FFCP PHASE1:Hg19::chr16:84353062..84353074,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:84353062..84353074,+ | |||
|coexpression_cluster_id=C418 | |coexpression_cluster_id=C418 | ||
|description=CAGE_peak_at_chr16:84353062..84353074,+ | |description=CAGE_peak_at_chr16:84353062..84353074,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000148!1.13e-07!10;CL:0000541!1.13e-07!10 | |ontology_enrichment_celltype=CL:0000148!1.13e-07!10;CL:0000541!1.13e-07!10 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.81e-28;29!UBERON:0006242;2.10e-14;1!UBERON:0004874;2.10e-14;1 | |ontology_enrichment_development_v019=UBERON:0008947;1.81e-28;29!UBERON:0006242;2.10e-14;1!UBERON:0004874;2.10e-14;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,2.98e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0001737!7.02e-28!9;UBERON:0007023!1.07e-12!115;UBERON:0001557!3.68e-12!19;UBERON:0008947!1.53e-07!38;UBERON:0003258!1.53e-07!38;UBERON:0003101!5.21e-07!22;UBERON:0000079!5.21e-07!22 | |ontology_enrichment_uberon=UBERON:0001737!7.02e-28!9;UBERON:0007023!1.07e-12!115;UBERON:0001557!3.68e-12!19;UBERON:0008947!1.53e-07!38;UBERON:0003258!1.53e-07!38;UBERON:0003101!5.21e-07!22;UBERON:0000079!5.21e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.41e-93;9!UBERON:0001557;7.41e-93;9!UBERON:0000072;3.92e-21;37!UBERON:0000065;1.89e-17;44!UBERON:0000989;2.10e-14;1!UBERON:0008811;2.10e-14;1!UBERON:0001004;1.90e-09;65 | |ontology_enrichment_uberon_v019=UBERON:0001737;7.41e-93;9!UBERON:0001557;7.41e-93;9!UBERON:0000072;3.92e-21;37!UBERON:0000065;1.89e-17;44!UBERON:0000989;2.10e-14;1!UBERON:0008811;2.10e-14;1!UBERON:0001004;1.90e-09;65 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.85e-93,9;UBERON:0001557,8.50e-44,19;UBERON:0008947,1.34e-21,38;UBERON:0003258,1.34e-21,38;UBERON:0000072,2.47e-17,47;UBERON:0000065,5.39e-15,54;UBERON:0000989,1.41e-14,1;UBERON:0008811,1.41e-14,1;UBERON:0006258,1.41e-14,1;UBERON:0005876,1.41e-14,1;UBERON:0004874,1.41e-14,1;UBERON:0001004,9.72e-11,74;UBERON:0001041,5.14e-09,87;UBERON:0004921,4.15e-08,118;UBERON:0001007,5.65e-08,145;UBERON:0001555,5.65e-08,145;UBERON:0007026,5.65e-08,145;UBERON:0004119,4.07e-07,160;UBERON:0000925,4.07e-07,160;UBERON:0006595,4.07e-07,160 | |||
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| ||
|short_description=p@chr16:84353062..84353074,+ | |short_description=p@chr16:84353062..84353074,+ | ||
}} | }} |
Latest revision as of 12:53, 25 July 2015
Short description: | p@chr16:84353062..84353074, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:84353062..84353074, + |
Coexpression cluster: | C418_normal_Melanocyte_Hep2_cervical_umbilical_osteosarcoma_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 5.85e-93 | 9 |
upper respiratory tract | 8.50e-44 | 19 |
respiratory primordium | 1.34e-21 | 38 |
endoderm of foregut | 1.34e-21 | 38 |
segment of respiratory tract | 2.47e-17 | 47 |
respiratory tract | 5.39e-15 | 54 |
penis | 1.41e-14 | 1 |
intromittent organ | 1.41e-14 | 1 |
lateral plate mesenchyme | 1.41e-14 | 1 |
undifferentiated genital tubercle | 1.41e-14 | 1 |
somatopleure | 1.41e-14 | 1 |
respiratory system | 9.72e-11 | 74 |
foregut | 5.14e-09 | 87 |
subdivision of digestive tract | 4.15e-08 | 118 |
digestive system | 5.65e-08 | 145 |
digestive tract | 5.65e-08 | 145 |
primitive gut | 5.65e-08 | 145 |
endoderm-derived structure | 4.07e-07 | 160 |
endoderm | 4.07e-07 | 160 |
presumptive endoderm | 4.07e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.98e-07 | 106 |