FFCP PHASE1:Hg19::chr16:89241500..89241514,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:89241500..89241514,+ | |||
|coexpression_cluster_id=C163 | |coexpression_cluster_id=C163 | ||
|description=CAGE_peak_at_chr16:89241500..89241514,+ | |description=CAGE_peak_at_chr16:89241500..89241514,+ | ||
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|ontology_enrichment_celltype=CL:0000188!4.69e-13!9;CL:0000515!1.88e-11!4;CL:0002540!1.55e-07!6;CL:0000062!6.40e-07!11;CL:0000375!6.40e-07!11;CL:0000335!6.40e-07!11 | |ontology_enrichment_celltype=CL:0000188!4.69e-13!9;CL:0000515!1.88e-11!4;CL:0002540!1.55e-07!6;CL:0000062!6.40e-07!11;CL:0000375!6.40e-07!11;CL:0000335!6.40e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0002575;1.75e-12;2!CL:0002262;2.74e-12;2!CL:1000398;2.74e-12;2!CL:0000632;9.31e-09;3!CL:0000515;1.26e-08;3!CL:0000669;7.07e-07;4!CL:0000056;8.85e-07;4 | |ontology_enrichment_celltype_v019=CL:0002575;1.75e-12;2!CL:0002262;2.74e-12;2!CL:1000398;2.74e-12;2!CL:0000632;9.31e-09;3!CL:0000515;1.26e-08;3!CL:0000669;7.07e-07;4!CL:0000056;8.85e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002575,1.85e-12,2;CL:0002262,2.90e-12,2;CL:1000398,2.90e-12,2;CL:0000632,8.96e-09,3;CL:0000669,7.27e-07,4;CL:0000515,8.14e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000515;8.85e-07;4 | |ontology_enrichment_development_v019=CL:0000515;8.85e-07;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!6.52e-07!3;UBERON:0004854!6.52e-07!3;UBERON:0009034!6.52e-07!3;UBERON:0002095!6.52e-07!3;UBERON:0004782!6.52e-07!3;UBERON:0003281!6.52e-07!3;UBERON:0009664!6.52e-07!3;UBERON:0002296!6.52e-07!3;UBERON:0005602!6.52e-07!3;UBERON:0001179!6.52e-07!3;UBERON:0006293!6.52e-07!3 | |ontology_enrichment_uberon=UBERON:0002106!6.52e-07!3;UBERON:0004854!6.52e-07!3;UBERON:0009034!6.52e-07!3;UBERON:0002095!6.52e-07!3;UBERON:0004782!6.52e-07!3;UBERON:0003281!6.52e-07!3;UBERON:0009664!6.52e-07!3;UBERON:0002296!6.52e-07!3;UBERON:0005602!6.52e-07!3;UBERON:0001179!6.52e-07!3;UBERON:0006293!6.52e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;4.31e-13;16!UBERON:0002036;4.31e-13;16!UBERON:0001281;2.74e-12;2!UBERON:0003497;2.74e-12;2!UBERON:0003909;2.74e-12;2!UBERON:0003835;2.74e-12;2!UBERON:0001280;1.26e-08;3!UBERON:0004647;1.26e-08;3!UBERON:0003343;8.85e-07;4!UBERON:0004785;8.85e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0001134;4.31e-13;16!UBERON:0002036;4.31e-13;16!UBERON:0001281;2.74e-12;2!UBERON:0003497;2.74e-12;2!UBERON:0003909;2.74e-12;2!UBERON:0003835;2.74e-12;2!UBERON:0001280;1.26e-08;3!UBERON:0004647;1.26e-08;3!UBERON:0003343;8.85e-07;4!UBERON:0004785;8.85e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,2.90e-12,2;UBERON:0003497,2.90e-12,2;UBERON:0003909,2.90e-12,2;UBERON:0003835,2.90e-12,2;UBERON:0001280,1.30e-08,3;UBERON:0004647,1.30e-08,3;UBERON:0005171,1.30e-08,3;UBERON:0003343,7.70e-07,4;UBERON:0004785,7.70e-07,4 | |||
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|short_description=p@chr16:89241500..89241514,+ | |short_description=p@chr16:89241500..89241514,+ | ||
}} | }} |
Latest revision as of 13:25, 25 July 2015
Short description: | p@chr16:89241500..89241514, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:89241500..89241514, + |
Coexpression cluster: | C163_Skeletal_skeletal_Pericytes_Hepatic_rhabdomyosarcoma_throat_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 1.85e-12 | 2 |
endothelial cell of sinusoid | 2.90e-12 | 2 |
endothelial cell of hepatic sinusoid | 2.90e-12 | 2 |
hepatic stellate cell | 8.96e-09 | 3 |
pericyte cell | 7.27e-07 | 4 |
skeletal muscle myoblast | 8.14e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 2.90e-12 | 2 |
abdomen blood vessel | 2.90e-12 | 2 |
sinusoid | 2.90e-12 | 2 |
abdominal segment blood vessel | 2.90e-12 | 2 |
liver parenchyma | 1.30e-08 | 3 |
liver lobule | 1.30e-08 | 3 |
hepatic duct | 1.30e-08 | 3 |
mucosa of oral region | 7.70e-07 | 4 |
respiratory system mucosa | 7.70e-07 | 4 |