FFCP PHASE1:Hg19::chr16:18944204..18944211,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:18944204..18944211,- | |||
|coexpression_cluster_id=C122 | |coexpression_cluster_id=C122 | ||
|description=CAGE_peak_at_chr16:18944204..18944211,- | |description=CAGE_peak_at_chr16:18944204..18944211,- | ||
|id=chr16:18944204..18944211,- | |id=chr16:18944204..18944211,- | ||
|ontology_enrichment_celltype=CL:0000066!7.51e-08!254;CL:0002327!1.40e-07!4;CL:0000159!2.69e-07!2 | |ontology_enrichment_celltype=CL:0000066!7.51e-08!254;CL:0002327!1.40e-07!4;CL:0000159!2.69e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002327;2.43e-08;4!CL:0000243;1.25e-07;15!CL:0000125;1.25e-07;15!CL:0000095;6.38e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,2.26e-08,4;CL:0000243,1.25e-07,15;CL:0000125,1.25e-07,15;CL:0000030,1.25e-07,15;CL:0000339,1.25e-07,15;CL:0000095,6.38e-07,17;CL:0000123,6.38e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.83e-11;10!CL:0000339;1.25e-07;15 | |||
|ontology_enrichment_disease=DOID:162!8.86e-19!235;DOID:14566!3.86e-18!239;DOID:0050687!1.56e-17!143;DOID:305!9.39e-16!106;DOID:0050686!3.87e-09!137;DOID:4468!1.23e-07!2;DOID:1749!6.55e-07!14;DOID:299!7.45e-07!25 | |ontology_enrichment_disease=DOID:162!8.86e-19!235;DOID:14566!3.86e-18!239;DOID:0050687!1.56e-17!143;DOID:305!9.39e-16!106;DOID:0050686!3.87e-09!137;DOID:4468!1.23e-07!2;DOID:1749!6.55e-07!14;DOID:299!7.45e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:4468;2.37e-15;2!DOID:3093;2.03e-10;11 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,2.37e-15,2;DOID:3093,2.03e-10,11 | |||
|ontology_enrichment_uberon=UBERON:0001911!1.40e-07!4;UBERON:0005333!1.40e-07!4;UBERON:0008425!1.40e-07!4;UBERON:0005311!1.40e-07!4 | |ontology_enrichment_uberon=UBERON:0001911!1.40e-07!4;UBERON:0005333!1.40e-07!4;UBERON:0008425!1.40e-07!4;UBERON:0005311!1.40e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.33e-29;1!UBERON:0001911;2.43e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,1.33e-29,1;UBERON:0001911,2.26e-08,4;UBERON:0005333,2.26e-08,4;UBERON:0008425,2.26e-08,4;UBERON:0005311,2.26e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.268675568108545,1.74380363108377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.490080431962063,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22273980289274,0,0,0,0.260427761085233,0.174919999992391,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.762569244632931,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,9.10817917076088,0.158936578980379,1.47698645169619,0.652931232636591,0.424059214301822,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0.343972064943233,0,0,0.0821154570532092,0,0,0,0.822251547880505,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,2.44627570932505,1.255234155748,0,0.866851769704557,0,0,0,0.429765441419957,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415045904808692,0.249960815924213,0.606596470166591,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00013882331577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0.491545817507439,0,0,0.106691729694141,0,0,0,0,0,0,0.215649622793364,0.157265941855896,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0.472775363535873,0.222462803784138,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0.335566295393377,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0.560659312903067,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.268675568108545,1.74380363108377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.490080431962063,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22273980289274,0,0,0,0.260427761085233,0.174919999992391,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.762569244632931,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,9.10817917076088,0.158936578980379,1.47698645169619,0.652931232636591,0.424059214301822,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0.343972064943233,0,0,0.0821154570532092,0,0,0,0.822251547880505,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,2.44627570932505,1.255234155748,0,0.866851769704557,0,0,0,0.429765441419957,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415045904808692,0.249960815924213,0.606596470166591,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00013882331577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0.491545817507439,0,0,0.106691729694141,0,0,0,0,0,0,0.215649622793364,0.157265941855896,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0.472775363535873,0.222462803784138,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0.335566295393377,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0.560659312903067,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:18944204..18944211,- | |short_description=p@chr16:18944204..18944211,- | ||
}} | }} |
Latest revision as of 06:46, 25 July 2015
Short description: | p@chr16:18944204..18944211, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:18944204..18944211, - |
Coexpression cluster: | C122_chronic_Reticulocytes_skeletal_leukemia_acute_colon_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 2.26e-08 | 4 |
glial cell (sensu Vertebrata) | 1.25e-07 | 15 |
glial cell | 1.25e-07 | 15 |
glioblast | 1.25e-07 | 15 |
glioblast (sensu Vertebrata) | 1.25e-07 | 15 |
neuron associated cell | 6.38e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 6.38e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 1.33e-29 | 1 |
mammary gland | 2.26e-08 | 4 |
mammary bud | 2.26e-08 | 4 |
mammary ridge | 2.26e-08 | 4 |
mammary placode | 2.26e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 2.37e-15 | 2 |
nervous system cancer | 2.03e-10 | 11 |