FFCP PHASE1:Hg19::chr16:87865215..87865228,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:87865215..87865228,- | |||
|coexpression_cluster_id=C570 | |||
|description=CAGE_peak_at_chr16:87865215..87865228,- | |description=CAGE_peak_at_chr16:87865215..87865228,- | ||
|id=chr16:87865215..87865228,- | |id=chr16:87865215..87865228,- | ||
|ontology_enrichment_celltype=CL:0000066!6.62e-16!254;CL:0002076!8.65e-13!43;CL:0000223!6.73e-10!59;CL:0002077!2.02e-09!33;CL:0000063!4.71e-08!578;CL:0002368!2.67e-07!13 | |ontology_enrichment_celltype=CL:0000066!6.62e-16!254;CL:0002076!8.65e-13!43;CL:0000223!6.73e-10!59;CL:0002077!2.02e-09!33;CL:0000063!4.71e-08!578;CL:0002368!2.67e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002567;1.65e-18;3!CL:0000317;2.87e-12;2!CL:1000448;2.87e-12;2!CL:0002308;2.87e-12;2!CL:0002140;2.87e-12;2!CL:0002077;6.12e-11;34!CL:0000362;3.18e-10;9!CL:0002159;5.14e-10;14!CL:0000148;1.37e-09;10!CL:0002231;3.75e-09;3!CL:0000147;7.22e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,2.50e-18,3;CL:0000317,3.62e-12,2;CL:1000448,3.62e-12,2;CL:0002308,3.62e-12,2;CL:0002140,3.62e-12,2;CL:0002077,4.82e-12,34;CL:0000362,4.61e-10,9;CL:0002159,6.96e-10,14;CL:0000148,2.06e-09,10;CL:0000541,2.06e-09,10;CL:0002231,3.99e-09,3;CL:0002076,7.00e-08,42;CL:0000066,2.95e-07,253;CL:0002327,8.95e-07,4;CL:0000147,9.56e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;2.87e-12;2!UBERON:0007771;2.87e-12;2!UBERON:0003297;2.87e-12;2!UBERON:0001821;2.87e-12;2!UBERON:0003487;2.87e-12;2!UBERON:0001820;2.87e-12;2!UBERON:0001003;2.48e-09;15!UBERON:0007376;2.48e-09;15!UBERON:0003343;7.85e-07;4!UBERON:0004785;7.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,3.62e-12,2;UBERON:0007771,3.62e-12,2;UBERON:0003297,3.62e-12,2;UBERON:0001821,3.62e-12,2;UBERON:0003487,3.62e-12,2;UBERON:0001820,3.62e-12,2;UBERON:0005089,3.62e-12,2;UBERON:0005088,3.62e-12,2;UBERON:0001003,3.23e-09,15;UBERON:0007376,3.23e-09,15;UBERON:0007383,3.23e-09,15;UBERON:0003343,7.75e-07,4;UBERON:0004785,7.75e-07,4;UBERON:0001911,8.95e-07,4;UBERON:0005333,8.95e-07,4;UBERON:0008425,8.95e-07,4;UBERON:0005311,8.95e-07,4 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0.791300934685361,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0.309706370895104,0.575384784644301,0.256160706529101,0,0.344745680736619,0.645484683583826,0,0.376484679085209,0,0.449446968890169,1.22433556948361,1.28371610830437,0.639337125799041,0,0,0,1.16083695451434,0.56738522469114,2.4912889959823,0,0,0.217188844705117,1.21079900526674,0.736555271975129,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0.270803863765016,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0.267440195783507,0,0,0,0.12786256184353,1.0843174571537,0,0.144846518960824,0,0,0,0.443458794925128,0.087834785693126,0.0654895377488563,0.364295288292542,2.22470665670658,0,0,0,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0.872188104285069,0,0.12663051166458,0,0.286836620748814,0,0,0,0.49333509683432,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0.718618141816238,0,0,0,0,0.612975591598039,0.300476117813194,0,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0.0974370051611986,0,0.184099797284599,0,0,0.10075209822764,0.339121184620975,0.386521706326594,0.545492241181669,0.573609190778008,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0.354920400119532,0.505754070234305,0.482022059766964,0.992645754591546,0,0.237270619111097,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,1.20725313949488,1.1240175325762,0.703702806881416,0.833296006426766,0,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0,1.45316969256981,1.91691339582606,0,0.264145302039678,0,0,0.25248486685276,0.190493682876507,1.14596527667483,4.68869788840188,3.4214489204541,1.02827492703324,0.300343057843917,0.857479297891735,0,0,0.07333828582095,0.258543431515556,3.57656445851882,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.718874566474748,0,0,0,0,0,0.112085143993527,0.394061520403854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0.106727557803444,0.909382714338778,1.66435439510497,0.604780586659361,0,0.153461973288062,0.561320188866147,0,0,0.160853921143607,0,0,0.177561725313127,0,0.519254429183621,0,0.966875596732978,3.00759705454927,5.98526428083326,0.459257792658427,0.182091168006717,0.524497659837696,0,0.0770153371044148,0,0,0,0,0,0,0,0,0.501689773854853,0.509752546090077,0,0.447749509444357,0.219259876645935,0.261435451024901,0,0,0.976135183992909,0,0,0,1.14853107599234,1.30012049207304,0,0.870036464629098,0,0,0,0,0,0.170453254832202,0.267096106940212,3.30569830721956,0.576570202095319,0.255225424989168,1.8208400553999,0.464845549297286,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0.565621727814851,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0.329294892959902,0,0,0.673554789078584,0,2.17781969722645,0,0.86101074534246,0,1.33029046061003,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0.245040215981032,0,0.144269212976445,0.0711418433484141,0,0,0,0.211673582723883,0,0,0,0.156679895773023,0,0,0.321176150207399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0.307160702099232,0,0,0.222617410045812,0,0,0,0,0,0.102268682502155,0,0,0.0898683511473268,0.895105873378046,0,0,0,0,0,0,0,0.7812832832557,0,0,0.682760689712998,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0.653630781113941,0.975966209950223,0,0.227884111694002,0.23056390438806,0.628303510868405,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0.141353071433941,0,0,0,0,0,0.247127877893006,0.208843899010911,0,0,0,0.182454789215666,0.19566461893209,0,0,0,0.30607276163049,0,1.20258735531594,0,0,0,0,0,0,0.277349346026277,1.56203764501618,0,0.174118413160805,0,0,0,0.146178634172371,0.0821154570532092,0.0969890164884194,0,0,0.274083849293502,0,0,0,0.160317640503067,0,0.19980960958213,0,0,0.171594997861965,0.576219191952599,0,0.942776138467182,0,0,0.509991088181609,0.288950589901519,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0,0,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0,0,0,0,0.321506296930038,0.137539436597234,0.83088067605837,0,0,0,0.335434687599266,0,0,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0.197611631897944,0.243585196761792,0,0,0,0,0,0.314108192500469,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0.454947352624943,2.28372266835974,0.235265819698172,0,0,0.149254802886874,0,0,0,0,0,0.228840068396924,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0.400027764663154,0,0,0,0,0,1.04397716786085,0,0.694567422971502,0,0,0,0.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| ||
|short_description=p@chr16:87865215..87865228,- | |short_description=p@chr16:87865215..87865228,- | ||
}} | }} |
Latest revision as of 13:12, 25 July 2015
Short description: | p@chr16:87865215..87865228, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:87865215..87865228, - |
Coexpression cluster: | C570_oral_Prostate_Esophageal_Mammary_Corneal_Keratinocyte_Small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 2.50e-18 | 3 |
sebum secreting cell | 3.62e-12 | 2 |
epithelial cell of sweat gland | 3.62e-12 | 2 |
epithelial cell of skin gland | 3.62e-12 | 2 |
acinar cell of sebaceous gland | 3.62e-12 | 2 |
ecto-epithelial cell | 4.82e-12 | 34 |
epidermal cell | 4.61e-10 | 9 |
general ecto-epithelial cell | 6.96e-10 | 14 |
melanocyte | 2.06e-09 | 10 |
melanoblast | 2.06e-09 | 10 |
epithelial cell of prostate | 3.99e-09 | 3 |
endo-epithelial cell | 7.00e-08 | 42 |
epithelial cell | 2.95e-07 | 253 |
mammary gland epithelial cell | 8.95e-07 | 4 |
pigment cell | 9.56e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
skin gland | 3.62e-12 | 2 |
epidermis gland | 3.62e-12 | 2 |
gland of integumental system | 3.62e-12 | 2 |
sebaceous gland | 3.62e-12 | 2 |
skin sebaceous gland | 3.62e-12 | 2 |
sweat gland | 3.62e-12 | 2 |
sweat gland placode | 3.62e-12 | 2 |
sebaceous gland placode | 3.62e-12 | 2 |
skin epidermis | 3.23e-09 | 15 |
outer epithelium | 3.23e-09 | 15 |
enveloping layer of ectoderm | 3.23e-09 | 15 |
mucosa of oral region | 7.75e-07 | 4 |
respiratory system mucosa | 7.75e-07 | 4 |
mammary gland | 8.95e-07 | 4 |
mammary bud | 8.95e-07 | 4 |
mammary ridge | 8.95e-07 | 4 |
mammary placode | 8.95e-07 | 4 |