FFCP PHASE1:Hg19::chr16:55539559..55539581,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:55539559..55539581,+ | |||
|coexpression_cluster_id=C351 | |||
|description=CAGE_peak_at_chr16:55539559..55539581,+ | |description=CAGE_peak_at_chr16:55539559..55539581,+ | ||
|id=chr16:55539559..55539581,+ | |id=chr16:55539559..55539581,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.60e-29!180;CL:0000057!4.95e-14!75;CL:0000680!8.67e-13!57;CL:0000056!8.67e-13!57;CL:0000355!8.67e-13!57;CL:0000192!6.32e-12!42;CL:0000514!6.32e-12!42;CL:0000187!1.31e-11!54;CL:0000183!5.70e-11!59;CL:0000393!2.48e-10!60;CL:0000211!2.48e-10!60;CL:0002334!3.74e-09!12;CL:0000222!4.46e-09!119;CL:0000359!1.14e-08!32 | |ontology_enrichment_celltype=CL:0000055!1.60e-29!180;CL:0000057!4.95e-14!75;CL:0000680!8.67e-13!57;CL:0000056!8.67e-13!57;CL:0000355!8.67e-13!57;CL:0000192!6.32e-12!42;CL:0000514!6.32e-12!42;CL:0000187!1.31e-11!54;CL:0000183!5.70e-11!59;CL:0000393!2.48e-10!60;CL:0000211!2.48e-10!60;CL:0002334!3.74e-09!12;CL:0000222!4.46e-09!119;CL:0000359!1.14e-08!32 | ||
|ontology_enrichment_celltype_v019=CL:0002334;3.81e-13;12!CL:0002620;2.62e-10;23!CL:0000134;9.24e-08;55!CL:0000723;9.68e-08;61!CL:0000048;1.81e-07;58!CL:0002539;2.68e-07;10!CL:0000359;7.99e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.37e-18,76;CL:0002334,1.98e-13,12;CL:0000048,2.02e-13,427;CL:0000723,9.34e-13,433;CL:0000034,6.61e-12,441;CL:0002620,3.67e-10,23;CL:0002320,4.60e-08,361;CL:0000680,8.23e-08,58;CL:0000056,8.23e-08,58;CL:0000355,8.23e-08,58;CL:0000134,1.31e-07,354;CL:0000192,2.29e-07,43;CL:0000514,2.29e-07,43;CL:0002539,2.34e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.20e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.02e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.11e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004872!1.32e-15!84;UBERON:0001981!7.49e-14!60;UBERON:0007500!7.49e-14!60;UBERON:0004537!7.49e-14!60;UBERON:0006965!7.49e-14!60;UBERON:0002385!5.77e-13!63;UBERON:0001015!5.77e-13!63;UBERON:0000383!5.77e-13!63;UBERON:0001134!2.01e-12!61;UBERON:0002036!2.01e-12!61;UBERON:0003082!2.01e-12!61;UBERON:0000486!3.32e-12!82;UBERON:0004290!5.95e-12!70;UBERON:0000914!1.52e-11!83;UBERON:0002329!1.52e-11!83;UBERON:0003077!1.52e-11!83;UBERON:0003059!1.52e-11!83;UBERON:0007282!1.52e-11!83;UBERON:0009618!1.52e-11!83;UBERON:0007285!1.52e-11!83;UBERON:0001637!2.42e-11!42;UBERON:0003509!2.42e-11!42;UBERON:0004572!2.42e-11!42;UBERON:0000055!9.65e-11!69;UBERON:0002049!9.71e-11!79;UBERON:0007798!9.71e-11!79;UBERON:0004573!8.35e-10!33;UBERON:0004571!8.35e-10!33;UBERON:0003914!1.74e-09!118;UBERON:0000490!2.00e-09!138;UBERON:0001009!5.74e-09!113;UBERON:0004535!6.12e-09!110;UBERON:0005256!3.04e-08!143;UBERON:0003102!1.05e-07!95;UBERON:0001135!2.19e-07!15;UBERON:0000947!3.86e-07!21;UBERON:0010191!3.86e-07!21;UBERON:0002100!7.31e-07!216;UBERON:0002199!7.78e-07!45;UBERON:0002416!7.78e-07!45;UBERON:0000948!8.13e-07!24;UBERON:0005498!8.13e-07!24;UBERON:0004140!8.13e-07!24;UBERON:0009881!8.13e-07!24;UBERON:0004141!8.13e-07!24;UBERON:0003084!8.13e-07!24;UBERON:0007005!8.13e-07!24;UBERON:0004139!8.13e-07!24;UBERON:0004291!8.13e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.96e-10;33!UBERON:0004571;2.96e-10;33!UBERON:0000947;1.40e-08;21!UBERON:0010191;1.40e-08;21!UBERON:0001637;2.86e-08;42!UBERON:0003509;2.86e-08;42!UBERON:0004572;2.86e-08;42!UBERON:0002199;3.11e-08;46!UBERON:0002416;3.11e-08;46!UBERON:0002384;1.19e-07;198!UBERON:0004237;2.68e-07;10!UBERON:0004695;2.68e-07;10!UBERON:0002111;2.68e-07;10!UBERON:0004178;2.68e-07;10!UBERON:0002097;3.33e-07;41!UBERON:0001013;3.81e-07;14!UBERON:0004457;6.01e-07;9!UBERON:0000042;6.01e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,7.33e-12,46;UBERON:0002416,7.33e-12,46;UBERON:0004573,4.15e-11,33;UBERON:0004571,4.15e-11,33;UBERON:0001637,1.02e-10,42;UBERON:0003509,1.02e-10,42;UBERON:0004572,1.02e-10,42;UBERON:0002097,3.61e-09,41;UBERON:0002384,1.07e-08,371;UBERON:0000947,1.35e-08,21;UBERON:0010191,1.35e-08,21;UBERON:0004872,1.71e-08,83;UBERON:0007524,1.75e-08,73;UBERON:0003102,2.10e-08,99;UBERON:0002329,2.75e-08,71;UBERON:0003059,2.75e-08,71;UBERON:0007282,2.75e-08,71;UBERON:0004290,2.75e-08,71;UBERON:0009618,2.75e-08,71;UBERON:0007500,2.92e-08,59;UBERON:0001981,2.92e-08,59;UBERON:0004537,2.92e-08,59;UBERON:0006965,2.92e-08,59;UBERON:0003077,4.74e-08,72;UBERON:0007285,4.74e-08,72;UBERON:0001134,1.78e-07,62;UBERON:0002036,1.78e-07,62;UBERON:0003082,1.78e-07,62;UBERON:0000926,1.92e-07,315;UBERON:0004120,1.92e-07,315;UBERON:0006603,1.92e-07,315;UBERON:0004237,2.34e-07,10;UBERON:0004695,2.34e-07,10;UBERON:0002111,2.34e-07,10;UBERON:0004178,2.34e-07,10;UBERON:0007503,2.39e-07,78;UBERON:0001013,2.58e-07,14;UBERON:0000486,2.62e-07,83;UBERON:0002385,5.22e-07,64;UBERON:0001015,5.22e-07,64;UBERON:0000383,5.22e-07,64 | |||
|phase1_expression=4.72363786103447,5.78071414505655,4.65149533516705,0,12.9618717383913,2.61701557230111,0,13.2661173419635,16.19350894839,0.245733936501509,0,0,0.263766978228454,0.495065411840187,0.994192127183747,10.0848771967766,10.8485015044316,5.11217063271161,7.3189919818576,0.61560529038394,0.204000691244253,0.313454721478088,0,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,2.1686349143074,0,3.62116297402059,12.7245751528176,7.78615792484217,0,0,0.43917392846563,0.72038491523742,0,0,0,0,0,0,0,0,0.39752481473341,0,0.694281003215189,0,1.25849830862972,1.10047216776027,0.626984899610432,0,0,0,0.805658634218294,0.760272105718513,1.46437234528902,0,1.62028389576352,0.446498641420399,0.44905874525234,0.112611480483322,0,0,0.366403487860815,0,0,0,2.48485975847659,6.20489507156441,2.38336525463794,17.4970338656776,6.38403087957043,0,1.06748995729705,4.19334832309172,0.933633106199299,0.404132016209064,0,0.756787138224657,0,0,3.43376084513353,0,2.09228152772521,0,0,0,0.408308342509787,0,1.03325781175765,16.6320400019487,6.92347401979959,0,0,0.673344455816265,0,0.554128230968366,0,1.5324389789951,3.90618953157152,0.453728732640084,2.15267562826634,1.92201649936711,1.48352330811693,1.80054657650641,1.75189299705346,1.03056216018252,1.30281799432113,4.21940830603166,2.43592512902997,2.01947019395292,1.65689817556139,3.07127507955743,3.55009592516614,1.10827308050404,1.18692414617341,0.193260853163297,0,0,0,0,0.348581828608555,0.207322110030741,0.252320850875628,0,1.56449532329816,10.935095949279,0,2.3218396401599,2.16563844500876,0,0,0,0,0,0,0,0,0,0.738155454624648,2.80483547606892,0,1.47008711385542,0,0,0,0,0,0.343135620597051,0.219500570817251,0,0.100528972411631,0.0925884451585296,0.651616610620649,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0.462985512576611,0,0,0,0,0.234004265139238,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0.144119953416961,0.25248486685276,0.190493682876507,0.381988425558278,0,1.71072446022705,0.925447434329912,0.300343057843917,0.285826432630578,0,0,0.1466765716419,3.23179289394444,0,0.845302752556,7.44626726437637,6.24044621468197,0.257207374262142,0,0,1.14382394926518,3.7983512377401,0.823240336780769,0.65147236858747,1.06617584622764,0.791951872933429,2.1100756394171,1.74306691720059,0,1.2162378064119,0,0,0.239624855491583,0,0,1.59259437334337,2.26023954805422,1.43248770591916,0,0,0,0,0.76228387266739,1.30139853857622,0,0.167516265334349,0,0,0,0,0.24538298343828,1.50051156317903,0,1.03985430765404,2.85486382075459,1.89242898040722,0.468565659970853,0.902838299183157,13.6444502433591,12.4167685551006,1.32845119707087,0.368738337083406,4.17041349446798,1.76221041716467,2.05886054286514,0,0,0,0,0,0.30239029332968,7.69134204238208,2.30192959932094,8.70046292742528,5.12556597022804,2.55853624533352,5.95159508231348,4.45254199334973,2.46735510084249,6.39222211127257,1.97105174433142,5.19254429183621,2.78904908303902,0,3.20810352485256,0.368323955743585,2.06666006696292,2.54927635209404,11.1455752715511,0,0.0770153371044148,0,0,0.422206515571503,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,1.75169719801128,0.366277859273374,0,0,0.650060246036521,0,11.3104740401783,0.154048617114644,0,0,1.18162269355101,0.580066775656914,0.170453254832202,3.20515328328254,0.330569830721956,0,0,0,3.253918845081,20.7776148908222,1.3940745403212,1.84820148105653,0,0.869932992075073,7.22764454505288,0.143124886741991,0,0.949138274156178,0.190630193923825,0.767693373934002,0.855877976067841,0.318203247925937,0,2.15846949099978,1.09814811894422,0.824686816419805,1.2130948894399,3.17020642346017,0.842516912477962,0.48763373908959,4.14312932373184,4.22600587027022,2.18399858252777,9.33275850894504,1.13008116620243,0,8.62470667813585,1.75380354101505,0.578775534266688,1.31178950409327,0.405820753925408,0.92947049429925,0,0.286822704408103,0.589494246078727,1.78335525740625,0.709522128141196,10.5553817648832,18.4405140057545,0.75894634753143,0.349934720244983,0,0.670302275535787,0,3.20088922641049,0.86101074534246,0,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561594356226918,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,6.15334352941955,0,0,0,0,0,0,0,0,1.44701316529778,0,0,1.19548792950642,0.552567831062295,0,0.613612095012929,0,1.24415835064723,0,0,0,0.887790650732402,0,1.11136990144637,0,0,0,0,0,6.52499617891314,0.1137934482855,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,2.5393585306253,2.62066728448103,0,3.59030577639089,0,0,3.38911095586891,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0.216388639742091,0.995261931078505,0.707660516026713,1.22206028986725,0,0,0,0,1.60515529459758,0,0,0,0,0.394584402849391,0,0,1.51647791108371,0,0,0,0.330991955875499,0,0,0,0.832048038078832,0,0,0,6.98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| ||
|short_description=p@chr16:55539559..55539581,+ | |short_description=p@chr16:55539559..55539581,+ | ||
}} | }} |
Latest revision as of 09:53, 25 July 2015
Short description: | p@chr16:55539559..55539581, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:55539559..55539581, + |
Coexpression cluster: | C351_Fibroblast_Smooth_mesenchymal_Adipocyte_tenocyte_Synoviocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.37e-18 | 76 |
preadipocyte | 1.98e-13 | 12 |
multi fate stem cell | 2.02e-13 | 427 |
somatic stem cell | 9.34e-13 | 433 |
stem cell | 6.61e-12 | 441 |
skin fibroblast | 3.67e-10 | 23 |
connective tissue cell | 4.60e-08 | 361 |
muscle precursor cell | 8.23e-08 | 58 |
myoblast | 8.23e-08 | 58 |
multi-potent skeletal muscle stem cell | 8.23e-08 | 58 |
mesenchymal cell | 1.31e-07 | 354 |
smooth muscle cell | 2.29e-07 | 43 |
smooth muscle myoblast | 2.29e-07 | 43 |
aortic smooth muscle cell | 2.34e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.11e-08 | 14 |