FFCP PHASE1:Hg19::chr17:27044011..27044042,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:27044011..27044042,- | |||
|coexpression_cluster_id=C191 | |||
|description=CAGE_peak_at_chr17:27044011..27044042,- | |description=CAGE_peak_at_chr17:27044011..27044042,- | ||
|id=chr17:27044011..27044042,- | |id=chr17:27044011..27044042,- | ||
|ontology_enrichment_celltype=CL:0000055!7.47e-16!180;CL:0000680!2.89e-07!57;CL:0000056!2.89e-07!57;CL:0000355!2.89e-07!57;CL:0000057!2.95e-07!75;CL:0000183!6.62e-07!59 | |ontology_enrichment_celltype=CL:0000055!7.47e-16!180;CL:0000680!2.89e-07!57;CL:0000056!2.89e-07!57;CL:0000355!2.89e-07!57;CL:0000057!2.95e-07!75;CL:0000183!6.62e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002363;7.10e-11;2!CL:0002322;1.09e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,6.78e-11,2;CL:0000008,6.78e-11,2;CL:0002322,1.81e-09,5 | |||
|ontology_enrichment_development_v019=CL:0000008;7.10e-11;2!UBERON:0006215;7.51e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!1.89e-07!347;UBERON:0000914!2.95e-07!83;UBERON:0002329!2.95e-07!83;UBERON:0003077!2.95e-07!83;UBERON:0003059!2.95e-07!83;UBERON:0007282!2.95e-07!83;UBERON:0009618!2.95e-07!83;UBERON:0007285!2.95e-07!83;UBERON:0002346!9.38e-07!90 | |ontology_enrichment_uberon=UBERON:0000481!1.89e-07!347;UBERON:0000914!2.95e-07!83;UBERON:0002329!2.95e-07!83;UBERON:0003077!2.95e-07!83;UBERON:0003059!2.95e-07!83;UBERON:0007282!2.95e-07!83;UBERON:0009618!2.95e-07!83;UBERON:0007285!2.95e-07!83;UBERON:0002346!9.38e-07!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0003891;1.02e-11;4!UBERON:0003566;7.10e-11;2!UBERON:0001777;7.10e-11;2!UBERON:0010313;3.16e-08;10!UBERON:0002037;3.34e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003891,1.60e-11,4;UBERON:0003566,6.78e-11,2;UBERON:0001777,6.78e-11,2;UBERON:0010313,3.17e-08,10;UBERON:0002342,3.17e-08,10;UBERON:0005062,3.17e-08,10;UBERON:0002037,3.44e-08,6;UBERON:0006215,3.44e-08,6 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0.872338524100369,0,0,0,0.737201809504527,0.697801167972428,0,0,0.618831764800233,0.662794751455832,0.672325146451775,0,0,0,0.861847406537515,0,1.25381888591235,0.286235987131057,0.273748850145768,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,1.0843174571537,0.50133791063589,0.869079113764942,0,0,0.378139268656271,0.443458794925128,0.351339142772504,0.196468613246569,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.759783069987479,0,0,0.354668382198357,0.560677600142307,0,0,0.622422070799533,0.134710672069688,0.326923806226917,0.454072282934794,0.576175924479999,0,0.312160076830321,0,0.448346041655403,0.352303495931295,0.161872944368132,0,0,0.122834317311768,0,0,0.494533858557114,0.910161361938026,0,0,0.250237039743928,0,0.877955241761676,0.612975591598039,0.150238058906597,0.113432183160021,0,0.640672166455702,0.211931901159562,0,0.309157587715317,0.515281080091258,0.18611685633159,0.675105328965065,0.0974370051611986,0,0.736399189138395,1.61646056818812,1.77504796258307,0.201504196455281,0.339121184620975,0,0,0,1.09776335516636,0.530119073285941,1.04574548582567,0.10366105501537,2.01856680700503,1.09493207722749,0,0,0,0.928735856063958,0,0.118306800039844,0,0,0.220587945464788,0,0,0,0.196221465125346,0,0,0,0.8231480226628,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0.100528972411631,0,1.95484983186195,1.03993478527958,0,0.231860809950154,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0.1466765716419,0.387815147273333,0,0,0.26593811658487,0,1.02882949704857,0,0.799266537048298,0,0.542621605391443,0.823240336780769,0,0.710783897485092,0,0,0,0,0,0,0,0.479249710983165,1.14861935834114,0,0.434343920002738,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,1.50051156317903,0.813795071099207,0.207970861530807,0.892144943985809,0.473107245101804,0.234282829985426,0.601892199455438,2.27407504055985,0,1.32845119707087,0.921845842708516,0.0868836144680828,0.587403472388222,0.343143423810856,0,0,0,0.303127571446259,0,0,0.496215615637554,0,0.280660094433074,0,0,0,1.48418066444991,0.154209693802656,1.06537035187876,0.0821271560138091,0.519254429183621,0.464841513839837,0,0.200506470303285,0,0.803701137152247,0.546273504020151,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,1.00337954770971,0,0,0.223874754722178,0,0,0,0.656029291399411,0,0.103041011647722,0.183138929636687,0,0,0,0,0.676695028044854,0.770243085573222,0.921022048356777,0.137836572484531,0.429680979473094,0.435050081742686,0.0852266274161009,1.33548053470106,0,0,0,0,0.464845549297286,0,0,0.616067160352178,0,0.869932992075073,0,0,0.744316738719335,0,0,0.767693373934002,2.1396949401696,1.27281299170375,0,0,0,0.235624804691373,0.606547444719948,3.17020642346017,0,2.43816869544795,0.243713489631284,0,0.136499911407986,0.141405431953713,1.13008116620243,1.65409603063837,1.99031692572366,0,0,0,0.202910376962704,0.92947049429925,0.845086807596724,0,0.0982490410131212,0.35667105148125,0,0.211107635297664,0,0.379473173765715,1.39973888097993,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88743956579008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0.23874448473769,0.296964680832639,0,0,0.422008249231538,0,0.16480387422676,0.211125408127993,0.19924798825107,0,0,0,0,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.241192877250816,3.05163472634166,0.221158519862449,1.18219047581419,0.438770794307945,0.32681539055697,0.139423744278603,0.153900517007594,0,0,0,0,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468528891450678,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0,0.17472666824203,0.171986032471617,0,0,0.0821154570532092,0,0.176512253383001,0.451961481561065,0,0,0.253243183823515,0.782205530939212,0,0,0.599428828746391,0,0,0,0,0,0,0,0.209205692624666,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295282444544246,0,0,0.681017030557878,0.160753148465019,0.412618309791701,0,0,0,0.668245123238271,0,0,0.104909176269996,0,0.179287339332845,0,0.714695326373367,0,13.7305010333565,1.08599920350743,0,0.653174720218818,0,0,0.170388021785422,0.113312091520126,0,0,0.129282956361551,0.39669780522807,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0.488105059607853,0.250381861413,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0.251567901752575,0.889811221596536,0,1.20984739010591,0.621748802331122,0,0,0,0.465788870628778,0,0,0,0,0,0.406870733204662,0.181848659202559,0.214821114084977,0,0.398095888698616,0.400027764663154,0,0.336749488765919,2.52369796457302,0,0.428883182749851,0.260994291965212,7.25458961639272,0,0,0.537266523244462,9.57284486199014,0.657852148736121,0,0.192914038270915,0.337884881306145,0,0.690860683462397,0,0,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0,0,0,0,0.622077260032973,0,0,0,0.218419276384028,0,0.212574920101683,0.867550349813015,0,0.636008701306837,0,0,2.82140754952547,0.6124909547064,0.0642292250964595,0,0.159633859057151,0.615349092722265,0,0.276629009856872,0.322951291263702,0,0,0,0,0.115525666150338,0,0.690359926060101,0.198916222116275,0.225630985047772,0,0,0,0.163771917510097,0,0.337687923091973,0.781078098613847,0.206686796501184,0.317079050969534,0.546974809018219,0,0.496211178389294,0,0,0,0,0,0,0,0,0.342976018874837,0.135939465953663,0.394636641377094,0,0,0.078493092850514,0.785577949580009,0,3.65263488203798,0,0,0.142953088353313,0,1.04617282831313,0.521574816907738,0.801711364730253,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0.121917924982269,0,0,0,0.485710993059139,0,0,0,0.11294608203896,0,0.150962843566674,0,0.218559560503957,0,0.735444965261716,0,0,0,0.4226557275834,0.339854229375634,0,0,0,0,0,0,0,0,0,0.157771562193185,0.679914901909147,0,0.5290268405154,0,0.924351257262837,0,0.126166424835079,0.218531143927391,0.126698501011437,0.713921808193872,0.801652215796681,0.918948995348449,0.50141507858475,0.151557396436479,0.803892390468535,0,0,0,0.952257725854961,0,0,0.448527450322454,0.0636471582781649,0.404234377916439,0,0.684466602170562,0,0,0.332660356546013,0.162806537221949,0,1.9307228228694,0.0898252021065869,0,0.122241444182866,0.406896178315738,0,0,0 | |phase1_expression=0,0,0.281908808191942,0,0,0.872338524100369,0,0,0,0.737201809504527,0.697801167972428,0,0,0.618831764800233,0.662794751455832,0.672325146451775,0,0,0,0.861847406537515,0,1.25381888591235,0.286235987131057,0.273748850145768,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,1.0843174571537,0.50133791063589,0.869079113764942,0,0,0.378139268656271,0.443458794925128,0.351339142772504,0.196468613246569,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.759783069987479,0,0,0.354668382198357,0.560677600142307,0,0,0.622422070799533,0.134710672069688,0.326923806226917,0.454072282934794,0.576175924479999,0,0.312160076830321,0,0.448346041655403,0.352303495931295,0.161872944368132,0,0,0.122834317311768,0,0,0.494533858557114,0.910161361938026,0,0,0.250237039743928,0,0.877955241761676,0.612975591598039,0.150238058906597,0.113432183160021,0,0.640672166455702,0.211931901159562,0,0.309157587715317,0.515281080091258,0.18611685633159,0.675105328965065,0.0974370051611986,0,0.736399189138395,1.61646056818812,1.77504796258307,0.201504196455281,0.339121184620975,0,0,0,1.09776335516636,0.530119073285941,1.04574548582567,0.10366105501537,2.01856680700503,1.09493207722749,0,0,0,0.928735856063958,0,0.118306800039844,0,0,0.220587945464788,0,0,0,0.196221465125346,0,0,0,0.8231480226628,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0.100528972411631,0,1.95484983186195,1.03993478527958,0,0.231860809950154,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0.1466765716419,0.387815147273333,0,0,0.26593811658487,0,1.02882949704857,0,0.799266537048298,0,0.542621605391443,0.823240336780769,0,0.710783897485092,0,0,0,0,0,0,0,0.479249710983165,1.14861935834114,0,0.434343920002738,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,1.50051156317903,0.813795071099207,0.207970861530807,0.892144943985809,0.473107245101804,0.234282829985426,0.601892199455438,2.27407504055985,0,1.32845119707087,0.921845842708516,0.0868836144680828,0.587403472388222,0.343143423810856,0,0,0,0.303127571446259,0,0,0.496215615637554,0,0.280660094433074,0,0,0,1.48418066444991,0.154209693802656,1.06537035187876,0.0821271560138091,0.519254429183621,0.464841513839837,0,0.200506470303285,0,0.803701137152247,0.546273504020151,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,1.00337954770971,0,0,0.223874754722178,0,0,0,0.656029291399411,0,0.103041011647722,0.183138929636687,0,0,0,0,0.676695028044854,0.770243085573222,0.921022048356777,0.137836572484531,0.429680979473094,0.435050081742686,0.0852266274161009,1.33548053470106,0,0,0,0,0.464845549297286,0,0,0.616067160352178,0,0.869932992075073,0,0,0.744316738719335,0,0,0.767693373934002,2.1396949401696,1.27281299170375,0,0,0,0.235624804691373,0.606547444719948,3.17020642346017,0,2.43816869544795,0.243713489631284,0,0.136499911407986,0.141405431953713,1.13008116620243,1.65409603063837,1.99031692572366,0,0,0,0.202910376962704,0.92947049429925,0.845086807596724,0,0.0982490410131212,0.35667105148125,0,0.211107635297664,0,0.379473173765715,1.39973888097993,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88743956579008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0.23874448473769,0.296964680832639,0,0,0.422008249231538,0,0.16480387422676,0.211125408127993,0.19924798825107,0,0,0,0,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.241192877250816,3.05163472634166,0.221158519862449,1.18219047581419,0.438770794307945,0.32681539055697,0.139423744278603,0.153900517007594,0,0,0,0,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468528891450678,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0,0.17472666824203,0.171986032471617,0,0,0.0821154570532092,0,0.176512253383001,0.451961481561065,0,0,0.253243183823515,0.782205530939212,0,0,0.599428828746391,0,0,0,0,0,0,0,0.209205692624666,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295282444544246,0,0,0.681017030557878,0.160753148465019,0.412618309791701,0,0,0,0.668245123238271,0,0,0.104909176269996,0,0.179287339332845,0,0.714695326373367,0,13.7305010333565,1.08599920350743,0,0.653174720218818,0,0,0.170388021785422,0.113312091520126,0,0,0.129282956361551,0.39669780522807,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0.488105059607853,0.250381861413,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0.251567901752575,0.889811221596536,0,1.20984739010591,0.621748802331122,0,0,0,0.465788870628778,0,0,0,0,0,0.406870733204662,0.181848659202559,0.214821114084977,0,0.398095888698616,0.400027764663154,0,0.336749488765919,2.52369796457302,0,0.428883182749851,0.260994291965212,7.25458961639272,0,0,0.537266523244462,9.57284486199014,0.657852148736121,0,0.192914038270915,0.337884881306145,0,0.690860683462397,0,0,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0,0,0,0,0.622077260032973,0,0,0,0.218419276384028,0,0.212574920101683,0.867550349813015,0,0.636008701306837,0,0,2.82140754952547,0.6124909547064,0.0642292250964595,0,0.159633859057151,0.615349092722265,0,0.276629009856872,0.322951291263702,0,0,0,0,0.115525666150338,0,0.690359926060101,0.198916222116275,0.225630985047772,0,0,0,0.163771917510097,0,0.337687923091973,0.781078098613847,0.206686796501184,0.317079050969534,0.546974809018219,0,0.496211178389294,0,0,0,0,0,0,0,0,0.342976018874837,0.135939465953663,0.394636641377094,0,0,0.078493092850514,0.785577949580009,0,3.65263488203798,0,0,0.142953088353313,0,1.04617282831313,0.521574816907738,0.801711364730253,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0.121917924982269,0,0,0,0.485710993059139,0,0,0,0.11294608203896,0,0.150962843566674,0,0.218559560503957,0,0.735444965261716,0,0,0,0.4226557275834,0.339854229375634,0,0,0,0,0,0,0,0,0,0.157771562193185,0.679914901909147,0,0.5290268405154,0,0.924351257262837,0,0.126166424835079,0.218531143927391,0.126698501011437,0.713921808193872,0.801652215796681,0.918948995348449,0.50141507858475,0.151557396436479,0.803892390468535,0,0,0,0.952257725854961,0,0,0.448527450322454,0.0636471582781649,0.404234377916439,0,0.684466602170562,0,0,0.332660356546013,0.162806537221949,0,1.9307228228694,0.0898252021065869,0,0.122241444182866,0.406896178315738,0,0,0 | ||
|short_description=p@chr17:27044011..27044042,- | |short_description=p@chr17:27044011..27044042,- | ||
}} | }} |
Latest revision as of 15:02, 25 July 2015
Short description: | p@chr17:27044011..27044042, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:27044011..27044042, - |
Coexpression cluster: | C191_leiomyoblastoma_Mast_parietal_acute_bone_neuroepithelioma_embryonic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 6.78e-11 | 2 |
migratory cranial neural crest cell | 6.78e-11 | 2 |
embryonic stem cell | 1.81e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
stroma | 1.60e-11 | 4 |
head connective tissue | 6.78e-11 | 2 |
substantia propria of cornea | 6.78e-11 | 2 |
neural crest-derived structure | 3.17e-08 | 10 |
neural crest | 3.17e-08 | 10 |
neural fold | 3.17e-08 | 10 |
cerebellum | 3.44e-08 | 6 |
rhombic lip | 3.44e-08 | 6 |