FFCP PHASE1:Hg19::chr16:29841227..29841239,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr16:29841227..29841239,+ to FFCP PHASE1:Hg19::chr16:29841227..29841239,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:29841227..29841239,+ | |||
|coexpression_cluster_id=C3557 | |||
|description=CAGE_peak_at_chr16:29841227..29841239,+ | |||
|id=chr16:29841227..29841239,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.47e-13!12;CL:0000417!1.47e-13!12;CL:0000668!1.47e-13!12;CL:0000414!1.47e-13!12;CL:0000412!1.47e-13!12;CL:0000182!1.47e-13!12;CL:0000066!1.43e-10!254;CL:0002150!4.43e-10!3;CL:0000861!4.43e-10!3;CL:0000223!1.07e-09!59;CL:0000039!2.04e-07!7;CL:0000586!2.04e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002563;2.26e-14;4!CL:0000313;2.57e-14;1!CL:0000182;2.18e-10;12!CL:0002253;5.55e-08;2!CL:0000159;8.32e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,2.11e-14,1;CL:0002563,2.41e-14,4;CL:0000223,1.28e-10,58;CL:0000182,2.25e-10,12;CL:0002253,5.74e-08,2;CL:0000159,7.52e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0009497;1.85e-16;13!UBERON:0004161;2.80e-11;11!UBERON:0001041;5.11e-11;30!UBERON:0003104;1.33e-10;31 | |||
|ontology_enrichment_disease=DOID:305!2.55e-22!106;DOID:0050687!1.06e-19!143;DOID:299!9.22e-12!25;DOID:162!3.11e-10!235;DOID:14566!7.68e-10!239;DOID:3493!2.07e-08!2;DOID:4929!1.23e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3493;9.31e-28;2!DOID:2152;2.57e-14;1!DOID:3119;3.64e-09;14!DOID:299;8.96e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,9.31e-28,2;DOID:2152,2.11e-14,1;DOID:3119,3.54e-09,14;DOID:305,3.70e-09,106;DOID:299,8.78e-09,25;DOID:0050687,4.00e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0004921!1.63e-18!129;UBERON:0004185!1.63e-18!129;UBERON:0009497!3.42e-17!25;UBERON:0000015!3.42e-17!25;UBERON:0002423!3.42e-17!25;UBERON:0006235!3.42e-17!25;UBERON:0004161!3.42e-17!25;UBERON:0000077!8.62e-17!130;UBERON:0001737!1.19e-16!9;UBERON:0001007!2.10e-16!155;UBERON:0001555!2.10e-16!155;UBERON:0007026!2.10e-16!155;UBERON:0004119!1.93e-15!169;UBERON:0000925!1.93e-15!169;UBERON:0006595!1.93e-15!169;UBERON:0001041!8.17e-15!98;UBERON:0008835!6.42e-14!22;UBERON:0003894!6.42e-14!22;UBERON:0009854!3.20e-13!23;UBERON:0007499!5.42e-12!25;UBERON:0009856!1.89e-11!26;UBERON:0001048!5.01e-11!168;UBERON:0003929!7.13e-11!54;UBERON:0002107!1.58e-10!19;UBERON:0006925!1.58e-10!19;UBERON:0008836!1.58e-10!19;UBERON:0005409!2.18e-09!35;UBERON:0005911!4.28e-09!82;UBERON:0000160!1.72e-08!27;UBERON:0008947!6.41e-08!38;UBERON:0003258!6.41e-08!38;UBERON:0002294!8.98e-08!7;UBERON:0001173!8.98e-08!7;UBERON:0004912!8.98e-08!7;UBERON:0005172!1.76e-07!55;UBERON:0005173!1.76e-07!55;UBERON:0001557!2.29e-07!19;UBERON:0005057!2.61e-07!26;UBERON:0000466!2.73e-07!126;UBERON:0003104!3.97e-07!238;UBERON:0009142!3.97e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.95e-20;22!UBERON:0000160;2.06e-18;17!UBERON:0001052;2.26e-14;4!UBERON:0001242;2.26e-14;4!UBERON:0001262;2.26e-14;4!UBERON:0004786;2.26e-14;4!UBERON:0004808;2.26e-14;4!UBERON:0001277;2.26e-14;4!UBERON:0004911;2.57e-14;1!UBERON:0004921;1.40e-12;33!UBERON:0004907;1.09e-11;5!UBERON:0002108;2.00e-11;4!UBERON:0002423;1.09e-08;25!UBERON:0000485;1.32e-08;7!UBERON:0003929;1.32e-08;7!UBERON:0004909;8.32e-08;2!UBERON:0003350;1.23e-07;8!UBERON:0002107;9.35e-07;19!UBERON:0006925;9.35e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.06e-18,17;UBERON:0005409,4.71e-18,25;UBERON:0004921,1.18e-14,118;UBERON:0004911,2.11e-14,1;UBERON:0001052,2.11e-14,4;UBERON:0001242,2.41e-14,4;UBERON:0001262,2.41e-14,4;UBERON:0004786,2.41e-14,4;UBERON:0004808,2.41e-14,4;UBERON:0001277,2.41e-14,4;UBERON:0004907,1.03e-11,5;UBERON:0001007,1.10e-11,145;UBERON:0001555,1.10e-11,145;UBERON:0007026,1.10e-11,145;UBERON:0003929,1.79e-11,54;UBERON:0002108,2.06e-11,4;UBERON:0004119,1.84e-10,160;UBERON:0000925,1.84e-10,160;UBERON:0006595,1.84e-10,160;UBERON:0008835,8.11e-10,22;UBERON:0003894,8.11e-10,22;UBERON:0005911,1.33e-09,82;UBERON:0009854,2.11e-09,23;UBERON:0007499,1.15e-08,25;UBERON:0009497,1.15e-08,25;UBERON:0000015,1.15e-08,25;UBERON:0002423,1.15e-08,25;UBERON:0006235,1.15e-08,25;UBERON:0004161,1.15e-08,25;UBERON:0009856,2.42e-08,26;UBERON:0004909,7.52e-08,2;UBERON:0003350,1.27e-07,8;UBERON:0011216,5.58e-07,223;UBERON:0001046,5.99e-07,19;UBERON:0000485,7.21e-07,9;UBERON:0002107,9.54e-07,19;UBERON:0006925,9.54e-07,19;UBERON:0008836,9.54e-07,19 | |||
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| ||
|short_description=p@chr16:29841227..29841239,+ | |||
}} | }} |
Latest revision as of 07:56, 25 July 2015
Short description: | p@chr16:29841227..29841239, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:29841227..29841239, + |
Coexpression cluster: | C3557_signet_Prostate_Intestinal_lung_colon_rectal_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 2.11e-14 | 1 |
intestinal epithelial cell | 2.41e-14 | 4 |
endodermal cell | 1.28e-10 | 58 |
hepatocyte | 2.25e-10 | 12 |
epithelial cell of large intestine | 5.74e-08 | 2 |
seromucus secreting cell | 7.52e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 9.31e-28 | 2 |
ovary epithelial cancer | 2.11e-14 | 1 |
gastrointestinal system cancer | 3.54e-09 | 14 |
carcinoma | 3.70e-09 | 106 |
adenocarcinoma | 8.78e-09 | 25 |
cell type cancer | 4.00e-08 | 143 |