FFCP PHASE1:Hg19::chr17:28799658..28799667,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:28799658..28799667,- | |||
|description=CAGE_peak_at_chr17:28799658..28799667,- | |description=CAGE_peak_at_chr17:28799658..28799667,- | ||
|id=chr17:28799658..28799667,- | |id=chr17:28799658..28799667,- | ||
|ontology_enrichment_celltype=CL:0002368!1.17e-24!13;CL:0002076!1.27e-20!43;CL:0000223!3.34e-14!59;CL:0002327!4.32e-12!4;CL:0000575!1.18e-11!2;CL:0002159!9.16e-10!13;CL:0002202!1.54e-09!9;CL:0002632!1.54e-09!9;CL:0000240!3.70e-08!6;CL:0000311!3.70e-08!6;CL:0000079!3.70e-08!6;CL:0000237!3.70e-08!6;CL:0000036!3.70e-08!6;CL:0000357!3.70e-08!6;CL:0000114!3.70e-08!6;CL:0002328!5.17e-08!3;CL:0000068!6.35e-08!3;CL:0000069!6.35e-08!3;CL:0000307!6.35e-08!3;CL:0000377!6.35e-08!3;CL:0002231!7.04e-08!3;CL:0000066!4.11e-07!254 | |ontology_enrichment_celltype=CL:0002368!1.17e-24!13;CL:0002076!1.27e-20!43;CL:0000223!3.34e-14!59;CL:0002327!4.32e-12!4;CL:0000575!1.18e-11!2;CL:0002159!9.16e-10!13;CL:0002202!1.54e-09!9;CL:0002632!1.54e-09!9;CL:0000240!3.70e-08!6;CL:0000311!3.70e-08!6;CL:0000079!3.70e-08!6;CL:0000237!3.70e-08!6;CL:0000036!3.70e-08!6;CL:0000357!3.70e-08!6;CL:0000114!3.70e-08!6;CL:0002328!5.17e-08!3;CL:0000068!6.35e-08!3;CL:0000069!6.35e-08!3;CL:0000307!6.35e-08!3;CL:0000377!6.35e-08!3;CL:0002231!7.04e-08!3;CL:0000066!4.11e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000575;5.69e-21;2!CL:0002623;1.31e-14;3!CL:0002328;1.83e-14;3!CL:0002368;3.12e-13;13!CL:0000622;2.63e-09;5!CL:0002076;3.91e-09;42!CL:0000154;5.73e-08;6 | |ontology_enrichment_celltype_v019=CL:0000575;5.69e-21;2!CL:0002623;1.31e-14;3!CL:0002328;1.83e-14;3!CL:0002368;3.12e-13;13!CL:0000622;2.63e-09;5!CL:0002076;3.91e-09;42!CL:0000154;5.73e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000575,6.96e-21,2;CL:0002623,1.22e-14,3;CL:0002328,1.60e-14,3;CL:0002368,3.03e-13,13;CL:0002076,2.45e-09,42;CL:0000622,2.53e-09,5;CL:0000154,5.54e-08,6;CL:0000223,5.78e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004872;6.04e-07;7 | |ontology_enrichment_development_v019=UBERON:0004872;6.04e-07;7 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001911!4.32e-12!4;UBERON:0005333!4.32e-12!4;UBERON:0008425!4.32e-12!4;UBERON:0005311!4.32e-12!4;UBERON:0003729!1.34e-09!5;UBERON:0001004!2.52e-09!72;UBERON:0005157!2.60e-08!51;UBERON:0004815!5.17e-08!3;UBERON:0002031!5.17e-08!3;UBERON:0000065!6.81e-08!53;UBERON:0005153!1.05e-07!37 | |ontology_enrichment_uberon=UBERON:0001911!4.32e-12!4;UBERON:0005333!4.32e-12!4;UBERON:0008425!4.32e-12!4;UBERON:0005311!4.32e-12!4;UBERON:0003729!1.34e-09!5;UBERON:0001004!2.52e-09!72;UBERON:0005157!2.60e-08!51;UBERON:0004815!5.17e-08!3;UBERON:0002031!5.17e-08!3;UBERON:0000065!6.81e-08!53;UBERON:0005153!1.05e-07!37 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.83e-14;3!UBERON:0004815;1.83e-14;3!UBERON:0002031;1.83e-14;3!UBERON:0000964;3.42e-11;4!UBERON:0010409;3.42e-11;4!UBERON:0004177;3.22e-09;5!UBERON:0005057;3.22e-09;5!UBERON:0002185;3.22e-09;5!UBERON:0001044;5.73e-08;6!UBERON:0003293;5.73e-08;6!UBERON:0003294;5.73e-08;6!UBERON:0010047;5.73e-08;6!UBERON:0003408;5.73e-08;6!UBERON:0000167;5.73e-08;6!UBERON:0000485;6.04e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0002106;1.83e-14;3!UBERON:0004815;1.83e-14;3!UBERON:0002031;1.83e-14;3!UBERON:0000964;3.42e-11;4!UBERON:0010409;3.42e-11;4!UBERON:0004177;3.22e-09;5!UBERON:0005057;3.22e-09;5!UBERON:0002185;3.22e-09;5!UBERON:0001044;5.73e-08;6!UBERON:0003293;5.73e-08;6!UBERON:0003294;5.73e-08;6!UBERON:0010047;5.73e-08;6!UBERON:0003408;5.73e-08;6!UBERON:0000167;5.73e-08;6!UBERON:0000485;6.04e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.60e-14,3;UBERON:0002031,1.60e-14,3;UBERON:0002106,1.83e-14,3;UBERON:0004854,1.83e-14,3;UBERON:0009034,1.83e-14,3;UBERON:0002095,1.83e-14,3;UBERON:0004782,1.83e-14,3;UBERON:0003281,1.83e-14,3;UBERON:0009664,1.83e-14,3;UBERON:0002296,1.83e-14,3;UBERON:0005602,1.83e-14,3;UBERON:0001179,1.83e-14,3;UBERON:0006293,1.83e-14,3;UBERON:0000964,3.79e-11,4;UBERON:0010409,3.79e-11,4;UBERON:0004348,3.79e-11,4;UBERON:0005427,3.79e-11,4;UBERON:0002185,2.97e-09,5;UBERON:0001044,5.54e-08,6;UBERON:0003293,5.54e-08,6;UBERON:0003294,5.54e-08,6;UBERON:0010047,5.54e-08,6;UBERON:0000167,5.54e-08,6;UBERON:0004177,6.04e-07,7;UBERON:0005057,6.04e-07,7 | |||
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|short_description=p@chr17:28799658..28799667,- | |short_description=p@chr17:28799658..28799667,- | ||
}} | }} |
Latest revision as of 15:16, 25 July 2015
Short description: | p@chr17:28799658..28799667, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:28799658..28799667, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 6.96e-21 | 2 |
acinar cell of salivary gland | 1.22e-14 | 3 |
bronchial epithelial cell | 1.60e-14 | 3 |
respiratory epithelial cell | 3.03e-13 | 13 |
endo-epithelial cell | 2.45e-09 | 42 |
acinar cell | 2.53e-09 | 5 |
protein secreting cell | 5.54e-08 | 6 |
endodermal cell | 5.78e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.60e-14 | 3 |
epithelium of bronchus | 1.60e-14 | 3 |
spleen | 1.83e-14 | 3 |
gastrointestinal system mesentery | 1.83e-14 | 3 |
stomach region | 1.83e-14 | 3 |
mesentery | 1.83e-14 | 3 |
gastrointestinal system serosa | 1.83e-14 | 3 |
mesentery of stomach | 1.83e-14 | 3 |
gut mesentery | 1.83e-14 | 3 |
dorsal mesentery | 1.83e-14 | 3 |
dorsal mesogastrium | 1.83e-14 | 3 |
peritoneal cavity | 1.83e-14 | 3 |
spleen primordium | 1.83e-14 | 3 |
cornea | 3.79e-11 | 4 |
eye surface | 3.79e-11 | 4 |
optic eminence | 3.79e-11 | 4 |
corneal primordium | 3.79e-11 | 4 |
bronchus | 2.97e-09 | 5 |
saliva-secreting gland | 5.54e-08 | 6 |
gland of oral region | 5.54e-08 | 6 |
gland of foregut | 5.54e-08 | 6 |
oral gland | 5.54e-08 | 6 |
oral cavity | 5.54e-08 | 6 |
hemopoietic organ | 6.04e-07 | 7 |
immune organ | 6.04e-07 | 7 |