FFCP PHASE1:Hg19::chr17:39740611..39740628,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:39740611..39740628,+ | |||
|coexpression_cluster_id=C207 | |||
|description=CAGE_peak_at_chr17:39740611..39740628,+ | |description=CAGE_peak_at_chr17:39740611..39740628,+ | ||
|id=chr17:39740611..39740628,+ | |id=chr17:39740611..39740628,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.45e-33!43;CL:0002368!5.56e-25!13;CL:0000223!6.63e-23!59;CL:0002159!1.39e-21!13;CL:0000066!1.28e-16!254;CL:0002251!6.60e-15!21;CL:0002202!3.77e-14!9;CL:0002632!3.77e-14!9;CL:0000622!8.17e-12!5;CL:0000068!1.12e-11!3;CL:0000069!1.12e-11!3;CL:0000307!1.12e-11!3;CL:0000377!1.12e-11!3;CL:0002328!1.21e-11!3;CL:0002621!1.66e-11!3;CL:0002166!2.44e-11!3;CL:0002623!2.71e-11!3;CL:0002077!4.81e-11!33;CL:0000240!3.13e-10!6;CL:0000311!3.13e-10!6;CL:0000079!3.13e-10!6;CL:0000237!3.13e-10!6;CL:0000036!3.13e-10!6;CL:0000357!3.13e-10!6;CL:0000114!3.13e-10!6;CL:0000154!7.56e-10!6;CL:0002327!5.42e-09!4;CL:0000575!1.44e-08!2;CL:0000362!9.25e-08!8;CL:0000312!2.17e-07!5;CL:0000220!2.18e-07!246;CL:0002321!2.86e-07!248 | |ontology_enrichment_celltype=CL:0002076!1.45e-33!43;CL:0002368!5.56e-25!13;CL:0000223!6.63e-23!59;CL:0002159!1.39e-21!13;CL:0000066!1.28e-16!254;CL:0002251!6.60e-15!21;CL:0002202!3.77e-14!9;CL:0002632!3.77e-14!9;CL:0000622!8.17e-12!5;CL:0000068!1.12e-11!3;CL:0000069!1.12e-11!3;CL:0000307!1.12e-11!3;CL:0000377!1.12e-11!3;CL:0002328!1.21e-11!3;CL:0002621!1.66e-11!3;CL:0002166!2.44e-11!3;CL:0002623!2.71e-11!3;CL:0002077!4.81e-11!33;CL:0000240!3.13e-10!6;CL:0000311!3.13e-10!6;CL:0000079!3.13e-10!6;CL:0000237!3.13e-10!6;CL:0000036!3.13e-10!6;CL:0000357!3.13e-10!6;CL:0000114!3.13e-10!6;CL:0000154!7.56e-10!6;CL:0002327!5.42e-09!4;CL:0000575!1.44e-08!2;CL:0000362!9.25e-08!8;CL:0000312!2.17e-07!5;CL:0000220!2.18e-07!246;CL:0002321!2.86e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0002159;7.08e-31;14!CL:0000622;9.61e-22;5!CL:0002251;1.76e-20;20!CL:0002623;2.28e-20;3!CL:0000240;6.40e-19;6!CL:0000311;6.40e-19;6!CL:0000079;6.40e-19;6!CL:0000237;6.40e-19;6!CL:0000154;3.64e-18;6!CL:0002327;2.78e-16;4!CL:0002076;1.62e-15;42!CL:0000575;3.03e-15;2!CL:0000312;2.17e-13;5!CL:0002202;5.62e-13;9!CL:0002632;5.62e-13;9!CL:0000362;7.29e-13;9!CL:0000150;3.49e-12;9!CL:0002077;4.56e-11;34!CL:0002328;1.19e-10;3!CL:0000307;1.91e-10;3!CL:0002621;2.65e-10;3!CL:0002166;6.22e-10;3!CL:0002368;5.08e-09;13!CL:0002252;3.33e-08;1!CL:0002336;4.56e-08;1!CL:0002261;4.56e-08;1!CL:0002170;4.56e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,7.09e-31,14;CL:0000622,7.94e-22,5;CL:0002076,2.40e-21,42;CL:0002251,1.65e-20,20;CL:0002623,1.86e-20,3;CL:0000240,5.45e-19,6;CL:0000311,5.45e-19,6;CL:0000079,5.45e-19,6;CL:0000237,5.45e-19,6;CL:0000036,5.45e-19,6;CL:0000357,5.45e-19,6;CL:0000114,5.45e-19,6;CL:0000154,3.11e-18,6;CL:0002327,2.51e-16,4;CL:0000575,3.61e-15,2;CL:0000223,7.44e-15,58;CL:0000312,1.99e-13,5;CL:0002202,5.98e-13,9;CL:0002632,5.98e-13,9;CL:0000362,6.76e-13,9;CL:0000066,1.23e-12,253;CL:0000150,3.15e-12,9;CL:0002077,4.57e-12,34;CL:0002328,1.22e-10,3;CL:0000068,2.05e-10,3;CL:0000069,2.05e-10,3;CL:0000307,2.05e-10,3;CL:0000377,2.05e-10,3;CL:0002621,2.47e-10,3;CL:0002166,6.22e-10,3;CL:0002368,5.30e-09,13;CL:0002252,3.83e-08,1;CL:0002336,4.11e-08,1;CL:0002261,4.11e-08,1;CL:0002170,4.11e-08,1;CL:0000076,1.57e-07,63;CL:0002321,4.10e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000357;6.40e-19;6!CL:0000114;6.40e-19;6!CL:0000377;1.91e-10;3!CL:0000223;1.20e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000165!5.98e-18!28;UBERON:0000930!5.98e-18!28;UBERON:0000166!9.63e-18!21;UBERON:0001004!1.33e-17!72;UBERON:0001444!8.17e-13!48;UBERON:0004119!1.00e-12!169;UBERON:0000925!1.00e-12!169;UBERON:0006595!1.00e-12!169;UBERON:0004815!1.21e-11!3;UBERON:0002031!1.21e-11!3;UBERON:0000161!1.32e-11!35;UBERON:0001949!1.66e-11!3;UBERON:0003102!4.73e-11!95;UBERON:0000065!6.32e-11!53;UBERON:0001723!8.79e-11!3;UBERON:0001033!8.79e-11!3;UBERON:0010056!8.79e-11!3;UBERON:0000078!9.11e-11!18;UBERON:0001911!5.42e-09!4;UBERON:0005333!5.42e-09!4;UBERON:0008425!5.42e-09!4;UBERON:0005311!5.42e-09!4;UBERON:0007196!7.82e-09!14;UBERON:0001558!7.82e-09!14;UBERON:0002185!7.85e-09!4;UBERON:0005631!1.19e-08!14;UBERON:0000158!1.19e-08!14;UBERON:0001708!1.32e-08!4;UBERON:0001704!1.32e-08!4;UBERON:0003124!3.38e-08!7;UBERON:0001042!5.65e-08!10;UBERON:0009145!5.65e-08!10;UBERON:0006562!3.18e-07!11;UBERON:0000072!7.28e-07!46;UBERON:0001007!7.41e-07!155;UBERON:0001555!7.41e-07!155;UBERON:0007026!7.41e-07!155;UBERON:0003729!9.38e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;2.78e-16;4!UBERON:0000165;2.74e-14;28!UBERON:0000161;2.61e-12;19!UBERON:0000166;2.61e-12;19!UBERON:0004815;1.19e-10;3!UBERON:0002031;1.19e-10;3!UBERON:0001044;1.78e-10;6!UBERON:0003293;1.78e-10;6!UBERON:0003294;1.78e-10;6!UBERON:0010047;1.78e-10;6!UBERON:0003408;1.78e-10;6!UBERON:0000167;1.78e-10;6!UBERON:0001949;2.65e-10;3!UBERON:0002365;8.19e-10;31!UBERON:0002330;8.19e-10;31!UBERON:0007811;7.81e-09;52!UBERON:0003729;1.22e-08;13!UBERON:0000964;4.65e-08;4!UBERON:0010409;4.65e-08;4!UBERON:0000997;6.24e-08;1!UBERON:0005056;6.24e-08;1!UBERON:0004176;6.24e-08;1!UBERON:0007196;7.90e-08;15!UBERON:0001558;7.90e-08;15!UBERON:0001041;8.26e-08;14!UBERON:0001003;9.19e-08;15!UBERON:0007376;9.19e-08;15!UBERON:0001708;1.16e-07;4!UBERON:0008895;1.16e-07;4!UBERON:0010371;1.60e-07;31!UBERON:0000033;2.12e-07;50!UBERON:0001444;4.17e-07;48!UBERON:0000153;5.28e-07;54!UBERON:0005631;7.88e-07;10!UBERON:0000158;7.88e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,2.51e-16,4;UBERON:0005333,2.51e-16,4;UBERON:0008425,2.51e-16,4;UBERON:0005311,2.51e-16,4;UBERON:0000033,3.11e-15,56;UBERON:0003102,1.32e-14,99;UBERON:0000166,3.07e-14,22;UBERON:0000165,8.63e-14,29;UBERON:0000930,8.63e-14,29;UBERON:0000153,1.50e-13,62;UBERON:0007811,1.50e-13,62;UBERON:0001444,3.29e-12,49;UBERON:0004815,1.22e-10,3;UBERON:0002031,1.22e-10,3;UBERON:0004121,1.24e-10,171;UBERON:0000924,1.24e-10,171;UBERON:0006601,1.24e-10,171;UBERON:0001044,1.61e-10,6;UBERON:0003293,1.61e-10,6;UBERON:0003294,1.61e-10,6;UBERON:0010047,1.61e-10,6;UBERON:0000167,1.61e-10,6;UBERON:0001949,2.47e-10,3;UBERON:0002365,5.09e-10,31;UBERON:0002330,5.09e-10,31;UBERON:0001004,2.63e-09,74;UBERON:0003729,1.18e-08,13;UBERON:0000076,2.04e-08,8;UBERON:0000161,2.15e-08,36;UBERON:0005631,2.89e-08,14;UBERON:0000158,2.89e-08,14;UBERON:0000964,5.08e-08,4;UBERON:0010409,5.08e-08,4;UBERON:0004348,5.08e-08,4;UBERON:0005427,5.08e-08,4;UBERON:0000997,6.68e-08,1;UBERON:0005056,6.68e-08,1;UBERON:0007196,8.19e-08,15;UBERON:0001558,8.19e-08,15;UBERON:0001003,8.79e-08,15;UBERON:0007376,8.79e-08,15;UBERON:0007383,8.79e-08,15;UBERON:0005085,1.14e-07,31;UBERON:0001708,1.16e-07,4;UBERON:0008895,1.16e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.51652734687356,18.3735610454733,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.00724817121796,7.04490441290416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05265836499774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.69673839234836,0.545492241181669,2.29443676311203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.45077197646417,4.49607013030478,4.72486170334665,2.31471112896324,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74935335947108,1.17587489739202,0.992425680696705,3.49278238541108,4.35950907770943,4.60059214998253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.156378572313,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.85054221432869,0,0,0,0,0,0,0,0,0,0.330569830721956,0.384380134730212,0.510450849978337,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962221127255121,6.70302275535787,4.3556393944529,0,0.86101074534246,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.59480145055684,0,3.07160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0,0,0,3.19001159731919,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,1.37189356380129,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.839277046316667,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01771458373847,0.231051332300676,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45051314914126,1.87790324803345,1.38251932362818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,2.17716747896961,0.684466602170562,0.0673520530145875,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.51652734687356,18.3735610454733,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.00724817121796,7.04490441290416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05265836499774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.69673839234836,0.545492241181669,2.29443676311203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.45077197646417,4.49607013030478,4.72486170334665,2.31471112896324,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74935335947108,1.17587489739202,0.992425680696705,3.49278238541108,4.35950907770943,4.60059214998253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.156378572313,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.85054221432869,0,0,0,0,0,0,0,0,0,0.330569830721956,0.384380134730212,0.510450849978337,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962221127255121,6.70302275535787,4.3556393944529,0,0.86101074534246,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.59480145055684,0,3.07160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0,0,0,3.19001159731919,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,1.37189356380129,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.839277046316667,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01771458373847,0.231051332300676,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45051314914126,1.87790324803345,1.38251932362818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,2.17716747896961,0.684466602170562,0.0673520530145875,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr17:39740611..39740628,+ | |short_description=p@chr17:39740611..39740628,+ | ||
}} | }} |
Latest revision as of 16:44, 25 July 2015
Short description: | p@chr17:39740611..39740628, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:39740611..39740628, + |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data