelial cell | 1.24e-18 | 6 |
epithelial fate stem cell | 1.24e-18 | 6 |
stratified epithelial stem cell | 1.24e-18 | 6 |
surface ectodermal cell | 1.24e-18 | 6 |
respiratory epithelial cell | 3.03e-18 | 13 |
endodermal cell | 1.42e-14 | 58 |
keratinocyte | 6.54e-13 | 5 |
acinar cell of salivary gland | 3.04e-10 | 3 |
duct epithelial cell | 6.00e-10 | 3 |
branched duct epithelial cell | 6.00e-10 | 3 |
tracheal epithelial cell | 6.00e-10 | 3 |
tracheoblast | 6.00e-10 | 3 |
epithelial cell of prostate | 8.97e-10 | 3 |
epithelial cell | 1.23e-08 | 253 |
buccal mucosa cell | 1.91e-08 | 1 |
endothelial cell of viscerocranial mucosa | 1.91e-08 | 1 |
keratinized cell of the oral mucosa | 1.91e-08 | 1 |
general ecto-epithelial cell | 4.71e-08 | 14 |
mammary gland epithelial cell | 7.11e-08 | 4 |
epidermal cell | 2.22e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.82e-21 | 3 |
epithelium of bronchus | 1.82e-21 | 3 |
tracheobronchial tree | 8.80e-16 | 15 |
lower respiratory tract | 8.80e-16 | 15 |
bronchus | 4.19e-13 | 5 |
respiratory system | 7.53e-11 | 74 |
surface structure | 1.25e-10 | 99 |
tongue | 7.85e-10 | 3 |
gustatory system | 7.85e-10 | 3 |
future tongue | 7.85e-10 | 3 |
trachea | 4.42e-09 | 7 |
respiratory airway | 4.42e-09 | 7 |
endoderm-derived structure | 1.28e-08 | 160 |
endoderm | 1.28e-08 | 160 |
presumptive endoderm | 1.28e-08 | 160 |
respiratory tract | 1.31e-08 | 54 |
orifice | 2.36e-08 | 36 |
epithelial bud | 3.20e-08 | 37 |
epithelial fold | 3.39e-08 | 47 |
segment of respiratory tract | 4.81e-08 | 47 |
mouth | 5.46e-08 | 29 |
stomodeum | 5.46e-08 | 29 |
mammary gland | 7.11e-08 | 4 |
mammary bud | 7.11e-08 | 4 |
mammary ridge | 7.11e-08 | 4 |
mammary placode | 7.11e-08 | 4 |
surface | 8.12e-08 | 1 |
oral opening | 1.47e-07 | 22 |
simple columnar epithelium | 1.75e-07 | 9 |
zone of skin | 1.94e-07 | 4 |
skin epidermis | 2.26e-07 | 15 |
outer epithelium | 2.26e-07 | 15 |
enveloping layer of ectoderm | 2.26e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 7.10e-08 | 1 |
keratoacanthoma | 7.10e-08 | 1 |