FFCP PHASE1:Hg19::chr17:2908564..2908573,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:2908564..2908573,+ | |||
|coexpression_cluster_id=C34 | |coexpression_cluster_id=C34 | ||
|description=CAGE_peak_at_chr17:2908564..2908573,+ | |description=CAGE_peak_at_chr17:2908564..2908573,+ | ||
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|ontology_enrichment_celltype=CL:0002537!5.57e-11!5;CL:1000415!9.87e-08!2 | |ontology_enrichment_celltype=CL:0002537!5.57e-11!5;CL:1000415!9.87e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:1000415;5.96e-34;2 | |ontology_enrichment_celltype_v019=CL:1000415;5.96e-34;2 | ||
|ontology_enrichment_celltype_v019_2=CL:1000415,5.04e-34,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.23e-66;1!UBERON:0004872;8.16e-11;7!UBERON:0005795;5.73e-08;10 | |ontology_enrichment_development_v019=UBERON:0003124;1.23e-66;1!UBERON:0004872;8.16e-11;7!UBERON:0005795;5.73e-08;10 | ||
|ontology_enrichment_disease=DOID:1325!4.12e-08!7;DOID:3904!4.12e-08!7;DOID:3910!1.20e-07!2;DOID:4468!1.28e-07!2 | |ontology_enrichment_disease=DOID:1325!4.12e-08!7;DOID:3904!4.12e-08!7;DOID:3910!1.20e-07!2;DOID:4468!1.28e-07!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002046!1.15e-22!5;UBERON:0004117!1.15e-22!5;UBERON:0007689!1.15e-22!5;UBERON:0007123!1.15e-22!5;UBERON:0003091!1.15e-22!5;UBERON:0008814!2.35e-13!15;UBERON:0009722!1.19e-10!11;UBERON:0007690!1.19e-10!11;UBERON:0005631!1.03e-08!14;UBERON:0000158!1.03e-08!14;UBERON:0000305!4.27e-08!7;UBERON:0004903!1.20e-07!2;UBERON:0002173!1.20e-07!2;UBERON:0002186!1.20e-07!2;UBERON:0004871!3.45e-07!8;UBERON:0005911!8.11e-07!82 | |ontology_enrichment_uberon=UBERON:0002046!1.15e-22!5;UBERON:0004117!1.15e-22!5;UBERON:0007689!1.15e-22!5;UBERON:0007123!1.15e-22!5;UBERON:0003091!1.15e-22!5;UBERON:0008814!2.35e-13!15;UBERON:0009722!1.19e-10!11;UBERON:0007690!1.19e-10!11;UBERON:0005631!1.03e-08!14;UBERON:0000158!1.03e-08!14;UBERON:0000305!4.27e-08!7;UBERON:0004903!1.20e-07!2;UBERON:0002173!1.20e-07!2;UBERON:0002186!1.20e-07!2;UBERON:0004871!3.45e-07!8;UBERON:0005911!8.11e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0002110;3.66e-23;3!UBERON:0001987;7.35e-18;4!UBERON:0002294;9.43e-11;7!UBERON:0001173;9.43e-11;7 | |ontology_enrichment_uberon_v019=UBERON:0002110;3.66e-23;3!UBERON:0001987;7.35e-18;4!UBERON:0002294;9.43e-11;7!UBERON:0001173;9.43e-11;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,3.27e-23,3;UBERON:0006242,3.27e-23,3;UBERON:0001987,7.35e-18,4;UBERON:0004340,7.35e-18,4;UBERON:0003124,8.16e-11,7;UBERON:0002294,1.12e-08,9;UBERON:0001173,1.12e-08,9;UBERON:0004912,1.12e-08,9 | |||
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|short_description=p@chr17:2908564..2908573,+ | |short_description=p@chr17:2908564..2908573,+ | ||
}} | }} |
Latest revision as of 15:17, 25 July 2015
Short description: | p@chr17:2908564..2908573, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:2908564..2908573, + |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 5.04e-34 | 2 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 3.27e-23 | 3 |
gall bladder primordium | 3.27e-23 | 3 |
placenta | 7.35e-18 | 4 |
allantois | 7.35e-18 | 4 |
chorion | 8.16e-11 | 7 |
biliary system | 1.12e-08 | 9 |
biliary tree | 1.12e-08 | 9 |
biliary bud | 1.12e-08 | 9 |