FFCP PHASE1:Hg19::chr17:34838949..34838959,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:34838949..34838959,- | |||
|coexpression_cluster_id=C373 | |coexpression_cluster_id=C373 | ||
|description=CAGE_peak_at_chr17:34838949..34838959,- | |description=CAGE_peak_at_chr17:34838949..34838959,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!1.18e-13!5;CL:0002535!3.21e-10!2 | |ontology_enrichment_celltype=CL:0002322!1.18e-13!5;CL:0002535!3.21e-10!2 | ||
|ontology_enrichment_celltype_v019=CL:0002535;9.38e-99;2!CL:0000333;3.26e-11;5 | |ontology_enrichment_celltype_v019=CL:0002535;9.38e-99;2!CL:0000333;3.26e-11;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002535,5.68e-99,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050687!4.92e-07!143;DOID:171!6.00e-07!10 | |ontology_enrichment_disease=DOID:0050687!4.92e-07!143;DOID:171!6.00e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:4362;2.22e-40;5!DOID:3193;7.14e-26;2!DOID:962;7.14e-26;2!DOID:1192;9.45e-18;3!DOID:169;1.44e-09;6!DOID:120;2.06e-08;27!DOID:193;6.67e-08;29 | |ontology_enrichment_disease_v019=DOID:4362;2.22e-40;5!DOID:3193;7.14e-26;2!DOID:962;7.14e-26;2!DOID:1192;9.45e-18;3!DOID:169;1.44e-09;6!DOID:120;2.06e-08;27!DOID:193;6.67e-08;29 | ||
|ontology_enrichment_disease_v019_2=DOID:4362,1.81e-40,5;DOID:3193,7.14e-26,2;DOID:962,7.14e-26,2;DOID:1192,9.46e-18,3;DOID:169,1.44e-09,6;DOID:120,1.98e-08,27;DOID:193,6.44e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0006955!3.21e-10!2;UBERON:0004801!3.21e-10!2 | |ontology_enrichment_uberon=UBERON:0006955!3.21e-10!2;UBERON:0004801!3.21e-10!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0006955;9.38e-99;2!UBERON:0004801;9.38e-99;2!UBERON:0000002;7.07e-34;6!UBERON:0001560;7.07e-34;6!UBERON:0003714;7.14e-26;2!UBERON:0000995;9.73e-13;17!UBERON:0003975;4.31e-12;18!UBERON:0003133;3.20e-11;44!UBERON:0000013;3.26e-11;5!UBERON:0002410;3.26e-11;5!UBERON:0004175;1.61e-10;21!UBERON:0000473;1.69e-07;8!UBERON:0003134;3.48e-07;33!UBERON:0005156;3.77e-07;59!UBERON:0000990;3.77e-07;59!UBERON:0000010;8.37e-07;8 | |ontology_enrichment_uberon_v019=UBERON:0006955;9.38e-99;2!UBERON:0004801;9.38e-99;2!UBERON:0000002;7.07e-34;6!UBERON:0001560;7.07e-34;6!UBERON:0003714;7.14e-26;2!UBERON:0000995;9.73e-13;17!UBERON:0003975;4.31e-12;18!UBERON:0003133;3.20e-11;44!UBERON:0000013;3.26e-11;5!UBERON:0002410;3.26e-11;5!UBERON:0004175;1.61e-10;21!UBERON:0000473;1.69e-07;8!UBERON:0003134;3.48e-07;33!UBERON:0005156;3.77e-07;59!UBERON:0000990;3.77e-07;59!UBERON:0000010;8.37e-07;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,5.68e-99,2;UBERON:0004801,5.68e-99,2;UBERON:0000002,5.98e-34,6;UBERON:0001560,5.98e-34,6;UBERON:0003714,7.14e-26,2;UBERON:0000013,3.26e-11,5;UBERON:0002410,3.26e-11,5;UBERON:0000995,1.53e-10,21;UBERON:0003133,3.42e-10,48;UBERON:0005795,4.14e-10,22;UBERON:0003975,4.14e-10,22;UBERON:0004175,5.06e-09,25;UBERON:0005156,1.88e-08,59;UBERON:0000990,1.88e-08,59;UBERON:0000473,1.80e-07,8;UBERON:0000010,8.37e-07,8 | |||
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| ||
|short_description=p@chr17:34838949..34838959,- | |short_description=p@chr17:34838949..34838959,- | ||
}} | }} |
Latest revision as of 15:46, 25 July 2015
Short description: | p@chr17:34838949..34838959, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:34838949..34838959, - |
Coexpression cluster: | C373_epidermoid_Prostate_cord_squamous_testicular_pharyngeal_testis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 5.68e-99 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 5.68e-99 | 2 |
cervix epithelium | 5.68e-99 | 2 |
uterine cervix | 5.98e-34 | 6 |
neck of organ | 5.98e-34 | 6 |
neural tissue | 7.14e-26 | 2 |
sympathetic nervous system | 3.26e-11 | 5 |
autonomic nervous system | 3.26e-11 | 5 |
uterus | 1.53e-10 | 21 |
reproductive organ | 3.42e-10 | 48 |
embryonic uterus | 4.14e-10 | 22 |
internal female genitalia | 4.14e-10 | 22 |
internal genitalia | 5.06e-09 | 25 |
reproductive structure | 1.88e-08 | 59 |
reproductive system | 1.88e-08 | 59 |
testis | 1.80e-07 | 8 |
peripheral nervous system | 8.37e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 1.81e-40 | 5 |
peripheral nerve sheath neoplasm | 7.14e-26 | 2 |
neurofibroma | 7.14e-26 | 2 |
peripheral nervous system neoplasm | 9.46e-18 | 3 |
neuroendocrine tumor | 1.44e-09 | 6 |
female reproductive organ cancer | 1.98e-08 | 27 |
reproductive organ cancer | 6.44e-08 | 29 |