FFCP PHASE1:Hg19::chr16:52417646..52417654,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:52417646..52417654,- | |||
|coexpression_cluster_id=C1197 | |||
|description=CAGE_peak_at_chr16:52417646..52417654,- | |||
|id=chr16:52417646..52417654,- | |||
|ontology_enrichment_celltype=CL:0002195!4.37e-22!2;CL:0002571!4.37e-22!2;CL:0000181!1.48e-08!12;CL:0000417!1.48e-08!12;CL:0000668!1.48e-08!12;CL:0000414!1.48e-08!12;CL:0000412!1.48e-08!12;CL:0000182!1.48e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.98e-34;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.98e-34,12;CL:0000223,4.33e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.16e-10;11!UBERON:0009497;5.28e-09;13!CL:0000223;3.43e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!9.70e-20!19;UBERON:0006925!9.70e-20!19;UBERON:0008836!9.70e-20!19;UBERON:0008835!5.29e-17!22;UBERON:0003894!5.29e-17!22;UBERON:0009854!3.00e-16!23;UBERON:0007499!6.39e-15!25;UBERON:0009497!6.39e-15!25;UBERON:0000015!6.39e-15!25;UBERON:0002423!6.39e-15!25;UBERON:0006235!6.39e-15!25;UBERON:0004161!6.39e-15!25;UBERON:0005057!2.47e-14!26;UBERON:0009856!2.47e-14!26;UBERON:0000996!3.27e-12!1;UBERON:0002365!5.84e-12!31;UBERON:0002330!5.84e-12!31;UBERON:0005172!1.93e-11!55;UBERON:0005173!1.93e-11!55;UBERON:0002368!1.51e-10!35;UBERON:0005177!2.46e-10!107;UBERON:0002417!3.18e-10!61;UBERON:0000916!3.18e-10!61;UBERON:0004921!6.82e-10!129;UBERON:0004185!6.82e-10!129;UBERON:0003929!6.17e-09!54;UBERON:0000466!1.72e-08!126;UBERON:0000949!4.14e-08!45;UBERON:0009569!5.74e-08!113;UBERON:0001007!6.10e-08!155;UBERON:0001555!6.10e-08!155;UBERON:0007026!6.10e-08!155;UBERON:0002100!1.85e-07!216;UBERON:0005911!2.48e-07!82;UBERON:0004119!3.89e-07!169;UBERON:0000925!3.89e-07!169;UBERON:0006595!3.89e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.37e-22;19!UBERON:0006925;5.37e-22;19!UBERON:0002423;4.64e-17;25!UBERON:0002365;1.90e-14;31!UBERON:0002330;1.90e-14;31!UBERON:0002368;1.84e-13;33!UBERON:0005172;1.47e-07;52!UBERON:0005173;1.47e-07;52!UBERON:0002530;7.96e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.37e-22,19;UBERON:0006925,5.37e-22,19;UBERON:0008836,5.37e-22,19;UBERON:0008835,3.41e-19,22;UBERON:0003894,3.41e-19,22;UBERON:0009854,2.02e-18,23;UBERON:0007499,4.64e-17,25;UBERON:0009497,4.64e-17,25;UBERON:0000015,4.64e-17,25;UBERON:0002423,4.64e-17,25;UBERON:0006235,4.64e-17,25;UBERON:0004161,4.64e-17,25;UBERON:0009856,1.86e-16,26;UBERON:0002365,5.04e-14,31;UBERON:0002330,5.04e-14,31;UBERON:0002368,1.42e-12,35;UBERON:0000949,4.55e-10,45;UBERON:0003929,1.34e-08,54;UBERON:0005172,1.34e-08,54;UBERON:0005173,1.34e-08,54;UBERON:0002530,5.66e-08,59;UBERON:0002417,7.34e-08,60;UBERON:0000916,7.34e-08,60 | |||
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|short_description=p@chr16:52417646..52417654,- | |||
}} | }} |
Latest revision as of 09:43, 25 July 2015
Short description: | p@chr16:52417646..52417654, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:52417646..52417654, - |
Coexpression cluster: | C1197_hepatoma_Hepatocyte_liver_argyrophil_hepatocellular_gastrointestinal_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.98e-34 | 12 |
endodermal cell | 4.33e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 5.37e-22 | 19 |
digestive gland | 5.37e-22 | 19 |
liver bud | 5.37e-22 | 19 |
hepatic diverticulum | 3.41e-19 | 22 |
liver primordium | 3.41e-19 | 22 |
digestive tract diverticulum | 2.02e-18 | 23 |
epithelial sac | 4.64e-17 | 25 |
epithelium of foregut-midgut junction | 4.64e-17 | 25 |
anatomical boundary | 4.64e-17 | 25 |
hepatobiliary system | 4.64e-17 | 25 |
foregut-midgut junction | 4.64e-17 | 25 |
septum transversum | 4.64e-17 | 25 |
sac | 1.86e-16 | 26 |
exocrine gland | 5.04e-14 | 31 |
exocrine system | 5.04e-14 | 31 |
endocrine gland | 1.42e-12 | 35 |
endocrine system | 4.55e-10 | 45 |
gut epithelium | 1.34e-08 | 54 |
abdomen element | 1.34e-08 | 54 |
abdominal segment element | 1.34e-08 | 54 |
gland | 5.66e-08 | 59 |
abdominal segment of trunk | 7.34e-08 | 60 |
abdomen | 7.34e-08 | 60 |