FFCP PHASE1:Hg19::chr17:39738633..39738657,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:39738633..39738657,-
|short_description=p@chr17:39738633..39738657,-
|description=CAGE_peak_at_chr17:39738633..39738657,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:39738633..39738657,- | |||
|coexpression_cluster_id=C3417 | |||
|description=CAGE_peak_at_chr17:39738633..39738657,- | |||
|id=chr17:39738633..39738657,- | |||
|ontology_enrichment_celltype=CL:0002076!1.62e-29!43;CL:0000622!1.12e-20!5;CL:0000223!3.14e-20!59;CL:0002159!3.03e-19!13;CL:0002251!6.81e-18!21;CL:0000154!3.46e-17!6;CL:0000244!3.80e-16!4;CL:0000731!3.80e-16!4;CL:0000066!2.08e-15!254;CL:0002368!3.49e-14!13;CL:0002623!1.11e-13!3;CL:0002328!2.54e-13!3;CL:0002621!4.50e-13!3;CL:0000150!2.35e-11!9;CL:0002327!7.32e-10!4;CL:0000575!1.20e-09!2;CL:0000317!9.57e-09!2;CL:1000448!9.57e-09!2;CL:0002308!9.57e-09!2;CL:0002140!9.57e-09!2;CL:0002077!1.84e-08!33;CL:0000362!2.06e-08!8;CL:0002202!1.54e-07!9;CL:0002632!1.54e-07!9;CL:0000240!5.84e-07!6;CL:0000311!5.84e-07!6;CL:0000079!5.84e-07!6;CL:0000237!5.84e-07!6;CL:0000036!5.84e-07!6;CL:0000357!5.84e-07!6;CL:0000114!5.84e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002623;2.08e-24;3!CL:0002251;1.13e-23;20!CL:0002076;3.92e-22;42!CL:0002159;1.44e-19;14!CL:0002327;1.40e-17;4!CL:0000575;1.08e-16;2!CL:0000622;6.90e-15;5!CL:0000154;1.70e-12;6!CL:0000240;2.31e-12;6!CL:0000311;2.31e-12;6!CL:0000079;2.31e-12;6!CL:0000237;2.31e-12;6!CL:0002328;1.24e-11;3!CL:0002166;4.89e-11;3!CL:0002621;4.89e-11;3!CL:0002252;2.13e-09;1!CL:0002336;6.72e-09;1!CL:0002261;6.72e-09;1!CL:0002170;6.72e-09;1!CL:0000244;1.70e-08;4!CL:0000731;1.70e-08;4!CL:0000150;1.71e-08;9!CL:0000312;2.54e-07;5!CL:0002077;7.60e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,2.09e-24,3;CL:0002076,2.54e-24,42;CL:0002251,9.85e-24,20;CL:0002159,1.54e-19,14;CL:0002327,1.66e-17,4;CL:0000223,4.90e-17,58;CL:0000575,8.55e-17,2;CL:0000622,6.91e-15,5;CL:0000154,1.70e-12,6;CL:0000240,2.31e-12,6;CL:0000311,2.31e-12,6;CL:0000079,2.31e-12,6;CL:0000237,2.31e-12,6;CL:0000036,2.31e-12,6;CL:0000357,2.31e-12,6;CL:0000114,2.31e-12,6;CL:0000066,3.25e-12,253;CL:0002328,1.21e-11,3;CL:0002621,3.09e-11,3;CL:0002166,6.32e-11,3;CL:0002252,2.04e-09,1;CL:0002336,6.72e-09,1;CL:0002261,6.72e-09,1;CL:0002170,6.72e-09,1;CL:0000244,1.30e-08,4;CL:0000731,1.30e-08,4;CL:0000150,1.71e-08,9;CL:0002077,9.26e-08,34;CL:0000312,2.54e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000357;2.31e-12;6!CL:0000114;2.31e-12;6!UBERON:0004874;6.72e-09;1!CL:0000223;2.92e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000165!2.30e-18!28;UBERON:0000930!2.30e-18!28;UBERON:0000166!1.30e-17!21;UBERON:0004119!4.39e-15!169;UBERON:0000925!4.39e-15!169;UBERON:0006595!4.39e-15!169;UBERON:0000161!3.59e-14!35;UBERON:0001004!9.53e-14!72;UBERON:0003102!1.04e-13!95;UBERON:0001444!1.57e-13!48;UBERON:0004815!2.54e-13!3;UBERON:0002031!2.54e-13!3;UBERON:0001949!4.50e-13!3;UBERON:0000365!6.10e-13!5;UBERON:0005910!8.46e-11!6;UBERON:0000078!4.03e-10!18;UBERON:0002185!4.24e-10!4;UBERON:0001911!7.32e-10!4;UBERON:0005333!7.32e-10!4;UBERON:0008425!7.32e-10!4;UBERON:0005311!7.32e-10!4;UBERON:0002419!9.57e-09!2;UBERON:0007771!9.57e-09!2;UBERON:0003297!9.57e-09!2;UBERON:0001821!9.57e-09!2;UBERON:0003487!9.57e-09!2;UBERON:0001820!9.57e-09!2;UBERON:0005089!9.57e-09!2;UBERON:0005088!9.57e-09!2;UBERON:0001007!4.57e-08!155;UBERON:0001555!4.57e-08!155;UBERON:0007026!4.57e-08!155;UBERON:0004121!7.25e-08!169;UBERON:0003729!1.05e-07!5;UBERON:0000924!1.45e-07!173;UBERON:0006601!1.45e-07!173;UBERON:0005911!1.74e-07!82;UBERON:0005157!1.87e-07!51;UBERON:0005153!2.91e-07!37;UBERON:0002530!2.93e-07!59;UBERON:0002365!3.06e-07!31;UBERON:0002330!3.06e-07!31;UBERON:0001044!4.98e-07!6;UBERON:0003293!4.98e-07!6;UBERON:0003294!4.98e-07!6;UBERON:0010047!4.98e-07!6;UBERON:0000167!4.98e-07!6;UBERON:0001003!5.14e-07!14;UBERON:0007376!5.14e-07!14;UBERON:0007383!5.14e-07!14;UBERON:0000065!9.23e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;1.40e-17;4!UBERON:0000165;1.35e-16;28!UBERON:0000161;3.37e-14;19!UBERON:0000166;3.37e-14;19!UBERON:0001044;1.70e-12;6!UBERON:0003293;1.70e-12;6!UBERON:0003294;1.70e-12;6!UBERON:0010047;1.70e-12;6!UBERON:0003408;1.70e-12;6!UBERON:0000167;1.70e-12;6!UBERON:0004815;1.24e-11;3!UBERON:0002031;1.24e-11;3!UBERON:0001949;4.89e-11;3!UBERON:0000486;2.77e-10;12!UBERON:0007811;5.35e-10;52!UBERON:0003729;1.67e-09;13!UBERON:0001041;2.71e-09;14!UBERON:0000033;4.89e-09;50!UBERON:0000989;6.72e-09;1!UBERON:0008811;6.72e-09;1!UBERON:0000964;8.50e-09;4!UBERON:0010409;8.50e-09;4!UBERON:0001708;1.70e-08;4!UBERON:0008895;1.70e-08;4!UBERON:0002365;2.59e-08;31!UBERON:0002330;2.59e-08;31!UBERON:0001444;3.74e-08;48!UBERON:0002185;2.58e-07;5!UBERON:0000153;2.59e-07;54!UBERON:0011159;5.81e-07;5!UBERON:0000365;5.81e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000033,1.08e-17,56;UBERON:0001911,1.66e-17,4;UBERON:0005333,1.66e-17,4;UBERON:0008425,1.66e-17,4;UBERON:0005311,1.66e-17,4;UBERON:0000166,1.50e-16,22;UBERON:0000165,5.10e-16,29;UBERON:0000930,5.10e-16,29;UBERON:0000153,8.90e-16,62;UBERON:0007811,8.90e-16,62;UBERON:0003102,9.34e-15,99;UBERON:0001444,3.21e-14,49;UBERON:0000161,1.20e-12,36;UBERON:0001044,1.70e-12,6;UBERON:0003293,1.70e-12,6;UBERON:0003294,1.70e-12,6;UBERON:0010047,1.70e-12,6;UBERON:0000167,1.70e-12,6;UBERON:0004815,1.21e-11,3;UBERON:0002031,1.21e-11,3;UBERON:0001949,3.09e-11,3;UBERON:0003729,1.52e-09,13;UBERON:0005157,2.10e-09,47;UBERON:0000989,4.91e-09,1;UBERON:0008811,4.91e-09,1;UBERON:0006258,4.91e-09,1;UBERON:0005876,4.91e-09,1;UBERON:0004874,4.91e-09,1;UBERON:0000076,4.98e-09,8;UBERON:0001004,6.99e-09,74;UBERON:0000964,7.57e-09,4;UBERON:0010409,7.57e-09,4;UBERON:0004348,7.57e-09,4;UBERON:0005427,7.57e-09,4;UBERON:0002365,1.71e-08,31;UBERON:0002330,1.71e-08,31;UBERON:0004121,2.02e-08,171;UBERON:0000924,2.02e-08,171;UBERON:0006601,2.02e-08,171;UBERON:0001708,2.06e-08,4;UBERON:0008895,2.06e-08,4;UBERON:0004119,5.09e-08,160;UBERON:0000925,5.09e-08,160;UBERON:0006595,5.09e-08,160;UBERON:0003408,1.09e-07,10;UBERON:0002185,2.54e-07,5;UBERON:0000365,4.70e-07,5;UBERON:0005153,5.84e-07,37;UBERON:0011159,6.76e-07,5 | |||
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|short_description=p@chr17:39738633..39738657,- | |||
}} | }} |
Latest revision as of 16:43, 25 July 2015
Short description: | p@chr17:39738633..39738657, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:39738633..39738657, - |
Coexpression cluster: | C3417_salivary_Corneal_tongue_Bronchial_esophagus_Esophageal_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data