FFCP PHASE1:Hg19::chr16:55539265..55539280,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:55539265..55539280,+ | |||
|coexpression_cluster_id=C351 | |||
|description=CAGE_peak_at_chr16:55539265..55539280,+ | |description=CAGE_peak_at_chr16:55539265..55539280,+ | ||
|id=chr16:55539265..55539280,+ | |id=chr16:55539265..55539280,+ | ||
|ontology_enrichment_celltype=CL:0000055!8.46e-37!180;CL:0000057!2.88e-19!75;CL:0000680!2.09e-13!57;CL:0000056!2.09e-13!57;CL:0000355!2.09e-13!57;CL:0000192!3.41e-13!42;CL:0000514!3.41e-13!42;CL:0000187!3.89e-12!54;CL:0000183!1.94e-11!59;CL:0002371!1.60e-10!591;CL:0000393!1.84e-10!60;CL:0000211!1.84e-10!60;CL:0000144!1.97e-10!625;CL:0000222!6.18e-10!119;CL:0000359!4.33e-09!32;CL:0002620!5.75e-08!23;CL:0002334!7.87e-08!12;CL:0000048!2.17e-07!430;CL:0000034!5.12e-07!444;CL:0000723!8.18e-07!436 | |ontology_enrichment_celltype=CL:0000055!8.46e-37!180;CL:0000057!2.88e-19!75;CL:0000680!2.09e-13!57;CL:0000056!2.09e-13!57;CL:0000355!2.09e-13!57;CL:0000192!3.41e-13!42;CL:0000514!3.41e-13!42;CL:0000187!3.89e-12!54;CL:0000183!1.94e-11!59;CL:0002371!1.60e-10!591;CL:0000393!1.84e-10!60;CL:0000211!1.84e-10!60;CL:0000144!1.97e-10!625;CL:0000222!6.18e-10!119;CL:0000359!4.33e-09!32;CL:0002620!5.75e-08!23;CL:0002334!7.87e-08!12;CL:0000048!2.17e-07!430;CL:0000034!5.12e-07!444;CL:0000723!8.18e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0002334;5.01e-11;12!CL:0000192;2.04e-10;43!CL:0000134;3.73e-09;55!CL:0000359;7.63e-09;32!CL:0002620;8.30e-09;23!CL:0000048;1.30e-08;58!CL:0000723;1.88e-08;61!CL:0002320;4.27e-08;188!CL:0002539;5.15e-08;10!CL:0000057;1.39e-07;73!CL:0000499;6.40e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.69e-20,76;CL:0000048,1.30e-16,427;CL:0000723,8.56e-16,433;CL:0000034,3.81e-15,441;CL:0000192,4.45e-14,43;CL:0000514,4.45e-14,43;CL:0000680,8.55e-13,58;CL:0000056,8.55e-13,58;CL:0000355,8.55e-13,58;CL:0000187,3.43e-11,55;CL:0002334,4.95e-11,12;CL:0000393,3.98e-09,61;CL:0000211,3.98e-09,61;CL:0000359,6.50e-09,32;CL:0002620,7.88e-09,23;CL:0002320,1.34e-08,361;CL:0000134,3.83e-08,354;CL:0002539,4.31e-08,10;CL:0000136,7.12e-08,15;CL:0000219,1.84e-07,386;CL:0000499,5.36e-07,28;CL:0000222,6.10e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;2.04e-10;43 | |||
|ontology_enrichment_disease=DOID:2394!5.87e-08!14 | |ontology_enrichment_disease=DOID:2394!5.87e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;2.80e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.44e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0000486!8.73e-14!82;UBERON:0004290!1.29e-13!70;UBERON:0000914!1.64e-13!83;UBERON:0002329!1.64e-13!83;UBERON:0003077!1.64e-13!83;UBERON:0003059!1.64e-13!83;UBERON:0007282!1.64e-13!83;UBERON:0009618!1.64e-13!83;UBERON:0007285!1.64e-13!83;UBERON:0001637!4.67e-13!42;UBERON:0003509!4.67e-13!42;UBERON:0004572!4.67e-13!42;UBERON:0002385!5.30e-13!63;UBERON:0001015!5.30e-13!63;UBERON:0000383!5.30e-13!63;UBERON:0001134!7.66e-13!61;UBERON:0002036!7.66e-13!61;UBERON:0003082!7.66e-13!61;UBERON:0004872!8.09e-13!84;UBERON:0001981!1.60e-11!60;UBERON:0007500!1.60e-11!60;UBERON:0004537!1.60e-11!60;UBERON:0006965!1.60e-11!60;UBERON:0002049!3.54e-11!79;UBERON:0007798!3.54e-11!79;UBERON:0004573!8.32e-11!33;UBERON:0004571!8.32e-11!33;UBERON:0005256!8.97e-11!143;UBERON:0000055!9.94e-10!69;UBERON:0000947!8.57e-09!21;UBERON:0010191!8.57e-09!21;UBERON:0002199!8.77e-09!45;UBERON:0002416!8.77e-09!45;UBERON:0003914!9.08e-09!118;UBERON:0000490!1.55e-08!138;UBERON:0004535!2.24e-08!110;UBERON:0001009!2.85e-08!113;UBERON:0003102!3.81e-08!95;UBERON:0002100!6.05e-08!216;UBERON:0000468!2.39e-07!659;UBERON:0001135!5.44e-07!15 | |ontology_enrichment_uberon=UBERON:0000486!8.73e-14!82;UBERON:0004290!1.29e-13!70;UBERON:0000914!1.64e-13!83;UBERON:0002329!1.64e-13!83;UBERON:0003077!1.64e-13!83;UBERON:0003059!1.64e-13!83;UBERON:0007282!1.64e-13!83;UBERON:0009618!1.64e-13!83;UBERON:0007285!1.64e-13!83;UBERON:0001637!4.67e-13!42;UBERON:0003509!4.67e-13!42;UBERON:0004572!4.67e-13!42;UBERON:0002385!5.30e-13!63;UBERON:0001015!5.30e-13!63;UBERON:0000383!5.30e-13!63;UBERON:0001134!7.66e-13!61;UBERON:0002036!7.66e-13!61;UBERON:0003082!7.66e-13!61;UBERON:0004872!8.09e-13!84;UBERON:0001981!1.60e-11!60;UBERON:0007500!1.60e-11!60;UBERON:0004537!1.60e-11!60;UBERON:0006965!1.60e-11!60;UBERON:0002049!3.54e-11!79;UBERON:0007798!3.54e-11!79;UBERON:0004573!8.32e-11!33;UBERON:0004571!8.32e-11!33;UBERON:0005256!8.97e-11!143;UBERON:0000055!9.94e-10!69;UBERON:0000947!8.57e-09!21;UBERON:0010191!8.57e-09!21;UBERON:0002199!8.77e-09!45;UBERON:0002416!8.77e-09!45;UBERON:0003914!9.08e-09!118;UBERON:0000490!1.55e-08!138;UBERON:0004535!2.24e-08!110;UBERON:0001009!2.85e-08!113;UBERON:0003102!3.81e-08!95;UBERON:0002100!6.05e-08!216;UBERON:0000468!2.39e-07!659;UBERON:0001135!5.44e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.36e-11;33!UBERON:0004571;1.36e-11;33!UBERON:0000947;1.03e-10;21!UBERON:0010191;1.03e-10;21!UBERON:0001637;1.10e-10;42!UBERON:0003509;1.10e-10;42!UBERON:0004572;1.10e-10;42!UBERON:0004457;9.99e-09;9!UBERON:0000042;9.99e-09;9!UBERON:0004237;5.15e-08;10!UBERON:0004695;5.15e-08;10!UBERON:0002111;5.15e-08;10!UBERON:0004178;5.15e-08;10!UBERON:0001135;6.23e-08;15!UBERON:0003688;6.44e-08;6!UBERON:0002358;6.44e-08;6!UBERON:0003684;6.44e-08;6!UBERON:0001178;6.44e-08;6!UBERON:0002384;9.75e-08;198!UBERON:0002199;1.23e-07;46!UBERON:0002416;1.23e-07;46 | |||
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| ||
|short_description=p@chr16:55539265..55539280,+ | |short_description=p@chr16:55539265..55539280,+ | ||
}} | }} |
Latest revision as of 09:53, 25 July 2015
Short description: | p@chr16:55539265..55539280, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:55539265..55539280, + |
Coexpression cluster: | C351_Fibroblast_Smooth_mesenchymal_Adipocyte_tenocyte_Synoviocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.69e-20 | 76 |
multi fate stem cell | 1.30e-16 | 427 |
somatic stem cell | 8.56e-16 | 433 |
stem cell | 3.81e-15 | 441 |
smooth muscle cell | 4.45e-14 | 43 |
smooth muscle myoblast | 4.45e-14 | 43 |
muscle precursor cell | 8.55e-13 | 58 |
myoblast | 8.55e-13 | 58 |
multi-potent skeletal muscle stem cell | 8.55e-13 | 58 |
muscle cell | 3.43e-11 | 55 |
preadipocyte | 4.95e-11 | 12 |
electrically responsive cell | 3.98e-09 | 61 |
electrically active cell | 3.98e-09 | 61 |
vascular associated smooth muscle cell | 6.50e-09 | 32 |
skin fibroblast | 7.88e-09 | 23 |
connective tissue cell | 1.34e-08 | 361 |
mesenchymal cell | 3.83e-08 | 354 |
aortic smooth muscle cell | 4.31e-08 | 10 |
fat cell | 7.12e-08 | 15 |
motile cell | 1.84e-07 | 386 |
stromal cell | 5.36e-07 | 28 |
mesodermal cell | 6.10e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.44e-11 | 14 |