FFCP PHASE1:Hg19::chr15:81187409..81187422,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:81187409..81187422,+ | |||
|coexpression_cluster_id=C387 | |||
|description=CAGE_peak_at_chr15:81187409..81187422,+ | |description=CAGE_peak_at_chr15:81187409..81187422,+ | ||
|id=chr15:81187409..81187422,+ | |id=chr15:81187409..81187422,+ | ||
|ontology_enrichment_celltype=CL:0000057!1.64e-31!75;CL:0000055!1.19e-18!180;CL:0002620!1.56e-13!23;CL:0002334!8.28e-10!12;CL:0000134!6.29e-09!358;CL:0002320!6.38e-09!365;CL:0000219!8.73e-09!390;CL:0000048!1.09e-08!430;CL:0000499!1.95e-08!27;CL:0000723!2.72e-08!436;CL:1000306!8.30e-08!4;CL:0002547!8.30e-08!4;CL:0000034!8.79e-08!444;CL:0002579!3.60e-07!3;CL:0000135!5.00e-07!3;CL:0000386!5.00e-07!3;CL:0000388!5.00e-07!3;CL:0002615!5.72e-07!3;CL:0002580!7.33e-07!3 | |ontology_enrichment_celltype=CL:0000057!1.64e-31!75;CL:0000055!1.19e-18!180;CL:0002620!1.56e-13!23;CL:0002334!8.28e-10!12;CL:0000134!6.29e-09!358;CL:0002320!6.38e-09!365;CL:0000219!8.73e-09!390;CL:0000048!1.09e-08!430;CL:0000499!1.95e-08!27;CL:0000723!2.72e-08!436;CL:1000306!8.30e-08!4;CL:0002547!8.30e-08!4;CL:0000034!8.79e-08!444;CL:0002579!3.60e-07!3;CL:0000135!5.00e-07!3;CL:0000386!5.00e-07!3;CL:0000388!5.00e-07!3;CL:0002615!5.72e-07!3;CL:0002580!7.33e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002579;8.64e-19;3!CL:0000135;2.89e-18;3!CL:0000388;2.89e-18;3!CL:0002615;3.76e-18;3!CL:0002334;1.79e-17;12!CL:0000136;3.15e-11;13!CL:0002580;8.91e-09;3!CL:0000214;9.44e-09;3!CL:0002581;1.86e-07;1!CL:0002616;1.86e-07;1!CL:0000511;2.92e-07;1!CL:0002625;2.92e-07;1!CL:0000216;2.92e-07;1!CL:0002591;7.29e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,9.18e-19,3;CL:0000057,1.60e-18,76;CL:0000135,2.50e-18,3;CL:0000388,2.50e-18,3;CL:0002615,3.77e-18,3;CL:0002334,1.45e-17,12;CL:0000136,1.06e-09,15;CL:0002580,6.66e-09,3;CL:0000214,9.45e-09,3;CL:0000134,5.65e-08,354;CL:0002320,1.05e-07,361;CL:0002581,1.75e-07,1;CL:0002616,1.98e-07,1;CL:0000511,3.01e-07,1;CL:0002625,3.01e-07,1;CL:0000216,3.01e-07,1;CL:0000048,5.32e-07,427;CL:0000723,8.09e-07,433;CL:0000219,9.13e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!2.25e-09!5;DOID:450!2.25e-09!5;DOID:66!2.25e-09!5;DOID:423!2.25e-09!5;DOID:0080000!2.25e-09!5;DOID:11722!2.25e-09!5 | |||
|ontology_enrichment_disease_v019=DOID:3369;3.94e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,3.40e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!1.73e-12!6;UBERON:0002358!1.73e-12!6;UBERON:0003684!1.73e-12!6;UBERON:0001178!1.73e-12!6;UBERON:0004457!5.04e-10!12;UBERON:0000042!5.04e-10!12;UBERON:0002384!1.15e-09!375;UBERON:0002097!1.98e-08!40;UBERON:0000415!8.30e-08!4;UBERON:0007240!8.30e-08!4;UBERON:0005742!8.30e-08!4;UBERON:0005734!8.30e-08!4;UBERON:0004664!8.30e-08!4;UBERON:0004663!8.30e-08!4;UBERON:0003102!1.79e-07!95;UBERON:0002199!5.00e-07!45;UBERON:0002416!5.00e-07!45;UBERON:0000043!5.00e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;7.79e-41;9!UBERON:0000042;7.79e-41;9!UBERON:0003688;3.85e-35;6!UBERON:0002358;3.85e-35;6!UBERON:0003684;3.85e-35;6!UBERON:0001178;3.85e-35;6!UBERON:0007846;2.89e-18;3!UBERON:0000043;2.89e-18;3!UBERON:0007845;2.89e-18;3!UBERON:0005406;3.09e-13;2!UBERON:0006915;9.44e-09;3!UBERON:0007616;9.44e-09;3!UBERON:0002217;9.44e-09;3!UBERON:0002018;9.44e-09;3!UBERON:0001136;2.92e-07;1!UBERON:0001343;2.92e-07;1!UBERON:0004910;2.92e-07;1!UBERON:0004813;2.92e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.10e-35,6;UBERON:0002358,4.10e-35,6;UBERON:0003684,4.10e-35,6;UBERON:0001178,4.10e-35,6;UBERON:0004457,2.53e-30,12;UBERON:0000042,2.53e-30,12;UBERON:0007846,2.50e-18,3;UBERON:0000043,2.50e-18,3;UBERON:0007845,2.50e-18,3;UBERON:0005406,3.09e-13,2;UBERON:0006915,9.45e-09,3;UBERON:0007616,9.45e-09,3;UBERON:0002217,9.45e-09,3;UBERON:0002018,9.45e-09,3;UBERON:0004923,1.29e-08,66;UBERON:0004458,2.98e-08,49;UBERON:0002384,3.64e-08,371;UBERON:0001136,3.01e-07,1;UBERON:0001343,3.01e-07,1;UBERON:0004910,3.01e-07,1;UBERON:0005154,3.01e-07,1;UBERON:0005295,3.01e-07,1;UBERON:0004813,3.01e-07,1;UBERON:0005297,3.01e-07,1;UBERON:0005294,3.01e-07,1;UBERON:0010141,3.01e-07,1;UBERON:0005891,3.01e-07,1 | |||
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| ||
|short_description=p@chr15:81187409..81187422,+ | |short_description=p@chr15:81187409..81187422,+ | ||
}} | }} |
Latest revision as of 04:49, 25 July 2015
Short description: | p@chr15:81187409..81187422, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:81187409..81187422, + |
Coexpression cluster: | C387_Preadipocyte_Fibroblast_Adipocyte_tenocyte_Synoviocyte_mesothelioma_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 9.18e-19 | 3 |
fibroblast | 1.60e-18 | 76 |
fibrocyte | 2.50e-18 | 3 |
tendon cell | 2.50e-18 | 3 |
adipocyte of omentum tissue | 3.77e-18 | 3 |
preadipocyte | 1.45e-17 | 12 |
fat cell | 1.06e-09 | 15 |
preadipocyte of the breast | 6.66e-09 | 3 |
synovial cell | 9.45e-09 | 3 |
mesenchymal cell | 5.65e-08 | 354 |
connective tissue cell | 1.05e-07 | 361 |
perirenal preadipocyte | 1.75e-07 | 1 |
perirenal adipocyte cell | 1.98e-07 | 1 |
androgen binding protein secreting cell | 3.01e-07 | 1 |
seminiferous tubule epithelial cell | 3.01e-07 | 1 |
Sertoli cell | 3.01e-07 | 1 |
multi fate stem cell | 5.32e-07 | 427 |
somatic stem cell | 8.09e-07 | 433 |
motile cell | 9.13e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.10e-35 | 6 |
peritoneum | 4.10e-35 | 6 |
abdominal cavity | 4.10e-35 | 6 |
visceral peritoneum | 4.10e-35 | 6 |
cavity lining | 2.53e-30 | 12 |
serous membrane | 2.53e-30 | 12 |
dense regular connective tissue | 2.50e-18 | 3 |
tendon | 2.50e-18 | 3 |
regular connective tissue | 2.50e-18 | 3 |
perirenal fat | 3.09e-13 | 2 |
stratified squamous epithelium | 9.45e-09 | 3 |
layer of synovial tissue | 9.45e-09 | 3 |
synovial joint | 9.45e-09 | 3 |
synovial membrane of synovial joint | 9.45e-09 | 3 |
organ component layer | 1.29e-08 | 66 |
body cavity or lining | 2.98e-08 | 49 |
connective tissue | 3.64e-08 | 371 |
mesothelium | 3.01e-07 | 1 |
seminiferous tubule of testis | 3.01e-07 | 1 |
epithelium of male gonad | 3.01e-07 | 1 |
epithelial cord | 3.01e-07 | 1 |
sex cord | 3.01e-07 | 1 |
seminiferous tubule epithelium | 3.01e-07 | 1 |
testis sex cord | 3.01e-07 | 1 |
genital ridge | 3.01e-07 | 1 |
primitive sex cord of indifferent gonad | 3.01e-07 | 1 |
coelomic epithelium | 3.01e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 3.40e-07 | 1 |