FFCP PHASE1:Hg19::chr15:80603266..80603271,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:80603266..80603271,- | |||
|coexpression_cluster_id=C177 | |||
|description=CAGE_peak_at_chr15:80603266..80603271,- | |description=CAGE_peak_at_chr15:80603266..80603271,- | ||
|id=chr15:80603266..80603271,- | |id=chr15:80603266..80603271,- | ||
|ontology_enrichment_celltype=CL:0000148!8.92e-32!10;CL:0000541!8.92e-32!10;CL:0000147!1.80e-22!14;CL:0002567!4.97e-21!3;CL:0000710!5.14e-20!20;CL:0002077!3.31e-18!33;CL:0000075!1.58e-14!27;CL:0002166!1.21e-09!3;CL:0002566!6.52e-08!1;CL:0002379!1.11e-07!1;CL:0000325!1.63e-07!39;CL:0000221!2.74e-07!71;CL:0000333!9.81e-07!41 | |ontology_enrichment_celltype=CL:0000148!8.92e-32!10;CL:0000541!8.92e-32!10;CL:0000147!1.80e-22!14;CL:0002567!4.97e-21!3;CL:0000710!5.14e-20!20;CL:0002077!3.31e-18!33;CL:0000075!1.58e-14!27;CL:0002166!1.21e-09!3;CL:0002566!6.52e-08!1;CL:0002379!1.11e-07!1;CL:0000325!1.63e-07!39;CL:0000221!2.74e-07!71;CL:0000333!9.81e-07!41 | ||
|ontology_enrichment_celltype_v019=CL:0002567;1.71e-44;3!CL:0000148;3.59e-14;10!CL:0000147;2.04e-10;14!CL:0000710;1.40e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.91e-44,3;CL:0000148,3.71e-14,10;CL:0000541,3.71e-14,10;CL:0000147,2.08e-10,14;CL:0000710,1.42e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!7.36e-15!2;DOID:3620!1.11e-07!1;DOID:3565!1.11e-07!1 | |ontology_enrichment_disease=DOID:1909!7.36e-15!2;DOID:3620!1.11e-07!1;DOID:3565!1.11e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:1909;7.41e-67;2!DOID:4231;1.17e-17;2!DOID:1907;1.17e-17;2!DOID:1115;1.45e-07;20!DOID:201;9.23e-07;6!DOID:0060100;9.23e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,7.41e-67,2;DOID:4231,1.07e-17,2;DOID:1907,1.07e-17,2;DOID:1115,1.42e-07,20;DOID:201,8.97e-07,6;DOID:0060100,8.97e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001282!1.75e-07!1;UBERON:0009842!1.75e-07!1;UBERON:0003704!1.75e-07!1;UBERON:0001171!1.75e-07!1;UBERON:0001172!1.75e-07!1;UBERON:0001708!1.93e-07!4;UBERON:0001704!1.93e-07!4;UBERON:0002394!3.44e-07!4;UBERON:0003928!3.44e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;6.78e-10;15!UBERON:0007376;6.78e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,6.78e-10,15;UBERON:0007376,6.78e-10,15;UBERON:0007383,6.78e-10,15;UBERON:0002097,5.06e-08,41;UBERON:0002199,3.19e-07,46;UBERON:0002416,3.19e-07,46 | |||
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|short_description=p@chr15:80603266..80603271,- | |short_description=p@chr15:80603266..80603271,- | ||
}} | }} |
Latest revision as of 04:45, 25 July 2015
Short description: | p@chr15:80603266..80603271, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:80603266..80603271, - |
Coexpression cluster: | C177_melanoma_Melanocyte_mesenchymal_retina_Mallassezderived_Gingival_squamous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.91e-44 | 3 |
melanocyte | 3.71e-14 | 10 |
melanoblast | 3.71e-14 | 10 |
pigment cell | 2.08e-10 | 14 |
neurecto-epithelial cell | 1.42e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 6.78e-10 | 15 |
outer epithelium | 6.78e-10 | 15 |
enveloping layer of ectoderm | 6.78e-10 | 15 |
skin of body | 5.06e-08 | 41 |
integument | 3.19e-07 | 46 |
integumental system | 3.19e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
melanoma | 7.41e-67 | 2 |
histiocytoma | 1.07e-17 | 2 |
malignant fibroxanthoma | 1.07e-17 | 2 |
sarcoma | 1.42e-07 | 20 |
connective tissue cancer | 8.97e-07 | 6 |
musculoskeletal system cancer | 8.97e-07 | 6 |