FFCP PHASE1:Hg19::chr16:3109599..3109646,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:3109599..3109646,+ | |||
|coexpression_cluster_id=C107 | |||
|description=CAGE_peak_at_chr16:3109599..3109646,+ | |||
|id=chr16:3109599..3109646,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.90e-10!76;CL:0002057!2.18e-09!42;CL:0000860!7.01e-09!45;CL:0000763!3.08e-08!112;CL:0000049!3.08e-08!112;CL:0000839!2.57e-07!70;CL:0000557!4.38e-07!71;CL:0002194!5.81e-07!63;CL:0000576!5.81e-07!63;CL:0000040!5.81e-07!63;CL:0000559!5.81e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000775;6.06e-21;3!CL:0000860;5.19e-17;33!CL:0002057;5.19e-17;33!CL:0000081;8.24e-15;11!CL:0000094;1.60e-13;8!CL:0000473;7.15e-12;39!CL:0000234;7.15e-12;39!CL:0000576;2.24e-09;48!CL:0002581;1.22e-07;1!CL:0000766;2.52e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,5.31e-21,3;CL:0000766,4.60e-15,72;CL:0000081,7.79e-15,11;CL:0000860,4.05e-14,42;CL:0002057,4.05e-14,42;CL:0000094,1.43e-13,8;CL:0000473,3.91e-12,48;CL:0000234,3.91e-12,48;CL:0000763,1.19e-10,108;CL:0000049,1.19e-10,108;CL:0002194,2.33e-09,59;CL:0000576,2.33e-09,59;CL:0000040,2.33e-09,59;CL:0000559,2.33e-09,59;CL:0002009,5.30e-09,61;CL:0000839,3.35e-08,66;CL:0000557,4.68e-08,67;CL:0000738,7.18e-08,136;CL:0002581,7.97e-08,1 | |||
|ontology_enrichment_development_v019=CL:0002057;5.79e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.87e-09!102;UBERON:0003061!4.87e-09!102;UBERON:0002193!9.83e-09!112;UBERON:0000178!1.88e-07!15;UBERON:0000179!1.88e-07!15;UBERON:0000463!1.88e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;6.52e-08;1!UBERON:0005208;6.52e-08;1!UBERON:0004145;6.52e-08;1!UBERON:0005946;6.52e-08;1!UBERON:0005965;6.52e-08;1!UBERON:0002078;6.52e-08;1!UBERON:0000178;5.42e-07;15!UBERON:0000179;5.42e-07;15!UBERON:0000463;5.42e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.27e-10,98;UBERON:0003061,3.27e-10,98;UBERON:0002193,5.02e-09,108;UBERON:0002134,6.97e-08,1;UBERON:0005208,6.97e-08,1;UBERON:0005946,6.97e-08,1;UBERON:0005965,6.97e-08,1;UBERON:0002078,6.97e-08,1;UBERON:0000178,5.87e-07,15;UBERON:0000179,5.87e-07,15;UBERON:0000463,5.87e-07,15;UBERON:0002371,6.47e-07,76;UBERON:0003081,9.30e-07,203 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,1.0007329835313,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0.672325146451775,0,0.730310090387373,0.487932798790507,0.123121058076788,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0,0,0,0.32389366601898,0,0.145398238779565,0.377875943688809,0.242584061187816,0.232429036905685,0.822335776043652,0.929119112685311,35.6738566479467,28.1776777182011,2.36482229888585,0,0,0,0.188242339542605,0,0,0.306083892370903,0.962787081228281,0,19.791078011203,11.9678194572979,2.98357325372886,0.870627715885752,1.13477044938228,0.622822248995575,18.3411525637423,20.3378338183879,1.52032191293582,0,0.736555271975129,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0.167186495390678,0,0,0,1.11410456885174,0,0,0,0.25618263945135,0.780356085359269,0.493313713811028,1.10540007114339,0.289803085735052,0,0,0,0.679856056185397,0,0,0,0.637130828648193,0,0.950452044448374,0,0,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0.221729397462564,0,0.196468613246569,0,0,0.324547393654683,0.522389211897802,0.26591592103773,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0.417989933073621,0,0,0,0,0.760272105718513,0,0,0,0.0892997282840798,0,0.225222960966644,0,0,0,1.31780417436063,0,0.436094052142534,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0.0974370051611986,0.252433774244115,0.184099797284599,0.323292113637624,0.355009592516614,0,0,0,0,0.286804595389004,0.121973706129595,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0.269662616320329,0,0,0.738155454624648,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0.570762456703795,0,0.858486162094873,0,0.234004265139238,0,0,0,0.283550194484773,0,0,0,0,0,0.207328115540772,0.576479813667846,0.75745460055828,0,0,1.17217447210047,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0.197030760201927,0,0,0,0,0,0,0,11.9841123831549,32.9077605124427,3.72973962092432,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0.195801157462741,0,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0.160853921143607,1.48418066444991,0,0.177561725313127,0,0.519254429183621,0,0.362578348774867,0,0,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,3.08454505380579,0,0,0,0,0.223874754722178,0,0,0,0,0,0.824328093181778,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0,0,0,0,0,0.30347334256665,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0.48763373908959,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0.507447609232169,0.764637207142375,1.13929437434833,0.714695326373367,0,1.29694662238543,0.540031437238115,3.17250070517708,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0.891547074219827,0,0,0,0,0,0,0,0.16480387422676,0,0.398495976502139,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0.156980256395025,0,0.225595660617181,0,0,0,0,0,0.163232808159148,0,0,0,0,0,1.18608451472249,0.494255755786011,0.417687798021821,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0.195551382734803,0,0.426905989478705,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,2.15361907373044,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.13480708770837,0,0,0,0,0.321506296930038,0.275078873194468,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0,0,0,0,0,0.704815022316672,0.747511887973863,0.78602152549833,0.828478110694391,0.496166021811951,0,0,0,0.544017803369474,0.2506898940227,0.306345576763462,0,0.157054096250234,0,0,0,0,0.332787154610557,0.18628920882415,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0,0.260994291965212,0,0,0,0.358177682162975,0,0,0.353378291891762,0.192914038270915,0,0,0,0,0,0.584580926518165,1.19578356282027,0.981392365535065,0,0,0.211312123358627,0.39997479170986,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0.23658523500376,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0.672567444437648,0,0.227662191351298,0.266107110487916,0,0.171488009437418,0,0,0.118193840883968,0,0,0,0.280272163313789,0.913158720509496,0.215927591218621,0.47775168788705,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.121917924982269,0.647428837187895,0,0,0,0,0,0,0,0,0.150962843566674,0.540219106755613,0,0,0,0,0.196308467114945,0,0,0,0,0.257831551894309,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0.534434810531121,0.36757959813938,0,0,0,0,0,0,0.23806443146374,0,0,0.112131862580613,0,0,0.435433495793923,0,0,0,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p@chr16:3109599..3109646,+ | |||
}} |
Latest revision as of 08:24, 25 July 2015
Short description: | p@chr16:3109599..3109646, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:3109599..3109646, + |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 5.31e-21 | 3 |
myeloid leukocyte | 4.60e-15 | 72 |
blood cell | 7.79e-15 | 11 |
classical monocyte | 4.05e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.05e-14 | 42 |
granulocyte | 1.43e-13 | 8 |
defensive cell | 3.91e-12 | 48 |
phagocyte | 3.91e-12 | 48 |
myeloid cell | 1.19e-10 | 108 |
common myeloid progenitor | 1.19e-10 | 108 |
monopoietic cell | 2.33e-09 | 59 |
monocyte | 2.33e-09 | 59 |
monoblast | 2.33e-09 | 59 |
promonocyte | 2.33e-09 | 59 |
macrophage dendritic cell progenitor | 5.30e-09 | 61 |
myeloid lineage restricted progenitor cell | 3.35e-08 | 66 |
granulocyte monocyte progenitor cell | 4.68e-08 | 67 |
leukocyte | 7.18e-08 | 136 |
perirenal preadipocyte | 7.97e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.27e-10 | 98 |
blood island | 3.27e-10 | 98 |
hemolymphoid system | 5.02e-09 | 108 |
tricuspid valve | 6.97e-08 | 1 |
right atrium valve | 6.97e-08 | 1 |
outflow tract of atrium | 6.97e-08 | 1 |
outflow part of right atrium | 6.97e-08 | 1 |
right cardiac atrium | 6.97e-08 | 1 |
blood | 5.87e-07 | 15 |
haemolymphatic fluid | 5.87e-07 | 15 |
organism substance | 5.87e-07 | 15 |
bone marrow | 6.47e-07 | 76 |
lateral plate mesoderm | 9.30e-07 | 203 |