FFCP PHASE1:Hg19::chr15:80842672..80842689,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:80842672..80842689,- | |||
|coexpression_cluster_id=C3522 | |||
|description=CAGE_peak_at_chr15:80842672..80842689,- | |description=CAGE_peak_at_chr15:80842672..80842689,- | ||
|id=chr15:80842672..80842689,- | |id=chr15:80842672..80842689,- | ||
|ontology_enrichment_celltype=CL:0000055!6.21e-35!180;CL:0000057!6.51e-29!75;CL:0002620!7.90e-22!23;CL:0000680!6.51e-14!57;CL:0000056!6.51e-14!57;CL:0000355!6.51e-14!57;CL:0000187!3.00e-13!54;CL:0000183!1.75e-12!59;CL:0000393!5.35e-11!60;CL:0000211!5.35e-11!60;CL:0000192!6.96e-11!42;CL:0000514!6.96e-11!42;CL:0000048!9.43e-10!430;CL:0000359!2.06e-09!32;CL:0000723!3.22e-09!436;CL:0000034!1.54e-08!444;CL:0000222!6.43e-08!119;CL:0002556!9.21e-08!6 | |ontology_enrichment_celltype=CL:0000055!6.21e-35!180;CL:0000057!6.51e-29!75;CL:0002620!7.90e-22!23;CL:0000680!6.51e-14!57;CL:0000056!6.51e-14!57;CL:0000355!6.51e-14!57;CL:0000187!3.00e-13!54;CL:0000183!1.75e-12!59;CL:0000393!5.35e-11!60;CL:0000211!5.35e-11!60;CL:0000192!6.96e-11!42;CL:0000514!6.96e-11!42;CL:0000048!9.43e-10!430;CL:0000359!2.06e-09!32;CL:0000723!3.22e-09!436;CL:0000034!1.54e-08!444;CL:0000222!6.43e-08!119;CL:0002556!9.21e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0002620;3.36e-24;23!CL:1000306;4.80e-12;4!CL:0002547;4.80e-12;4!CL:0000057;1.95e-08;73!CL:0000708;5.17e-08;3!CL:0002590;1.61e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,4.07e-24,23;CL:0000057,1.81e-21,76;CL:1000306,3.25e-12,4;CL:0002547,3.25e-12,4;CL:0000708,5.45e-08,3;CL:0002590,1.30e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.01e-07!5;DOID:450!1.01e-07!5;DOID:66!1.01e-07!5;DOID:423!1.01e-07!5;DOID:0080000!1.01e-07!5;DOID:11722!1.01e-07!5 | |ontology_enrichment_disease=DOID:17!1.01e-07!5;DOID:450!1.01e-07!5;DOID:66!1.01e-07!5;DOID:423!1.01e-07!5;DOID:0080000!1.01e-07!5;DOID:11722!1.01e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:17;3.19e-16;5!DOID:450;3.19e-16;5!DOID:66;3.19e-16;5!DOID:423;3.19e-16;5!DOID:0080000;3.19e-16;5!DOID:11722;3.19e-16;5!DOID:1192;2.67e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.14e-16,5;DOID:450,4.14e-16,5;DOID:66,4.14e-16,5;DOID:423,4.14e-16,5;DOID:0080000,4.14e-16,5;DOID:11722,4.14e-16,5;DOID:1192,1.69e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000914!5.79e-16!83;UBERON:0002329!5.79e-16!83;UBERON:0003077!5.79e-16!83;UBERON:0003059!5.79e-16!83;UBERON:0007282!5.79e-16!83;UBERON:0009618!5.79e-16!83;UBERON:0007285!5.79e-16!83;UBERON:0004290!3.20e-14!70;UBERON:0000475!3.82e-14!365;UBERON:0002097!1.11e-13!40;UBERON:0001134!2.38e-12!61;UBERON:0002036!2.38e-12!61;UBERON:0003082!2.38e-12!61;UBERON:0002199!2.93e-12!45;UBERON:0002416!2.93e-12!45;UBERON:0000486!5.54e-12!82;UBERON:0002385!1.20e-11!63;UBERON:0001015!1.20e-11!63;UBERON:0000383!1.20e-11!63;UBERON:0005256!1.38e-10!143;UBERON:0003102!3.32e-08!95;UBERON:0001758!9.21e-08!6;UBERON:0003672!9.21e-08!6;UBERON:0002100!1.22e-07!216;UBERON:0000119!1.88e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;7.76e-15;41!UBERON:0002199;1.86e-14;46!UBERON:0002416;1.86e-14;46!UBERON:0004797;4.80e-12;4!UBERON:0000415;4.80e-12;4!UBERON:0007240;4.80e-12;4!UBERON:0005742;4.80e-12;4!UBERON:0005734;4.80e-12;4!UBERON:0004664;4.80e-12;4!UBERON:0004663;4.80e-12;4!UBERON:0003102;2.36e-10;50!UBERON:0000947;5.11e-08;21!UBERON:0010191;5.11e-08;21!UBERON:0003210;5.17e-08;3!UBERON:0004573;9.94e-07;33!UBERON:0004571;9.94e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,6.62e-21,41;UBERON:0002199,2.67e-18,46;UBERON:0002416,2.67e-18,46;UBERON:0000415,3.25e-12,4;UBERON:0007240,3.25e-12,4;UBERON:0005742,3.25e-12,4;UBERON:0005734,3.25e-12,4;UBERON:0004664,3.25e-12,4;UBERON:0004663,3.25e-12,4;UBERON:0003102,2.25e-09,99;UBERON:0000947,4.49e-08,21;UBERON:0010191,4.49e-08,21;UBERON:0003210,5.45e-08,3;UBERON:0004797,3.70e-07,7 | |||
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|short_description=p@chr15:80842672..80842689,- | |short_description=p@chr15:80842672..80842689,- | ||
}} | }} |
Latest revision as of 04:47, 25 July 2015
Short description: | p@chr15:80842672..80842689, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:80842672..80842689, - |
Coexpression cluster: | C3522_Fibroblast_Smooth_basal_mesenchymal_Meningeal_Ewing_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 4.07e-24 | 23 |
fibroblast | 1.81e-21 | 76 |
fibroblast of tunica adventitia of artery | 3.25e-12 | 4 |
fibroblast of the aortic adventitia | 3.25e-12 | 4 |
leptomeningeal cell | 5.45e-08 | 3 |
smooth muscle cell of the brain vasculature | 1.30e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin of body | 6.62e-21 | 41 |
integument | 2.67e-18 | 46 |
integumental system | 2.67e-18 | 46 |
artery wall | 3.25e-12 | 4 |
tunica adventitia of artery | 3.25e-12 | 4 |
adventitia | 3.25e-12 | 4 |
tunica adventitia of blood vessel | 3.25e-12 | 4 |
aorta tunica adventitia | 3.25e-12 | 4 |
aorta wall | 3.25e-12 | 4 |
surface structure | 2.25e-09 | 99 |
aorta | 4.49e-08 | 21 |
aortic system | 4.49e-08 | 21 |
blood-cerebrospinal fluid barrier | 5.45e-08 | 3 |
blood vessel layer | 3.70e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.14e-16 | 5 |
myotonic disease | 4.14e-16 | 5 |
muscle tissue disease | 4.14e-16 | 5 |
myopathy | 4.14e-16 | 5 |
muscular disease | 4.14e-16 | 5 |
myotonic dystrophy | 4.14e-16 | 5 |
peripheral nervous system neoplasm | 1.69e-07 | 3 |