FFCP PHASE1:Hg19::chr16:15865458..15865471,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:15865458..15865471,- | |||
|coexpression_cluster_id=C48 | |coexpression_cluster_id=C48 | ||
|description=CAGE_peak_at_chr16:15865458..15865471,- | |description=CAGE_peak_at_chr16:15865458..15865471,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.92e-29;2!UBERON:0005754;6.44e-16;1!UBERON:0004874;9.28e-16;1!UBERON:0009143;1.24e-15;1!UBERON:0006603;7.82e-09;65!UBERON:0006965;1.55e-08;2 | |ontology_enrichment_development_v019=UBERON:0007297;1.92e-29;2!UBERON:0005754;6.44e-16;1!UBERON:0004874;9.28e-16;1!UBERON:0009143;1.24e-15;1!UBERON:0006603;7.82e-09;65!UBERON:0006965;1.55e-08;2 | ||
|ontology_enrichment_disease=DOID:114!8.72e-10!2 | |ontology_enrichment_disease=DOID:114!8.72e-10!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.26e-33!115;UBERON:0006947!3.92e-15!3;UBERON:0004054!3.92e-15!3;UBERON:0003135!6.10e-15!11;UBERON:0005904!1.83e-11!4;UBERON:0003127!8.33e-10!2;UBERON:0003101!1.27e-09!22;UBERON:0000079!1.27e-09!22;UBERON:0000160!3.04e-07!27;UBERON:0000059!6.10e-07!11;UBERON:0005409!6.28e-07!35;UBERON:0003103!7.26e-07!69;UBERON:0003978!9.63e-07!3;UBERON:0009751!9.63e-07!3;UBERON:0000946!9.63e-07!3;UBERON:0002523!9.63e-07!3;UBERON:0005983!9.63e-07!3;UBERON:0002165!9.63e-07!3;UBERON:0002062!9.63e-07!3;UBERON:0007280!9.63e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!3.26e-33!115;UBERON:0006947!3.92e-15!3;UBERON:0004054!3.92e-15!3;UBERON:0003135!6.10e-15!11;UBERON:0005904!1.83e-11!4;UBERON:0003127!8.33e-10!2;UBERON:0003101!1.27e-09!22;UBERON:0000079!1.27e-09!22;UBERON:0000160!3.04e-07!27;UBERON:0000059!6.10e-07!11;UBERON:0005409!6.28e-07!35;UBERON:0003103!7.26e-07!69;UBERON:0003978!9.63e-07!3;UBERON:0009751!9.63e-07!3;UBERON:0000946!9.63e-07!3;UBERON:0002523!9.63e-07!3;UBERON:0005983!9.63e-07!3;UBERON:0002165!9.63e-07!3;UBERON:0002062!9.63e-07!3;UBERON:0007280!9.63e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;6.06e-43;3!UBERON:0004054;6.06e-43;3!UBERON:0005904;2.03e-32;4!UBERON:0003135;5.53e-21;11!UBERON:0004175;8.49e-17;21!UBERON:0003101;3.98e-16;22!UBERON:0000079;3.98e-16;22!UBERON:0000998;6.44e-16;1!UBERON:0006868;6.44e-16;1!UBERON:0000989;9.28e-16;1!UBERON:0008811;9.28e-16;1!UBERON:0006834;2.38e-15;1!UBERON:0001000;2.38e-15;1!UBERON:0001301;2.38e-15;1!UBERON:0005352;2.38e-15;1!UBERON:0000058;2.16e-13;10!UBERON:0001255;1.39e-08;2!UBERON:0001556;1.39e-08;2!UBERON:0003133;1.10e-07;44!UBERON:0005156;8.97e-07;59!UBERON:0000990;8.97e-07;59 | |ontology_enrichment_uberon_v019=UBERON:0006947;6.06e-43;3!UBERON:0004054;6.06e-43;3!UBERON:0005904;2.03e-32;4!UBERON:0003135;5.53e-21;11!UBERON:0004175;8.49e-17;21!UBERON:0003101;3.98e-16;22!UBERON:0000079;3.98e-16;22!UBERON:0000998;6.44e-16;1!UBERON:0006868;6.44e-16;1!UBERON:0000989;9.28e-16;1!UBERON:0008811;9.28e-16;1!UBERON:0006834;2.38e-15;1!UBERON:0001000;2.38e-15;1!UBERON:0001301;2.38e-15;1!UBERON:0005352;2.38e-15;1!UBERON:0000058;2.16e-13;10!UBERON:0001255;1.39e-08;2!UBERON:0001556;1.39e-08;2!UBERON:0003133;1.10e-07;44!UBERON:0005156;8.97e-07;59!UBERON:0000990;8.97e-07;59 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,6.07e-43,3;UBERON:0004054,6.07e-43,3;UBERON:0005904,2.03e-32,4;UBERON:0003135,5.39e-21,11;UBERON:0003101,3.56e-16,22;UBERON:0000079,3.56e-16,22;UBERON:0000998,6.44e-16,1;UBERON:0006868,6.44e-16,1;UBERON:0000989,8.63e-16,1;UBERON:0008811,8.63e-16,1;UBERON:0006258,8.63e-16,1;UBERON:0005876,8.63e-16,1;UBERON:0004874,8.63e-16,1;UBERON:0006834,1.78e-15,1;UBERON:0001000,2.06e-15,1;UBERON:0005352,2.06e-15,1;UBERON:0001301,2.75e-15,1;UBERON:0004175,3.84e-14,25;UBERON:0007023,5.36e-14,114;UBERON:0003064,8.60e-13,28;UBERON:0004876,2.49e-12,11;UBERON:0005156,2.76e-11,59;UBERON:0000990,2.76e-11,59;UBERON:0003133,2.22e-10,48;UBERON:0001255,1.39e-08,2;UBERON:0001556,1.39e-08,2;UBERON:0000058,2.59e-07,19;UBERON:0000080,2.86e-07,9;UBERON:0002120,2.86e-07,9;UBERON:0004875,2.86e-07,9;UBERON:0005721,2.86e-07,9;UBERON:0005754,2.86e-07,9;UBERON:0007297,2.86e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.58646378851925,0,0,0,0,0,0,0,0,6.21453455512682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38510465306835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.707660516026713,1.22206028986725,0,0,0,0,0,0,0,0,0,1.57833761139756,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,2.23074737923365,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,3.96968942711435,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80534113556182,0,0,0.913158720509496,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,8.04435395362765,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.694567422971502,0.655678681511872,0,10.0510811919101,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0.909344378618873,0.267964130156178,0,0,0.213233981900981,0,0,0,0,0.12729431655633,0,0,0,0,0.358611026963382,0.332660356546013,0,0,0,0,0,1.71138021856013,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.58646378851925,0,0,0,0,0,0,0,0,6.21453455512682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38510465306835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.707660516026713,1.22206028986725,0,0,0,0,0,0,0,0,0,1.57833761139756,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,2.23074737923365,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,3.96968942711435,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80534113556182,0,0,0.913158720509496,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,8.04435395362765,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.694567422971502,0.655678681511872,0,10.0510811919101,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0.909344378618873,0.267964130156178,0,0,0.213233981900981,0,0,0,0,0.12729431655633,0,0,0,0,0.358611026963382,0.332660356546013,0,0,0,0,0,1.71138021856013,0.406896178315738,0,0,0 | ||
|short_description=p@chr16:15865458..15865471,- | |short_description=p@chr16:15865458..15865471,- | ||
}} | }} |
Latest revision as of 06:38, 25 July 2015
Short description: | p@chr16:15865458..15865471, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:15865458..15865471, - |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 6.07e-43 | 3 |
internal male genitalia | 6.07e-43 | 3 |
duct of male reproductive system | 2.03e-32 | 4 |
male reproductive organ | 5.39e-21 | 11 |
male organism | 3.56e-16 | 22 |
male reproductive system | 3.56e-16 | 22 |
seminal vesicle | 6.44e-16 | 1 |
seminal fluid secreting gland | 6.44e-16 | 1 |
penis | 8.63e-16 | 1 |
intromittent organ | 8.63e-16 | 1 |
lateral plate mesenchyme | 8.63e-16 | 1 |
undifferentiated genital tubercle | 8.63e-16 | 1 |
somatopleure | 8.63e-16 | 1 |
uterus or analog | 1.78e-15 | 1 |
vas deferens | 2.06e-15 | 1 |
spermatic cord | 2.06e-15 | 1 |
epididymis | 2.75e-15 | 1 |
internal genitalia | 3.84e-14 | 25 |
adult organism | 5.36e-14 | 114 |
intermediate mesoderm | 8.60e-13 | 28 |
urogenital ridge | 2.49e-12 | 11 |
reproductive structure | 2.76e-11 | 59 |
reproductive system | 2.76e-11 | 59 |
reproductive organ | 2.22e-10 | 48 |
urinary bladder | 1.39e-08 | 2 |
lower urinary tract | 1.39e-08 | 2 |
duct | 2.59e-07 | 19 |
mesonephros | 2.86e-07 | 9 |
pronephros | 2.86e-07 | 9 |
nephrogenic cord | 2.86e-07 | 9 |
pronephric mesoderm | 2.86e-07 | 9 |
rostral part of nephrogenic cord | 2.86e-07 | 9 |
presumptive pronephric mesoderm | 2.86e-07 | 9 |