FFCP PHASE1:Hg19::chr16:2136434..2136445,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:2136434..2136445,+ | |||
|coexpression_cluster_id=C899 | |||
|description=CAGE_peak_at_chr16:2136434..2136445,+ | |description=CAGE_peak_at_chr16:2136434..2136445,+ | ||
|id=chr16:2136434..2136445,+ | |id=chr16:2136434..2136445,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.73e-117;3 | |||
|ontology_enrichment_disease=DOID:5662!2.38e-15!1 | |ontology_enrichment_disease=DOID:5662!2.38e-15!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!5.25e-43!3;UBERON:0004054!5.25e-43!3;UBERON:0005904!1.82e-32!4;UBERON:0000007!5.20e-30!2;UBERON:0004733!1.29e-29!12;UBERON:0002028!1.29e-29!12;UBERON:0007277!1.29e-29!12;UBERON:0004732!2.38e-27!13;UBERON:0002680!9.24e-26!9;UBERON:0001895!9.24e-26!9;UBERON:0010092!9.24e-26!9;UBERON:0003076!1.01e-23!15;UBERON:0003057!1.01e-23!15;UBERON:0002037!2.83e-22!6;UBERON:0006215!2.83e-22!6;UBERON:0001000!1.16e-15!1;UBERON:0005352!1.16e-15!1;UBERON:0001301!1.54e-15!1;UBERON:0003296!1.55e-15!4;UBERON:0010133!1.55e-15!4;UBERON:0000998!1.78e-15!1;UBERON:0006868!1.78e-15!1;UBERON:0007023!6.96e-14!115;UBERON:0003135!3.01e-12!11;UBERON:0001049!1.28e-11!57;UBERON:0005068!1.28e-11!57;UBERON:0006241!1.28e-11!57;UBERON:0007135!1.28e-11!57;UBERON:0002616!3.25e-11!59;UBERON:0000955!2.14e-09!69;UBERON:0006238!2.14e-09!69;UBERON:0001894!2.80e-09!7;UBERON:0006222!2.80e-09!7;UBERON:0002298!6.18e-08!8;UBERON:0001017!7.43e-08!82;UBERON:0003075!1.45e-07!86;UBERON:0007284!1.45e-07!86;UBERON:0005743!1.79e-07!86;UBERON:0002346!3.31e-07!90;UBERON:0004111!3.39e-07!241;UBERON:0002368!8.02e-07!35 | |ontology_enrichment_uberon=UBERON:0006947!5.25e-43!3;UBERON:0004054!5.25e-43!3;UBERON:0005904!1.82e-32!4;UBERON:0000007!5.20e-30!2;UBERON:0004733!1.29e-29!12;UBERON:0002028!1.29e-29!12;UBERON:0007277!1.29e-29!12;UBERON:0004732!2.38e-27!13;UBERON:0002680!9.24e-26!9;UBERON:0001895!9.24e-26!9;UBERON:0010092!9.24e-26!9;UBERON:0003076!1.01e-23!15;UBERON:0003057!1.01e-23!15;UBERON:0002037!2.83e-22!6;UBERON:0006215!2.83e-22!6;UBERON:0001000!1.16e-15!1;UBERON:0005352!1.16e-15!1;UBERON:0001301!1.54e-15!1;UBERON:0003296!1.55e-15!4;UBERON:0010133!1.55e-15!4;UBERON:0000998!1.78e-15!1;UBERON:0006868!1.78e-15!1;UBERON:0007023!6.96e-14!115;UBERON:0003135!3.01e-12!11;UBERON:0001049!1.28e-11!57;UBERON:0005068!1.28e-11!57;UBERON:0006241!1.28e-11!57;UBERON:0007135!1.28e-11!57;UBERON:0002616!3.25e-11!59;UBERON:0000955!2.14e-09!69;UBERON:0006238!2.14e-09!69;UBERON:0001894!2.80e-09!7;UBERON:0006222!2.80e-09!7;UBERON:0002298!6.18e-08!8;UBERON:0001017!7.43e-08!82;UBERON:0003075!1.45e-07!86;UBERON:0007284!1.45e-07!86;UBERON:0005743!1.79e-07!86;UBERON:0002346!3.31e-07!90;UBERON:0004111!3.39e-07!241;UBERON:0002368!8.02e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0000007;1.56e-79;2!UBERON:0002037;2.22e-59;6!UBERON:0003296;1.81e-40;4!UBERON:0010133;1.81e-40;4!UBERON:0002680;5.68e-40;9!UBERON:0001895;5.68e-40;9!UBERON:0004733;2.99e-30;12!UBERON:0002028;2.99e-30;12!UBERON:0004732;5.28e-28;13!UBERON:0001894;1.14e-23;7!UBERON:0000073;3.55e-15;53!UBERON:0002616;3.55e-15;53!UBERON:0000955;2.83e-10;68!UBERON:0001016;3.89e-10;83!UBERON:0001017;8.13e-09;75!UBERON:0007023;3.78e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.56e-79,2;UBERON:0002037,2.22e-59,6;UBERON:0006215,2.22e-59,6;UBERON:0003296,1.81e-40,4;UBERON:0010133,1.81e-40,4;UBERON:0002680,5.68e-40,9;UBERON:0001895,5.68e-40,9;UBERON:0010092,5.68e-40,9;UBERON:0004733,2.99e-30,12;UBERON:0002028,2.99e-30,12;UBERON:0007277,2.99e-30,12;UBERON:0004732,5.28e-28,13;UBERON:0003076,2.09e-24,15;UBERON:0003057,2.09e-24,15;UBERON:0001894,1.14e-23,7;UBERON:0006222,1.14e-23,7;UBERON:0000073,6.22e-19,53;UBERON:0002616,6.22e-19,53;UBERON:0001049,5.63e-18,56;UBERON:0005068,5.63e-18,56;UBERON:0006241,5.63e-18,56;UBERON:0007135,5.63e-18,56;UBERON:0000955,9.02e-15,68;UBERON:0006238,9.02e-15,68;UBERON:0001017,1.45e-12,81;UBERON:0003075,1.45e-12,82;UBERON:0007284,1.45e-12,82;UBERON:0002346,5.13e-12,86;UBERON:0001016,2.13e-11,89;UBERON:0010371,4.61e-10,104;UBERON:0007023,2.58e-09,114;UBERON:0010314,4.60e-08,132 | |||
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|short_description=p@chr16:2136434..2136445,+ | |short_description=p@chr16:2136434..2136445,+ | ||
}} | }} |
Latest revision as of 07:05, 25 July 2015
Short description: | p@chr16:2136434..2136445, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:2136434..2136445, + |
Coexpression cluster: | C899_pituitary_cerebellum_occipital_parietal_testicular_brain_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 1.56e-79 | 2 |
cerebellum | 2.22e-59 | 6 |
rhombic lip | 2.22e-59 | 6 |
gland of diencephalon | 1.81e-40 | 4 |
neuroendocrine gland | 1.81e-40 | 4 |
regional part of metencephalon | 5.68e-40 | 9 |
metencephalon | 5.68e-40 | 9 |
future metencephalon | 5.68e-40 | 9 |
segmental subdivision of hindbrain | 2.99e-30 | 12 |
hindbrain | 2.99e-30 | 12 |
presumptive hindbrain | 2.99e-30 | 12 |
segmental subdivision of nervous system | 5.28e-28 | 13 |
posterior neural tube | 2.09e-24 | 15 |
chordal neural plate | 2.09e-24 | 15 |
diencephalon | 1.14e-23 | 7 |
future diencephalon | 1.14e-23 | 7 |
regional part of nervous system | 6.22e-19 | 53 |
regional part of brain | 6.22e-19 | 53 |
neural tube | 5.63e-18 | 56 |
neural rod | 5.63e-18 | 56 |
future spinal cord | 5.63e-18 | 56 |
neural keel | 5.63e-18 | 56 |
brain | 9.02e-15 | 68 |
future brain | 9.02e-15 | 68 |
central nervous system | 1.45e-12 | 81 |
neural plate | 1.45e-12 | 82 |
presumptive neural plate | 1.45e-12 | 82 |
neurectoderm | 5.13e-12 | 86 |
nervous system | 2.13e-11 | 89 |
ecto-epithelium | 4.61e-10 | 104 |
adult organism | 2.58e-09 | 114 |
structure with developmental contribution from neural crest | 4.60e-08 | 132 |