FFCP PHASE1:Hg19::chr16:2837617..2837632,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:2837617..2837632,- | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_at_chr16:2837617..2837632,- | |description=CAGE_peak_at_chr16:2837617..2837632,- | ||
|id=chr16:2837617..2837632,- | |id=chr16:2837617..2837632,- | ||
|ontology_enrichment_celltype=CL:0000094!2.73e-19!8;CL:0000775!3.40e-14!3;CL:0000081!7.60e-14!11;CL:0002586!9.96e-14!3;CL:0002605!1.12e-12!3;CL:0000149!2.09e-10!4;CL:0000771!1.04e-09!2;CL:0000128!2.43e-09!7;CL:0000126!2.43e-09!7;CL:0000127!2.43e-09!7;CL:0002453!2.43e-09!7 | |ontology_enrichment_celltype=CL:0000094!2.73e-19!8;CL:0000775!3.40e-14!3;CL:0000081!7.60e-14!11;CL:0002586!9.96e-14!3;CL:0002605!1.12e-12!3;CL:0000149!2.09e-10!4;CL:0000771!1.04e-09!2;CL:0000128!2.43e-09!7;CL:0000126!2.43e-09!7;CL:0000127!2.43e-09!7;CL:0002453!2.43e-09!7 | ||
|ontology_enrichment_celltype_v019=CL:0000094;1.13e-32;8!CL:0000775;1.49e-32;3!CL:0002586;2.00e-31;3!CL:0000081;8.87e-24;11!CL:0000149;9.36e-24;4!CL:0000771;1.73e-21;2!CL:0000147;3.40e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,1.03e-32,8;CL:0000775,1.41e-32,3;CL:0002586,2.00e-31,3;CL:0000081,8.26e-24,11;CL:0000149,9.36e-24,4;CL:0000771,1.56e-21,2;CL:0000147,3.40e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;9.44e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,9.44e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000178!7.07e-18!15;UBERON:0000179!7.07e-18!15;UBERON:0000463!7.07e-18!15;UBERON:0000966!3.94e-14!5;UBERON:0005388!3.94e-14!5;UBERON:0001802!3.94e-14!5;UBERON:0001781!9.96e-14!3;UBERON:0001782!9.96e-14!3;UBERON:0005424!9.96e-14!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.28e-44;15!UBERON:0000179;3.28e-44;15!UBERON:0000463;3.28e-44;15!UBERON:0000966;5.37e-33;5!UBERON:0005388;5.37e-33;5!UBERON:0001802;5.37e-33;5!UBERON:0001781;2.00e-31;3!UBERON:0001782;2.00e-31;3!UBERON:0002390;3.39e-19;32!UBERON:0002193;4.45e-11;42!UBERON:0007625;5.07e-09;11!UBERON:0000019;6.81e-09;19!UBERON:0000047;6.81e-09;19!UBERON:0004088;6.81e-09;19!UBERON:0010230;6.81e-09;19!UBERON:0000970;1.85e-08;20!UBERON:0002104;4.60e-08;21!UBERON:0001456;4.60e-08;21!UBERON:0000020;2.23e-07;23!UBERON:0001032;4.46e-07;24!UBERON:0004456;4.46e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.28e-44,15;UBERON:0000179,3.28e-44,15;UBERON:0000463,3.28e-44,15;UBERON:0001782,2.00e-31,3;UBERON:0005424,2.00e-31,3;UBERON:0000966,1.55e-27,6;UBERON:0005388,1.55e-27,6;UBERON:0001802,1.55e-27,6;UBERON:0001781,9.36e-24,4;UBERON:0007625,5.07e-09,11;UBERON:0000019,1.89e-08,20;UBERON:0000047,1.89e-08,20;UBERON:0010312,1.89e-08,20;UBERON:0004088,1.89e-08,20;UBERON:0010230,1.89e-08,20;UBERON:0003072,1.89e-08,20;UBERON:0004128,1.89e-08,20;UBERON:0003071,1.89e-08,20;UBERON:0000970,4.68e-08,21;UBERON:0002104,4.68e-08,21;UBERON:0001456,1.07e-07,22;UBERON:0000020,4.54e-07,24;UBERON:0001032,4.54e-07,24;UBERON:0004456,4.54e-07,24 | |||
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| ||
|short_description=p@chr16:2837617..2837632,- | |short_description=p@chr16:2837617..2837632,- | ||
}} | }} |
Latest revision as of 07:39, 25 July 2015
Short description: | p@chr16:2837617..2837632, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:2837617..2837632, - |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 1.03e-32 | 8 |
neutrophil | 1.41e-32 | 3 |
retinal pigment epithelial cell | 2.00e-31 | 3 |
blood cell | 8.26e-24 | 11 |
visual pigment cell | 9.36e-24 | 4 |
eosinophil | 1.56e-21 | 2 |
pigment cell | 3.40e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
blood | 3.28e-44 | 15 |
haemolymphatic fluid | 3.28e-44 | 15 |
organism substance | 3.28e-44 | 15 |
pigmented layer of retina | 2.00e-31 | 3 |
presumptive retinal pigmented epithelium | 2.00e-31 | 3 |
retina | 1.55e-27 | 6 |
photoreceptor array | 1.55e-27 | 6 |
posterior segment of eyeball | 1.55e-27 | 6 |
layer of retina | 9.36e-24 | 4 |
pigment epithelium of eye | 5.07e-09 | 11 |
camera-type eye | 1.89e-08 | 20 |
simple eye | 1.89e-08 | 20 |
immature eye | 1.89e-08 | 20 |
ocular region | 1.89e-08 | 20 |
eyeball of camera-type eye | 1.89e-08 | 20 |
optic cup | 1.89e-08 | 20 |
optic vesicle | 1.89e-08 | 20 |
eye primordium | 1.89e-08 | 20 |
eye | 4.68e-08 | 21 |
visual system | 4.68e-08 | 21 |
face | 1.07e-07 | 22 |
sense organ | 4.54e-07 | 24 |
sensory system | 4.54e-07 | 24 |
entire sense organ system | 4.54e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 9.44e-07 | 2 |