FFCP PHASE1:Hg19::chr16:55532232..55532249,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:55532232..55532249,+ | |||
|coexpression_cluster_id=C351 | |||
|description=CAGE_peak_at_chr16:55532232..55532249,+ | |description=CAGE_peak_at_chr16:55532232..55532249,+ | ||
|id=chr16:55532232..55532249,+ | |id=chr16:55532232..55532249,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.39e-40!180;CL:0000680!1.32e-20!57;CL:0000056!1.32e-20!57;CL:0000355!1.32e-20!57;CL:0000187!4.85e-19!54;CL:0000183!6.05e-19!59;CL:0000057!2.10e-18!75;CL:0000393!1.43e-17!60;CL:0000211!1.43e-17!60;CL:0000192!2.32e-16!42;CL:0000514!2.32e-16!42;CL:0000359!7.13e-13!32;CL:0000222!8.10e-12!119;CL:0002371!3.48e-11!591;CL:0000048!1.33e-10!430;CL:0000723!9.02e-10!436;CL:0000144!9.13e-10!625;CL:0002334!3.34e-09!12;CL:0000034!3.51e-09!444;CL:0000220!4.25e-08!246;CL:0002321!4.90e-08!248;CL:0002620!5.13e-08!23;CL:0002494!6.86e-08!16;CL:0000499!9.49e-07!27 | |ontology_enrichment_celltype=CL:0000055!4.39e-40!180;CL:0000680!1.32e-20!57;CL:0000056!1.32e-20!57;CL:0000355!1.32e-20!57;CL:0000187!4.85e-19!54;CL:0000183!6.05e-19!59;CL:0000057!2.10e-18!75;CL:0000393!1.43e-17!60;CL:0000211!1.43e-17!60;CL:0000192!2.32e-16!42;CL:0000514!2.32e-16!42;CL:0000359!7.13e-13!32;CL:0000222!8.10e-12!119;CL:0002371!3.48e-11!591;CL:0000048!1.33e-10!430;CL:0000723!9.02e-10!436;CL:0000144!9.13e-10!625;CL:0002334!3.34e-09!12;CL:0000034!3.51e-09!444;CL:0000220!4.25e-08!246;CL:0002321!4.90e-08!248;CL:0002620!5.13e-08!23;CL:0002494!6.86e-08!16;CL:0000499!9.49e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000359;8.37e-13;32!CL:0002334;2.62e-12;12!CL:0000192;6.60e-12;43!CL:0002539;2.89e-10;10!CL:0000134;1.48e-09;55!CL:0000048;4.51e-09;58!CL:0000723;1.84e-08;61!CL:0002620;5.26e-08;23!CL:0002595;2.91e-07;5!CL:0002320;7.44e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.69e-19,427;CL:0000723,9.74e-19,433;CL:0000034,9.26e-18,441;CL:0000057,4.07e-17,76;CL:0000192,3.65e-16,43;CL:0000514,3.65e-16,43;CL:0000680,9.69e-16,58;CL:0000056,9.69e-16,58;CL:0000355,9.69e-16,58;CL:0000187,1.02e-13,55;CL:0000359,4.44e-13,32;CL:0002334,3.46e-12,12;CL:0000393,1.77e-11,61;CL:0000211,1.77e-11,61;CL:0002539,2.87e-10,10;CL:0002320,5.13e-09,361;CL:0000134,9.64e-09,354;CL:0002620,5.15e-08,23;CL:0000136,7.16e-08,15;CL:0002595,2.59e-07,5;CL:0000222,4.44e-07,121;CL:0000219,9.28e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000514;6.60e-12;43!CL:0000355;6.95e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!2.70e-07!14 | |ontology_enrichment_disease=DOID:2394!2.70e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;5.29e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.28e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.09e-20!83;UBERON:0002329!2.09e-20!83;UBERON:0003077!2.09e-20!83;UBERON:0003059!2.09e-20!83;UBERON:0007282!2.09e-20!83;UBERON:0009618!2.09e-20!83;UBERON:0007285!2.09e-20!83;UBERON:0004290!2.47e-20!70;UBERON:0004872!3.40e-20!84;UBERON:0002385!4.74e-20!63;UBERON:0001015!4.74e-20!63;UBERON:0000383!4.74e-20!63;UBERON:0001134!1.39e-19!61;UBERON:0002036!1.39e-19!61;UBERON:0003082!1.39e-19!61;UBERON:0000486!2.44e-19!82;UBERON:0001637!1.58e-15!42;UBERON:0003509!1.58e-15!42;UBERON:0004572!1.58e-15!42;UBERON:0001981!8.33e-15!60;UBERON:0007500!8.33e-15!60;UBERON:0004537!8.33e-15!60;UBERON:0006965!8.33e-15!60;UBERON:0004573!1.71e-13!33;UBERON:0004571!1.71e-13!33;UBERON:0005256!2.10e-13!143;UBERON:0002049!1.10e-12!79;UBERON:0007798!1.10e-12!79;UBERON:0000055!2.10e-12!69;UBERON:0004535!2.25e-12!110;UBERON:0003914!2.77e-12!118;UBERON:0001009!5.94e-12!113;UBERON:0000490!5.65e-11!138;UBERON:0002100!1.42e-09!216;UBERON:0001135!1.76e-08!15;UBERON:0000947!2.20e-08!21;UBERON:0010191!2.20e-08!21;UBERON:0000948!2.42e-08!24;UBERON:0005498!2.42e-08!24;UBERON:0004140!2.42e-08!24;UBERON:0009881!2.42e-08!24;UBERON:0004141!2.42e-08!24;UBERON:0003084!2.42e-08!24;UBERON:0007005!2.42e-08!24;UBERON:0004139!2.42e-08!24;UBERON:0004291!2.42e-08!24;UBERON:0007100!2.35e-07!27;UBERON:0002199!3.36e-07!45;UBERON:0002416!3.36e-07!45 | |ontology_enrichment_uberon=UBERON:0000914!2.09e-20!83;UBERON:0002329!2.09e-20!83;UBERON:0003077!2.09e-20!83;UBERON:0003059!2.09e-20!83;UBERON:0007282!2.09e-20!83;UBERON:0009618!2.09e-20!83;UBERON:0007285!2.09e-20!83;UBERON:0004290!2.47e-20!70;UBERON:0004872!3.40e-20!84;UBERON:0002385!4.74e-20!63;UBERON:0001015!4.74e-20!63;UBERON:0000383!4.74e-20!63;UBERON:0001134!1.39e-19!61;UBERON:0002036!1.39e-19!61;UBERON:0003082!1.39e-19!61;UBERON:0000486!2.44e-19!82;UBERON:0001637!1.58e-15!42;UBERON:0003509!1.58e-15!42;UBERON:0004572!1.58e-15!42;UBERON:0001981!8.33e-15!60;UBERON:0007500!8.33e-15!60;UBERON:0004537!8.33e-15!60;UBERON:0006965!8.33e-15!60;UBERON:0004573!1.71e-13!33;UBERON:0004571!1.71e-13!33;UBERON:0005256!2.10e-13!143;UBERON:0002049!1.10e-12!79;UBERON:0007798!1.10e-12!79;UBERON:0000055!2.10e-12!69;UBERON:0004535!2.25e-12!110;UBERON:0003914!2.77e-12!118;UBERON:0001009!5.94e-12!113;UBERON:0000490!5.65e-11!138;UBERON:0002100!1.42e-09!216;UBERON:0001135!1.76e-08!15;UBERON:0000947!2.20e-08!21;UBERON:0010191!2.20e-08!21;UBERON:0000948!2.42e-08!24;UBERON:0005498!2.42e-08!24;UBERON:0004140!2.42e-08!24;UBERON:0009881!2.42e-08!24;UBERON:0004141!2.42e-08!24;UBERON:0003084!2.42e-08!24;UBERON:0007005!2.42e-08!24;UBERON:0004139!2.42e-08!24;UBERON:0004291!2.42e-08!24;UBERON:0007100!2.35e-07!27;UBERON:0002199!3.36e-07!45;UBERON:0002416!3.36e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.39e-17;33!UBERON:0004571;5.39e-17;33!UBERON:0001637;8.62e-13;42!UBERON:0003509;8.62e-13;42!UBERON:0004572;8.62e-13;42!UBERON:0000947;1.36e-12;21!UBERON:0010191;1.36e-12;21!UBERON:0001135;3.46e-12;15!UBERON:0004237;2.89e-10;10!UBERON:0004695;2.89e-10;10!UBERON:0002111;2.89e-10;10!UBERON:0004178;2.89e-10;10!UBERON:0004457;1.04e-09;9!UBERON:0000042;1.04e-09;9!UBERON:0003688;1.95e-08;6!UBERON:0002358;1.95e-08;6!UBERON:0003684;1.95e-08;6!UBERON:0001178;1.95e-08;6!UBERON:0002199;2.54e-07;46!UBERON:0002416;2.54e-07;46!UBERON:0002385;2.85e-07;31!UBERON:0001015;2.85e-07;31!UBERON:0000383;2.85e-07;31!UBERON:0003834;2.91e-07;5!UBERON:0001533;2.91e-07;5!UBERON:0002384;3.26e-07;198 | |||
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| ||
|short_description=p@chr16:55532232..55532249,+ | |short_description=p@chr16:55532232..55532249,+ | ||
}} | }} |
Latest revision as of 09:52, 25 July 2015
Short description: | p@chr16:55532232..55532249, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:55532232..55532249, + |
Coexpression cluster: | C351_Fibroblast_Smooth_mesenchymal_Adipocyte_tenocyte_Synoviocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.69e-19 | 427 |
somatic stem cell | 9.74e-19 | 433 |
stem cell | 9.26e-18 | 441 |
fibroblast | 4.07e-17 | 76 |
smooth muscle cell | 3.65e-16 | 43 |
smooth muscle myoblast | 3.65e-16 | 43 |
muscle precursor cell | 9.69e-16 | 58 |
myoblast | 9.69e-16 | 58 |
multi-potent skeletal muscle stem cell | 9.69e-16 | 58 |
muscle cell | 1.02e-13 | 55 |
vascular associated smooth muscle cell | 4.44e-13 | 32 |
preadipocyte | 3.46e-12 | 12 |
electrically responsive cell | 1.77e-11 | 61 |
electrically active cell | 1.77e-11 | 61 |
aortic smooth muscle cell | 2.87e-10 | 10 |
connective tissue cell | 5.13e-09 | 361 |
mesenchymal cell | 9.64e-09 | 354 |
skin fibroblast | 5.15e-08 | 23 |
fat cell | 7.16e-08 | 15 |
smooth muscle cell of the subclavian artery | 2.59e-07 | 5 |
mesodermal cell | 4.44e-07 | 121 |
motile cell | 9.28e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.28e-10 | 14 |