FFCP PHASE1:Hg19::chr16:87369953..87369959,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:87369953..87369959,-
|short_description=p@chr16:87369953..87369959,-
|description=CAGE_peak_at_chr16:87369953..87369959,-
|association_with_transcript=NA
...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:87369953..87369959,- | |||
|coexpression_cluster_id=C899 | |||
|description=CAGE_peak_at_chr16:87369953..87369959,- | |||
|id=chr16:87369953..87369959,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.16e-117;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.66e-26!57;UBERON:0005068!5.66e-26!57;UBERON:0006241!5.66e-26!57;UBERON:0007135!5.66e-26!57;UBERON:0002616!4.70e-25!59;UBERON:0000955!1.17e-24!69;UBERON:0006238!1.17e-24!69;UBERON:0001017!5.27e-24!82;UBERON:0000007!7.15e-24!2;UBERON:0003075!4.26e-23!86;UBERON:0007284!4.26e-23!86;UBERON:0005743!7.91e-23!86;UBERON:0002346!5.34e-22!90;UBERON:0000073!1.55e-20!94;UBERON:0001016!1.55e-20!94;UBERON:0007023!1.11e-19!115;UBERON:0002037!1.15e-17!6;UBERON:0006215!1.15e-17!6;UBERON:0000200!5.45e-17!6;UBERON:0002780!5.25e-16!41;UBERON:0001890!5.25e-16!41;UBERON:0006240!5.25e-16!41;UBERON:0002771!1.14e-15!3;UBERON:0003080!1.30e-15!42;UBERON:0000033!1.76e-15!123;UBERON:0004733!2.37e-15!12;UBERON:0002028!2.37e-15!12;UBERON:0007277!2.37e-15!12;UBERON:0001894!4.58e-15!7;UBERON:0006222!4.58e-15!7;UBERON:0000153!1.11e-14!129;UBERON:0007811!1.11e-14!129;UBERON:0004732!3.43e-14!13;UBERON:0003056!2.46e-13!61;UBERON:0004121!1.77e-12!169;UBERON:0003296!1.97e-12!4;UBERON:0010133!1.97e-12!4;UBERON:0002902!2.20e-12!1;UBERON:0009899!2.20e-12!1;UBERON:0003076!2.48e-12!15;UBERON:0003057!2.48e-12!15;UBERON:0000924!3.79e-12!173;UBERON:0006601!3.79e-12!173;UBERON:0002581!4.31e-12!1;UBERON:0002680!5.63e-12!9;UBERON:0001895!5.63e-12!9;UBERON:0010092!5.63e-12!9;UBERON:0001950!1.37e-08!20;UBERON:0001869!2.86e-08!32;UBERON:0002791!5.05e-08!33;UBERON:0002619!7.37e-08!22;UBERON:0002020!8.64e-08!34;UBERON:0003528!8.64e-08!34;UBERON:0001893!8.64e-08!34;UBERON:0000956!5.69e-07!25;UBERON:0000203!5.69e-07!25;UBERON:0001873!6.07e-07!2;UBERON:0010122!6.07e-07!2;UBERON:0002360!7.61e-07!2;UBERON:0000094!7.61e-07!2;UBERON:0007645!7.61e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;2.34e-79;2!UBERON:0002037;1.82e-59;6!UBERON:0003296;2.22e-40;4!UBERON:0010133;2.22e-40;4!UBERON:0002680;4.97e-40;9!UBERON:0001895;4.97e-40;9!UBERON:0004733;2.71e-30;12!UBERON:0002028;2.71e-30;12!UBERON:0004732;4.82e-28;13!UBERON:0001894;1.28e-23;7!UBERON:0000073;3.61e-15;53!UBERON:0002616;3.61e-15;53!UBERON:0000955;2.91e-10;68!UBERON:0001016;3.87e-10;83!UBERON:0001017;8.02e-09;75!UBERON:0007023;3.82e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.56e-79,2;UBERON:0002037,2.22e-59,6;UBERON:0006215,2.22e-59,6;UBERON:0003296,1.81e-40,4;UBERON:0010133,1.81e-40,4;UBERON:0002680,5.68e-40,9;UBERON:0001895,5.68e-40,9;UBERON:0010092,5.68e-40,9;UBERON:0004733,2.99e-30,12;UBERON:0002028,2.99e-30,12;UBERON:0007277,2.99e-30,12;UBERON:0004732,5.28e-28,13;UBERON:0003076,2.09e-24,15;UBERON:0003057,2.09e-24,15;UBERON:0001894,1.14e-23,7;UBERON:0006222,1.14e-23,7;UBERON:0000073,6.22e-19,53;UBERON:0002616,6.22e-19,53;UBERON:0001049,5.63e-18,56;UBERON:0005068,5.63e-18,56;UBERON:0006241,5.63e-18,56;UBERON:0007135,5.63e-18,56;UBERON:0000955,9.02e-15,68;UBERON:0006238,9.02e-15,68;UBERON:0001017,1.45e-12,81;UBERON:0003075,1.45e-12,82;UBERON:0007284,1.45e-12,82;UBERON:0002346,5.13e-12,86;UBERON:0001016,2.13e-11,89;UBERON:0010371,4.61e-10,104;UBERON:0007023,2.58e-09,114;UBERON:0010314,4.60e-08,132 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,1.52581736317083,2.43274371848694,1.47773809476774,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.332787154610557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82089681270989,4.32558163567465,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,1.52581736317083,2.43274371848694,1.47773809476774,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.332787154610557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82089681270989,4.32558163567465,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:87369953..87369959,- | |||
}} | }} |
Latest revision as of 13:09, 25 July 2015
Short description: | p@chr16:87369953..87369959, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:87369953..87369959, - |
Coexpression cluster: | C899_pituitary_cerebellum_occipital_parietal_testicular_brain_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 1.56e-79 | 2 |
cerebellum | 2.22e-59 | 6 |
rhombic lip | 2.22e-59 | 6 |
gland of diencephalon | 1.81e-40 | 4 |
neuroendocrine gland | 1.81e-40 | 4 |
regional part of metencephalon | 5.68e-40 | 9 |
metencephalon | 5.68e-40 | 9 |
future metencephalon | 5.68e-40 | 9 |
segmental subdivision of hindbrain | 2.99e-30 | 12 |
hindbrain | 2.99e-30 | 12 |
presumptive hindbrain | 2.99e-30 | 12 |
segmental subdivision of nervous system | 5.28e-28 | 13 |
posterior neural tube | 2.09e-24 | 15 |
chordal neural plate | 2.09e-24 | 15 |
diencephalon | 1.14e-23 | 7 |
future diencephalon | 1.14e-23 | 7 |
regional part of nervous system | 6.22e-19 | 53 |
regional part of brain | 6.22e-19 | 53 |
neural tube | 5.63e-18 | 56 |
neural rod | 5.63e-18 | 56 |
future spinal cord | 5.63e-18 | 56 |
neural keel | 5.63e-18 | 56 |
brain | 9.02e-15 | 68 |
future brain | 9.02e-15 | 68 |
central nervous system | 1.45e-12 | 81 |
neural plate | 1.45e-12 | 82 |
presumptive neural plate | 1.45e-12 | 82 |
neurectoderm | 5.13e-12 | 86 |
nervous system | 2.13e-11 | 89 |
ecto-epithelium | 4.61e-10 | 104 |
adult organism | 2.58e-09 | 114 |
structure with developmental contribution from neural crest | 4.60e-08 | 132 |