FFCP PHASE1:Hg19::chr16:89268361..89268406,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:89268361..89268406,+ | |||
|description=CAGE_peak_at_chr16:89268361..89268406,+ | |description=CAGE_peak_at_chr16:89268361..89268406,+ | ||
|id=chr16:89268361..89268406,+ | |id=chr16:89268361..89268406,+ | ||
|ontology_enrichment_celltype=CL:0000039!4.42e-12!7;CL:0000586!4.42e-12!7;CL:0000240!8.94e-07!6;CL:0000311!8.94e-07!6;CL:0000079!8.94e-07!6;CL:0000237!8.94e-07!6;CL:0000036!8.94e-07!6;CL:0000357!8.94e-07!6;CL:0000114!8.94e-07!6 | |ontology_enrichment_celltype=CL:0000039!4.42e-12!7;CL:0000586!4.42e-12!7;CL:0000240!8.94e-07!6;CL:0000311!8.94e-07!6;CL:0000079!8.94e-07!6;CL:0000237!8.94e-07!6;CL:0000036!8.94e-07!6;CL:0000357!8.94e-07!6;CL:0000114!8.94e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000039;4.87e-18;7!CL:0000586;4.87e-18;7!CL:0000123;8.37e-12;2!CL:0000242;8.37e-12;2!CL:0000312;5.97e-10;5!CL:0000240;2.31e-08;6!CL:0000311;2.31e-08;6!CL:0000079;2.31e-08;6!CL:0000237;2.31e-08;6!CL:0002149;5.89e-08;6!CL:0002255;5.89e-08;6 | |ontology_enrichment_celltype_v019=CL:0000039;4.87e-18;7!CL:0000586;4.87e-18;7!CL:0000123;8.37e-12;2!CL:0000242;8.37e-12;2!CL:0000312;5.97e-10;5!CL:0000240;2.31e-08;6!CL:0000311;2.31e-08;6!CL:0000079;2.31e-08;6!CL:0000237;2.31e-08;6!CL:0002149;5.89e-08;6!CL:0002255;5.89e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.41e-18,7;CL:0000586,3.41e-18,7;CL:0000242,7.35e-12,2;CL:0000312,6.74e-10,5;CL:0000240,2.55e-08,6;CL:0000311,2.55e-08,6;CL:0000079,2.55e-08,6;CL:0000237,2.55e-08,6;CL:0000036,2.55e-08,6;CL:0000357,2.55e-08,6;CL:0000114,2.55e-08,6;CL:0000066,7.82e-08,253;CL:0002149,7.88e-08,6;CL:0002255,7.88e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.61e-16;3!UBERON:0009117;2.69e-12;10!UBERON:0005564;2.69e-12;10!CL:0000357;2.31e-08;6!CL:0000114;2.31e-08;6 | |ontology_enrichment_development_v019=UBERON:0006215;1.61e-16;3!UBERON:0009117;2.69e-12;10!UBERON:0005564;2.69e-12;10!CL:0000357;2.31e-08;6!CL:0000114;2.31e-08;6 | ||
|ontology_enrichment_disease=DOID:305!2.10e-15!106;DOID:0050687!1.33e-13!143;DOID:299!1.49e-08!25;DOID:0050615!6.64e-07!16;DOID:162!9.76e-07!235 | |ontology_enrichment_disease=DOID:305!2.10e-15!106;DOID:0050687!1.33e-13!143;DOID:299!1.49e-08!25;DOID:0050615!6.64e-07!16;DOID:162!9.76e-07!235 | ||
|ontology_enrichment_disease_v019=DOID:5093;1.27e-12;4!DOID:1612;1.27e-12;4!DOID:299;4.40e-09;25!DOID:3001;5.89e-08;6!DOID:305;1.38e-07;106 | |ontology_enrichment_disease_v019=DOID:5093;1.27e-12;4!DOID:1612;1.27e-12;4!DOID:299;4.40e-09;25!DOID:3001;5.89e-08;6!DOID:305;1.38e-07;106 | ||
|ontology_enrichment_disease_v019_2=DOID:305,2.74e-20,106;DOID:0050687,2.06e-18,143;DOID:5093,1.09e-12,4;DOID:1612,1.09e-12,4;DOID:162,6.98e-10,235;DOID:14566,1.48e-09,239;DOID:299,4.49e-09,25;DOID:3001,7.88e-08,6;DOID:7,3.18e-07,39;DOID:1799,9.81e-07,1;DOID:10165,9.81e-07,1;DOID:1798,9.81e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003101!3.13e-13!22;UBERON:0000079!3.13e-13!22;UBERON:0005153!2.45e-09!37;UBERON:0003135!4.30e-09!11;UBERON:0005156!2.29e-08!59;UBERON:0000990!2.29e-08!59;UBERON:0004921!4.82e-08!129;UBERON:0004185!4.82e-08!129;UBERON:0007023!7.43e-08!115;UBERON:0000473!7.44e-08!8;UBERON:0000464!8.63e-08!104;UBERON:0000077!1.34e-07!130;UBERON:0005911!1.47e-07!82;UBERON:0000466!1.82e-07!126;UBERON:0001007!3.35e-07!155;UBERON:0001555!3.35e-07!155;UBERON:0007026!3.35e-07!155;UBERON:0004119!7.71e-07!169;UBERON:0000925!7.71e-07!169;UBERON:0006595!7.71e-07!169;UBERON:0002048!8.55e-07!22;UBERON:0000117!8.55e-07!22;UBERON:0000171!8.55e-07!22;UBERON:0000170!8.55e-07!22;UBERON:0005597!8.55e-07!22;UBERON:0000118!8.55e-07!22 | |ontology_enrichment_uberon=UBERON:0003101!3.13e-13!22;UBERON:0000079!3.13e-13!22;UBERON:0005153!2.45e-09!37;UBERON:0003135!4.30e-09!11;UBERON:0005156!2.29e-08!59;UBERON:0000990!2.29e-08!59;UBERON:0004921!4.82e-08!129;UBERON:0004185!4.82e-08!129;UBERON:0007023!7.43e-08!115;UBERON:0000473!7.44e-08!8;UBERON:0000464!8.63e-08!104;UBERON:0000077!1.34e-07!130;UBERON:0005911!1.47e-07!82;UBERON:0000466!1.82e-07!126;UBERON:0001007!3.35e-07!155;UBERON:0001555!3.35e-07!155;UBERON:0007026!3.35e-07!155;UBERON:0004119!7.71e-07!169;UBERON:0000925!7.71e-07!169;UBERON:0006595!7.71e-07!169;UBERON:0002048!8.55e-07!22;UBERON:0000117!8.55e-07!22;UBERON:0000171!8.55e-07!22;UBERON:0000170!8.55e-07!22;UBERON:0005597!8.55e-07!22;UBERON:0000118!8.55e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.01e-15;8!UBERON:0003135;3.70e-11;11!UBERON:0003101;2.91e-10;22!UBERON:0000079;2.91e-10;22!UBERON:0002037;1.73e-08;6 | |ontology_enrichment_uberon_v019=UBERON:0000473;2.01e-15;8!UBERON:0003135;3.70e-11;11!UBERON:0003101;2.91e-10;22!UBERON:0000079;2.91e-10;22!UBERON:0002037;1.73e-08;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.53e-15,8;UBERON:0003135,3.04e-11,11;UBERON:0003101,3.00e-10,22;UBERON:0000079,3.00e-10,22;UBERON:0002037,1.71e-08,6;UBERON:0006215,1.71e-08,6 | |||
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| ||
|short_description=p@chr16:89268361..89268406,+ | |short_description=p@chr16:89268361..89268406,+ | ||
}} | }} |
Latest revision as of 13:26, 25 July 2015
Short description: | p@chr16:89268361..89268406, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:89268361..89268406, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.41e-18 | 7 |
germ cell | 3.41e-18 | 7 |
Merkel cell | 7.35e-12 | 2 |
keratinocyte | 6.74e-10 | 5 |
stratified squamous epithelial cell | 2.55e-08 | 6 |
keratin accumulating cell | 2.55e-08 | 6 |
stratified epithelial cell | 2.55e-08 | 6 |
keratinizing barrier epithelial cell | 2.55e-08 | 6 |
epithelial fate stem cell | 2.55e-08 | 6 |
stratified epithelial stem cell | 2.55e-08 | 6 |
surface ectodermal cell | 2.55e-08 | 6 |
epithelial cell | 7.82e-08 | 253 |
epithelial cell of uterus | 7.88e-08 | 6 |
stromal cell of endometrium | 7.88e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
testis | 1.53e-15 | 8 |
male reproductive organ | 3.04e-11 | 11 |
male organism | 3.00e-10 | 22 |
male reproductive system | 3.00e-10 | 22 |
cerebellum | 1.71e-08 | 6 |
rhombic lip | 1.71e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.74e-20 | 106 |
cell type cancer | 2.06e-18 | 143 |
thoracic cancer | 1.09e-12 | 4 |
breast cancer | 1.09e-12 | 4 |
cancer | 6.98e-10 | 235 |
disease of cellular proliferation | 1.48e-09 | 239 |
adenocarcinoma | 4.49e-09 | 25 |
female reproductive endometrioid cancer | 7.88e-08 | 6 |
disease of anatomical entity | 3.18e-07 | 39 |
islet cell tumor | 9.81e-07 | 1 |
endocrine pancreas cancer | 9.81e-07 | 1 |
pancreatic endocrine carcinoma | 9.81e-07 | 1 |