FFCP PHASE1:Hg19::chr16:3041159..3041167,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:3041159..3041167,+ | |||
|coexpression_cluster_id=C742 | |||
|description=CAGE_peak_at_chr16:3041159..3041167,+ | |||
|id=chr16:3041159..3041167,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.47e-19!254;CL:0002322!3.37e-10!5;CL:0002076!4.21e-08!43;CL:1000415!4.72e-08!2;CL:0000223!2.10e-07!59;CL:0000039!3.44e-07!7;CL:0000586!3.44e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002336;1.65e-16;1!CL:0002261;1.65e-16;1!CL:0002170;1.65e-16;1!CL:0000313;1.65e-16;1!CL:0000240;4.37e-11;6!CL:0000311;4.37e-11;6!CL:0000079;4.37e-11;6!CL:0000237;4.37e-11;6!CL:0000159;6.42e-09;2!CL:1000415;6.42e-09;2!CL:0000082;7.11e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002336,1.93e-16,1;CL:0002261,1.93e-16,1;CL:0002170,1.93e-16,1;CL:0000313,3.07e-16,1;CL:0000240,4.60e-11,6;CL:0000311,4.60e-11,6;CL:0000079,4.60e-11,6;CL:0000237,4.60e-11,6;CL:0000036,4.60e-11,6;CL:0000357,4.60e-11,6;CL:0000114,4.60e-11,6;CL:0000066,4.34e-09,253;CL:1000415,5.94e-09,2;CL:0000159,8.74e-09,2;CL:0000082,6.94e-08,19 | |||
|ontology_enrichment_development_v019=CL:0000357;4.37e-11;6!CL:0000114;4.37e-11;6 | |||
|ontology_enrichment_disease=DOID:305!1.51e-23!106;DOID:0050687!1.76e-16!143;DOID:299!3.47e-14!25;DOID:5093!7.92e-14!4;DOID:1612!7.92e-14!4;DOID:1749!6.57e-11!14;DOID:162!6.51e-09!235;DOID:14566!1.49e-08!239;DOID:3493!9.55e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:2152;1.65e-16;1!DOID:299;2.30e-15;25!DOID:1749;1.81e-10;14!DOID:1324;7.90e-10;15!DOID:0050615;3.00e-09;16!DOID:3493;6.42e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.80e-16,106;DOID:2152,3.07e-16,1;DOID:299,2.17e-15,25;DOID:0050687,6.06e-12,143;DOID:1749,1.84e-10,14;DOID:1324,7.67e-10,15;DOID:0050615,2.91e-09,16;DOID:3493,4.70e-09,2;DOID:162,8.77e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0003729!1.02e-10!5;UBERON:0004119!2.29e-09!169;UBERON:0000925!2.29e-09!169;UBERON:0006595!2.29e-09!169;UBERON:0000344!2.88e-09!12;UBERON:0001007!4.46e-09!155;UBERON:0001555!4.46e-09!155;UBERON:0007026!4.46e-09!155;UBERON:0002294!8.69e-08!7;UBERON:0001173!8.69e-08!7;UBERON:0004912!8.69e-08!7;UBERON:0003343!9.39e-08!4;UBERON:0004785!9.39e-08!4;UBERON:0000466!9.86e-08!126;UBERON:0000464!1.94e-07!104;UBERON:0000077!2.26e-07!130;UBERON:0004921!3.02e-07!129;UBERON:0004185!3.02e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;5.98e-17;1!UBERON:0005056;5.98e-17;1!UBERON:0004176;5.98e-17;1!UBERON:0004911;1.65e-16;1!UBERON:0004909;6.42e-09;2!UBERON:0004802;7.11e-08;19!UBERON:0000115;7.11e-08;19!UBERON:0002048;7.17e-07;22!UBERON:0004807;7.17e-07;22!UBERON:0000117;7.17e-07;22!UBERON:0000171;7.17e-07;22!UBERON:0000170;7.17e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,6.47e-17,1;UBERON:0005056,6.47e-17,1;UBERON:0004911,3.07e-16,1;UBERON:0004909,8.74e-09,2;UBERON:0004802,6.94e-08,19;UBERON:0000115,6.94e-08,19;UBERON:0002048,7.03e-07,22;UBERON:0000117,7.03e-07,22;UBERON:0000171,7.03e-07,22;UBERON:0000170,7.03e-07,22;UBERON:0005597,7.03e-07,22;UBERON:0000118,7.03e-07,22 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0.232387885739037,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.245976877086227,0,0.329250856225877,0,1.3068766413512,1.20364978706088,0,0,0,0,0,0,0,0,0.790204397959275,2.57545848628462,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276242966807689,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68426486367398,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0.260427761085233,0.262379999988587,0,0,0,1.18193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.150323419414493,0,0,0.330991955875499,0,0,0,0,0,3.13575671726008,0,0,0,0,0,0,0,0,0,0,0,0,1.36885967914362,0.961905843018405,0,0,0,0,0,0,0,3.29971648463514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0,0,0,1.72723677587501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2770403570668,0.106787412567695,0,0,0,0,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0.559518030877778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0.550285795565037,0.231051332300676,0,0,0,0,0,0,0,0,0.887136517302272,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0.078493092850514,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00669888618013,1.86485443868962,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,1.07132363163395,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0.305966489225945,0.26721740526556,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:3041159..3041167,+ | |||
}} | }} |
Latest revision as of 08:09, 25 July 2015
Short description: | p@chr16:3041159..3041167, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:3041159..3041167, + |
Coexpression cluster: | C742_lung_gastric_trachea_bile_esophagus_gall_neuroectodermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
buccal mucosa cell | 1.93e-16 | 1 |
endothelial cell of viscerocranial mucosa | 1.93e-16 | 1 |
keratinized cell of the oral mucosa | 1.93e-16 | 1 |
serous secreting cell | 3.07e-16 | 1 |
stratified squamous epithelial cell | 4.60e-11 | 6 |
keratin accumulating cell | 4.60e-11 | 6 |
stratified epithelial cell | 4.60e-11 | 6 |
keratinizing barrier epithelial cell | 4.60e-11 | 6 |
epithelial fate stem cell | 4.60e-11 | 6 |
stratified epithelial stem cell | 4.60e-11 | 6 |
surface ectodermal cell | 4.60e-11 | 6 |
epithelial cell | 4.34e-09 | 253 |
epithelial cell of gall bladder | 5.94e-09 | 2 |
seromucus secreting cell | 8.74e-09 | 2 |
epithelial cell of lung | 6.94e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 6.47e-17 | 1 |
external female genitalia | 6.47e-17 | 1 |
epithelium of female gonad | 3.07e-16 | 1 |
epithelium of gonad | 8.74e-09 | 2 |
respiratory tract epithelium | 6.94e-08 | 19 |
lung epithelium | 6.94e-08 | 19 |
lung | 7.03e-07 | 22 |
respiratory tube | 7.03e-07 | 22 |
respiration organ | 7.03e-07 | 22 |
pair of lungs | 7.03e-07 | 22 |
lung primordium | 7.03e-07 | 22 |
lung bud | 7.03e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.80e-16 | 106 |
ovary epithelial cancer | 3.07e-16 | 1 |
adenocarcinoma | 2.17e-15 | 25 |
cell type cancer | 6.06e-12 | 143 |
squamous cell carcinoma | 1.84e-10 | 14 |
lung cancer | 7.67e-10 | 15 |
respiratory system cancer | 2.91e-09 | 16 |
signet ring cell adenocarcinoma | 4.70e-09 | 2 |
cancer | 8.77e-07 | 235 |