FFCP PHASE1:Hg19::chr16:84600344..84600356,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:84600344..84600356,-
|short_description=p@chr16:84600344..84600356,-
|description=CAGE_peak_at_chr16:84600344..84600356,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:84600344..84600356,- | |||
|coexpression_cluster_id=C842 | |||
|description=CAGE_peak_at_chr16:84600344..84600356,- | |||
|id=chr16:84600344..84600356,- | |||
|ontology_enrichment_celltype=CL:0000766!9.20e-23!76;CL:0002057!2.18e-22!42;CL:0002194!1.65e-20!63;CL:0000576!1.65e-20!63;CL:0000040!1.65e-20!63;CL:0000559!1.65e-20!63;CL:0000860!1.03e-19!45;CL:0002009!6.92e-19!65;CL:0000839!1.03e-17!70;CL:0000557!5.14e-17!71;CL:0000144!1.34e-13!625;CL:0000738!3.02e-12!140;CL:0000548!3.48e-12!679;CL:0000004!3.48e-12!679;CL:0000255!3.48e-12!679;CL:0002371!4.21e-12!591;CL:0000012!6.36e-12!682;CL:0000003!6.86e-12!722;CL:0002087!2.76e-11!119;CL:0000763!1.05e-10!112;CL:0000049!1.05e-10!112;CL:0000048!2.45e-10!430;CL:0000034!4.46e-10!444;CL:0000723!4.74e-10!436;CL:0002031!3.87e-09!124;CL:0000063!5.90e-08!578;CL:0002320!8.17e-08!365;CL:0000134!3.24e-07!358;CL:0000222!5.68e-07!119;CL:0002032!9.21e-07!165;CL:0000837!9.21e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.52e-26;33!CL:0002057;2.52e-26;33!CL:0000576;9.86e-25;48!CL:0000473;1.09e-22;39!CL:0000234;1.09e-22;39!CL:0000766;1.10e-17;69!CL:1000746;2.26e-08;7!CL:1000612;2.26e-08;7!CL:0002393;2.44e-08;6!CL:0002397;2.44e-08;6!CL:0000763;1.32e-07;100!CL:0002188;9.45e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.26e-41,48;CL:0000234,2.26e-41,48;CL:0000860,1.02e-39,42;CL:0002057,1.02e-39,42;CL:0000766,7.28e-36,72;CL:0002194,7.67e-35,59;CL:0000576,7.67e-35,59;CL:0000040,7.67e-35,59;CL:0000559,7.67e-35,59;CL:0002009,3.39e-33,61;CL:0000839,1.58e-29,66;CL:0000557,7.31e-29,67;CL:0000763,2.05e-20,108;CL:0000049,2.05e-20,108;CL:0000738,1.01e-16,136;CL:0002087,1.35e-15,115;CL:0002031,1.27e-12,120;CL:0002393,8.67e-12,9;CL:0002397,8.67e-12,9;CL:0000037,5.15e-11,168;CL:0002032,8.30e-11,161;CL:0000837,8.30e-11,161;CL:0000988,9.98e-11,177;CL:0000048,2.07e-10,427;CL:0000723,7.11e-10,433;CL:0000034,3.43e-09,441;CL:1000746,4.74e-08,7;CL:1000612,4.74e-08,7;CL:0002320,1.14e-07,361;CL:0000222,1.75e-07,121;CL:0000134,8.69e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;2.13e-28;42!CL:0000049;4.23e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.48e-15!80;UBERON:0002193!5.50e-15!112;UBERON:0002390!2.55e-14!102;UBERON:0003061!2.55e-14!102;UBERON:0002204!8.35e-14!167;UBERON:0004765!1.37e-13!101;UBERON:0001434!1.37e-13!101;UBERON:0001474!1.39e-13!86;UBERON:0002405!2.43e-11!115;UBERON:0003081!1.53e-10!216;UBERON:0000926!6.59e-08!448;UBERON:0004120!6.59e-08!448;UBERON:0006603!6.59e-08!448;UBERON:0002384!3.35e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;2.26e-08;7!UBERON:0001229;2.26e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.40e-25,76;UBERON:0004765,5.03e-24,90;UBERON:0001474,4.33e-23,82;UBERON:0002204,9.19e-23,167;UBERON:0001434,6.62e-22,100;UBERON:0002390,2.24e-21,98;UBERON:0003061,2.24e-21,98;UBERON:0002193,3.26e-20,108;UBERON:0002405,5.17e-20,93;UBERON:0003081,2.56e-18,203;UBERON:0000926,2.62e-15,315;UBERON:0004120,2.62e-15,315;UBERON:0006603,2.62e-15,315;UBERON:0010532,4.74e-08,7;UBERON:0000074,4.74e-08,7;UBERON:0001229,4.74e-08,7;UBERON:0001230,4.74e-08,7;UBERON:0003220,4.74e-08,7;UBERON:0005749,4.74e-08,7;UBERON:0004199,4.74e-08,7;UBERON:0004209,4.74e-08,7;UBERON:0004198,4.74e-08,7;UBERON:0002384,3.33e-07,371;UBERON:0007503,7.00e-07,78;UBERON:0005103,7.02e-07,8;UBERON:0000083,7.02e-07,8;UBERON:0009201,7.02e-07,8;UBERON:0006553,7.02e-07,8;UBERON:0003074,7.02e-07,8;UBERON:0003060,7.02e-07,8 | |||
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|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,1.34088328328186,0,2.53299878168311,1.89515962028049,1.56711376919903,0.491467873003018,4.18680700783456,0,0.791300934685361,1.23766352960047,1.32558950291166,2.01697543935533,2.41077811209591,0,0,0.984968464614303,1.83600622119828,0.626909442956176,0.286235987131057,0.273748850145768,1.00434111675842,0.687720651731561,0.0821005894499457,0.236132343941038,1.57345710739562,0.767658796194425,0.464448369948228,0,0.6024118375565,0.739508020333575,0,0.284338464974843,0,1.10799081706375,1.20326668482085,3.25516306073778,1.34349284543955,0.32389366601898,1.28787783817093,4.21654892460738,4.53451132426571,1.94067248950253,3.95129362739664,1.6446715520873,1.54853185447552,2.8769239232215,2.30544635876191,3.07426898855161,1.37898272294647,0.645484683583826,0,3.9530891303947,3.82068610080984,1.12361742222542,3.67300670845083,1.28371610830437,3.83602275479425,2.30895910130701,3.78980949481101,2.13112375266347,3.48251086354301,0.56738522469114,2.4912889959823,3.26623264833766,3.12889751052121,2.6062661364614,3.02699751316684,1.10483290796269,1.26584954976354,2.5350634357433,4.46469029926591,2.09658645508376,1.68492946719743,1.35159203557356,0.803627933485401,2.56511469367124,6.16641699317179,2.37463399894024,0,0,0,0.853460445133014,0.400395987036012,0,0.661044872784862,0.954053754535364,0.569212969109448,0.587237189370939,1.14681968437569,0,0.560508562981536,0,0.196709770113833,1.17903228824749,0.822405995998037,0.668745981562712,0,0,0,1.44833593950726,0.294605907474837,0.221533894583621,0,1.66518715643378,0.780356085359269,0.493313713811028,1.10540007114339,0,0,0,0,0.679856056185397,0,0.34362744548263,0.253019692019503,0,0,0,0,0.127986611154418,0,0.473554504088034,1.64225599384209,0.201606743224732,0.267440195783507,0.724122019413995,0,1.34140171940727,0.12786256184353,1.0843174571537,0,1.30361867064741,0,0.486634870302636,1.70162670895322,2.88248216701333,1.49319135678314,0.130979075497713,1.09288586487763,0.741568885568859,0.649094787309367,0.348259474598534,1.19662164466979,0.953962497221368,0,0,0,0,0,0,0.419499436209906,1.10047216776027,0.208994966536811,0.258416759169329,0.35576626268671,0.33472061276467,1.20848795132744,0,0.732186172644509,0.367663080345869,3.24056779152704,0.535798369704479,0,0.225222960966644,0,0,0.732806975721629,1.31780417436063,3.87780264148325,0.436094052142534,0.993943903390637,0,0,0,1.06400514659507,0,0,1.72667283892012,0.622422070799533,0.538842688278752,0.490385709340376,0.151357427644931,0,0,2.80944069147288,0.570471821544449,1.19558944441441,0.587172493218824,0.323745888736263,0.561803226808994,0,1.22834317311768,0.516628905878827,0,1.48360157567134,0,3.59309070908119,1.0100166837244,0.500474079487857,0.831192346452549,0.438977620880838,1.22595118319608,0.150238058906597,0.340296549480063,0.179389635688862,0.427114777637135,0,0.300091096084402,0,0.257640540045629,0.744467425326359,0,0.292311015483596,0.757301322732344,0.0920498986422993,0,0,0.302256294682921,0.847802961552438,0.57978255948989,0.545492241181669,0,0,0.265059536642971,0.580969714347592,0.932949495138334,0.756962552626885,0.72995471815166,0,0.643240938192885,0,0,3.60939740834793,0.946454400318751,0.337169380156203,0,0.55146986366197,0.435758888184812,0.71181185733329,0.539325232640658,0.392442930250692,0.769494313892781,1.4763109092493,1.40241773803446,0.8231480226628,1.47008711385542,0,0,0.590789906681404,0,0,0.514703430895577,0.98775256867763,0,0.402115889646523,0.370353780634118,0,0,2.88662684050547,0,0.352226082707465,0.577465791044295,0.925971025153221,0.190254152234598,0,0,0,0.468008530278475,1.18904929830983,0,0,0.425325291727159,0,0.290633938513962,0.766765358330422,0,0.352193736052904,0.207328115540772,0.432359860250884,0.37872730027914,0,0,0,0,0.308482478109971,0.901029173531752,0,0.672786506072164,0,1.0267360014933,0.387815147273333,0,1.690605505112,0.531876233169741,0,0.514414748524284,0,1.0656887160644,0.57191197463259,0,1.64648067356154,0.325736184293735,0.355391948742546,0.791951872933429,0,0.871533458600294,0.699810938274399,1.2162378064119,2.00902836572851,10.5416969741516,0.479249710983165,0,0,1.15825045334063,1.43833425785268,0,0.112085143993527,0.197030760201927,0,0.385029108839245,0.254094624222463,0,0,0,1.91381625495949,2.24702107184155,8.97484377612075,2.90090859405225,0.24538298343828,1.50051156317903,1.08506009479894,0,2.14114786556594,0.630809660135739,0.117141414992713,0,0,0,1.99267679560631,0.368738337083406,1.21637060255316,0.195801157462741,0,0.413536052245775,4.52999821719095,1.38745825144478,0,1.66435439510497,0,0.248107807818777,0,0.561320188866147,0.384417447767103,0.511707249066704,0.160853921143607,0,0.771048469013278,0.532685175939381,0.164254312027618,0,0.929683027679674,0.241718899183244,1.80455823272956,0.736647911487171,0.114814448164607,0.546273504020151,1.57349297951309,0.902399225814824,0.462092022626489,0.784349769176855,0,0.211103257785751,1.13733384070897,1.70093705276516,1.0795795805107,3.084545053805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| ||
|short_description=p@chr16:84600344..84600356,- | |||
}} | }} |
Latest revision as of 12:54, 25 July 2015
Short description: | p@chr16:84600344..84600356, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:84600344..84600356, - |
Coexpression cluster: | C842_Neutrophils_CD14CD16_CD14_Eosinophils_migratory_Mesenchymal_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.40e-25 | 76 |
skeletal element | 5.03e-24 | 90 |
bone element | 4.33e-23 | 82 |
musculoskeletal system | 9.19e-23 | 167 |
skeletal system | 6.62e-22 | 100 |
hematopoietic system | 2.24e-21 | 98 |
blood island | 2.24e-21 | 98 |
hemolymphoid system | 3.26e-20 | 108 |
immune system | 5.17e-20 | 93 |
lateral plate mesoderm | 2.56e-18 | 203 |
mesoderm | 2.62e-15 | 315 |
mesoderm-derived structure | 2.62e-15 | 315 |
presumptive mesoderm | 2.62e-15 | 315 |
primitive nephron | 4.74e-08 | 7 |
renal glomerulus | 4.74e-08 | 7 |
renal corpuscle | 4.74e-08 | 7 |
glomerular capsule | 4.74e-08 | 7 |
metanephric mesenchyme | 4.74e-08 | 7 |
glomerular tuft | 4.74e-08 | 7 |
S-shaped body | 4.74e-08 | 7 |
renal vesicle | 4.74e-08 | 7 |
comma-shaped body | 4.74e-08 | 7 |
connective tissue | 3.33e-07 | 371 |
epithelial vesicle | 7.00e-07 | 78 |
mesonephric epithelium | 7.02e-07 | 8 |
mesonephric tubule | 7.02e-07 | 8 |
nephric duct | 7.02e-07 | 8 |
renal duct | 7.02e-07 | 8 |
mesonephric duct | 7.02e-07 | 8 |
pronephric duct | 7.02e-07 | 8 |