FFCP PHASE1:Hg19::chr17:39738605..39738632,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:39738605..39738632,- to FFCP PHASE1:Hg19::chr17:39738605..39738632,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:39738605..39738632,- | |||
|coexpression_cluster_id=C207 | |||
|description=CAGE_peak_at_chr17:39738605..39738632,- | |||
|id=chr17:39738605..39738632,- | |||
|ontology_enrichment_celltype=CL:0002076!1.21e-32!43;CL:0000223!3.44e-22!59;CL:0002159!3.46e-20!13;CL:0002368!1.75e-19!13;CL:0002251!1.17e-17!21;CL:0000066!4.57e-16!254;CL:0002202!2.65e-13!9;CL:0002632!2.65e-13!9;CL:0002623!9.73e-12!3;CL:0000622!1.05e-11!5;CL:0002328!2.09e-11!3;CL:0002621!5.79e-11!3;CL:0000068!1.21e-10!3;CL:0000069!1.21e-10!3;CL:0000307!1.21e-10!3;CL:0000377!1.21e-10!3;CL:0002166!1.29e-10!3;CL:0002077!2.74e-10!33;CL:0000240!5.06e-10!6;CL:0000311!5.06e-10!6;CL:0000079!5.06e-10!6;CL:0000237!5.06e-10!6;CL:0000036!5.06e-10!6;CL:0000357!5.06e-10!6;CL:0000114!5.06e-10!6;CL:0000154!9.48e-10!6;CL:0000076!1.51e-08!62;CL:0002327!2.09e-08!4;CL:0000575!3.88e-08!2;CL:0000362!2.55e-07!8;CL:0000312!3.35e-07!5;CL:0000220!9.54e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0002623;1.46e-24;3!CL:0002251;7.83e-24;20!CL:0002328;1.08e-23;3!CL:0002076;4.82e-23;42!CL:0000240;2.04e-21;6!CL:0000311;2.04e-21;6!CL:0000079;2.04e-21;6!CL:0000237;2.04e-21;6!CL:0002327;1.81e-17;4!CL:0000575;2.11e-16;2!CL:0000312;5.21e-15;5!CL:0000622;5.59e-15;5!CL:0002368;1.23e-14;13!CL:0002202;5.93e-14;9!CL:0002632;5.93e-14;9!CL:0002159;6.08e-14;14!CL:0000154;1.42e-12;6!CL:0002621;3.69e-11;3!CL:0002252;2.82e-09;1!CL:0002336;3.87e-09;1!CL:0002261;3.87e-09;1!CL:0002170;3.87e-09;1!CL:0000362;1.47e-08;9!CL:0000150;1.52e-08;9!CL:0002537;4.92e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,8.17e-29,42;CL:0002623,1.65e-24,3;CL:0002251,6.63e-24,20;CL:0002328,9.24e-24,3;CL:0000240,1.94e-21,6;CL:0000311,1.94e-21,6;CL:0000079,1.94e-21,6;CL:0000237,1.94e-21,6;CL:0000036,1.94e-21,6;CL:0000357,1.94e-21,6;CL:0000114,1.94e-21,6;CL:0000223,3.15e-20,58;CL:0002327,1.97e-17,4;CL:0000575,2.19e-16,2;CL:0000312,5.21e-15,5;CL:0000622,6.00e-15,5;CL:0002368,1.08e-14,13;CL:0002202,5.74e-14,9;CL:0002632,5.74e-14,9;CL:0002159,6.16e-14,14;CL:0000154,1.51e-12,6;CL:0002621,3.25e-11,3;CL:0000066,5.83e-11,253;CL:0002252,2.60e-09,1;CL:0002336,3.58e-09,1;CL:0002261,3.58e-09,1;CL:0002170,3.58e-09,1;CL:0000362,1.47e-08,9;CL:0000150,1.59e-08,9;CL:0002537,5.00e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000357;2.04e-21;6!CL:0000114;2.04e-21;6!CL:0000223;1.12e-09;58 | |||
|ontology_enrichment_disease=DOID:1749!3.70e-13!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000166!2.06e-17!21;UBERON:0001004!3.30e-15!72;UBERON:0000165!5.27e-15!28;UBERON:0000930!5.27e-15!28;UBERON:0000161!2.11e-13!35;UBERON:0004815!2.09e-11!3;UBERON:0002031!2.09e-11!3;UBERON:0001949!5.79e-11!3;UBERON:0003729!8.96e-11!5;UBERON:0001444!9.32e-11!48;UBERON:0005631!1.13e-10!14;UBERON:0000158!1.13e-10!14;UBERON:0001723!1.57e-10!3;UBERON:0001033!1.57e-10!3;UBERON:0010056!1.57e-10!3;UBERON:0004119!5.57e-10!169;UBERON:0000925!5.57e-10!169;UBERON:0006595!5.57e-10!169;UBERON:0003102!2.00e-09!95;UBERON:0002185!1.20e-08!4;UBERON:0001911!2.09e-08!4;UBERON:0005333!2.09e-08!4;UBERON:0008425!2.09e-08!4;UBERON:0005311!2.09e-08!4;UBERON:0007196!2.74e-08!14;UBERON:0001558!2.74e-08!14;UBERON:0001708!4.61e-08!4;UBERON:0001704!4.61e-08!4;UBERON:0003343!9.50e-08!4;UBERON:0004785!9.50e-08!4;UBERON:0000065!1.21e-07!53;UBERON:0003124!1.22e-07!7;UBERON:0000974!1.42e-07!10;UBERON:0001007!4.09e-07!155;UBERON:0001555!4.09e-07!155;UBERON:0007026!4.09e-07!155;UBERON:0008814!5.91e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.08e-23;3!UBERON:0002031;1.08e-23;3!UBERON:0001911;1.81e-17;4!UBERON:0000165;9.49e-17;28!UBERON:0002185;1.83e-14;5!UBERON:0000161;2.76e-14;19!UBERON:0000166;2.76e-14;19!UBERON:0001044;1.42e-12;6!UBERON:0003293;1.42e-12;6!UBERON:0003294;1.42e-12;6!UBERON:0010047;1.42e-12;6!UBERON:0003408;1.42e-12;6!UBERON:0000167;1.42e-12;6!UBERON:0001949;3.69e-11;3!UBERON:0000485;1.74e-10;7!UBERON:0007811;3.59e-10;52!UBERON:0003729;1.30e-09;13!UBERON:0001041;2.65e-09;14!UBERON:0005795;7.55e-09;1!UBERON:0000964;1.18e-08;4!UBERON:0010409;1.18e-08;4!UBERON:0004807;1.40e-08;22!UBERON:0000033;1.64e-08;50!UBERON:0007196;1.96e-08;15!UBERON:0001558;1.96e-08;15!UBERON:0002365;2.58e-08;31!UBERON:0002330;2.58e-08;31!UBERON:0001444;3.95e-08;48!UBERON:0000153;4.85e-08;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,9.24e-24,3;UBERON:0002031,9.24e-24,3;UBERON:0001911,1.97e-17,4;UBERON:0005333,1.97e-17,4;UBERON:0008425,1.97e-17,4;UBERON:0005311,1.97e-17,4;UBERON:0000166,1.18e-16,22;UBERON:0000165,3.52e-16,29;UBERON:0000930,3.52e-16,29;UBERON:0002185,1.67e-14,5;UBERON:0001444,2.93e-14,49;UBERON:0001004,5.71e-13,74;UBERON:0001044,1.51e-12,6;UBERON:0003293,1.51e-12,6;UBERON:0003294,1.51e-12,6;UBERON:0010047,1.51e-12,6;UBERON:0000167,1.51e-12,6;UBERON:0000033,2.83e-12,56;UBERON:0001949,3.25e-11,3;UBERON:0004121,4.19e-11,171;UBERON:0000924,4.19e-11,171;UBERON:0006601,4.19e-11,171;UBERON:0003102,5.38e-11,99;UBERON:0000153,6.27e-11,62;UBERON:0007811,6.27e-11,62;UBERON:0000161,7.19e-10,36;UBERON:0003729,1.13e-09,13;UBERON:0005157,2.64e-09,47;UBERON:0000076,5.42e-09,8;UBERON:0000964,1.21e-08,4;UBERON:0010409,1.21e-08,4;UBERON:0004348,1.21e-08,4;UBERON:0005427,1.21e-08,4;UBERON:0002365,1.71e-08,31;UBERON:0002330,1.71e-08,31;UBERON:0007196,1.92e-08,15;UBERON:0001558,1.92e-08,15;UBERON:0000485,2.76e-08,9;UBERON:0004119,4.80e-08,160;UBERON:0000925,4.80e-08,160;UBERON:0006595,4.80e-08,160;UBERON:0003408,1.02e-07,10;UBERON:0005153,6.32e-07,37 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.27479102031034,1.50602959389125,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45718115317017,3.70784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92484646928281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12586938479627,0.545492241181669,1.72082757233402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.76777540136768,2.24803506515239,7.33861498604905,2.40729957412177,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.671928512795438,0.708875486211932,1.43293636324557,1.16253575405585,1.91691339582606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21251028578504,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802025881213139,0.552485933615378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.495854746082934,0,1.65896526242959,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,0.670302275535787,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,0,2.45728561679386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.230850775511391,0,0,0,0,0.957003479195758,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699397538597222,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,1.65085738669511,0.231051332300676,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52267479077163,5.4629912670064,4.14755797088455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0.535661815816973,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0,0.112131862580613,0,0,4.78976845373315,0.342233301085281,0,0,0,0,0,0,0,0,0,1.22068853494722,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.27479102031034,1.50602959389125,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45718115317017,3.70784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92484646928281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12586938479627,0.545492241181669,1.72082757233402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.76777540136768,2.24803506515239,7.33861498604905,2.40729957412177,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.671928512795438,0.708875486211932,1.43293636324557,1.16253575405585,1.91691339582606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21251028578504,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802025881213139,0.552485933615378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.495854746082934,0,1.65896526242959,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,0.670302275535787,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,0,2.45728561679386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.230850775511391,0,0,0,0,0.957003479195758,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699397538597222,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,1.65085738669511,0.231051332300676,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52267479077163,5.4629912670064,4.14755797088455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0.535661815816973,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0,0.112131862580613,0,0,4.78976845373315,0.342233301085281,0,0,0,0,0,0,0,0,0,1.22068853494722,0,0,0 | ||
|short_description=p@chr17:39738605..39738632,- | |||
}} | }} |
Latest revision as of 16:43, 25 July 2015
Short description: | p@chr17:39738605..39738632, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:39738605..39738632, - |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data