FFCP PHASE1:Hg19::chr15:74467398..74467422,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=199bp_to_CU692640_5end | |||
|cluster_id=chr15:74467398..74467422,+ | |||
|coexpression_cluster_id=C1410 | |||
|description=CAGE_peak_1_at_CU692640_5end | |||
|id=chr15:74467398..74467422,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.34e-16!180;CL:0000057!9.59e-14!75;CL:0002334!3.49e-13!12;CL:0002620!8.01e-09!23;CL:0000499!4.90e-08!27;CL:0000680!1.65e-07!57;CL:0000056!1.65e-07!57;CL:0000355!1.65e-07!57;CL:0000183!1.66e-07!59;CL:0000327!2.63e-07!14;CL:0000187!4.63e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002334;4.40e-18;12!CL:0000153;1.31e-14;9!CL:0000447;1.31e-14;9!CL:0002620;8.18e-14;23!CL:0000138;1.59e-11;6!CL:0000327;1.22e-10;15!CL:0002579;1.82e-09;3!CL:0002595;4.83e-09;5!CL:0000499;3.81e-08;28!CL:0002575;2.32e-07;2!CL:0000057;4.43e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.22e-20,76;CL:0002334,8.60e-18,12;CL:0000153,8.82e-15,9;CL:0000447,8.82e-15,9;CL:0002620,1.02e-13,23;CL:0000058,1.17e-11,6;CL:0000138,1.17e-11,6;CL:0000327,9.65e-11,15;CL:0000048,6.52e-10,427;CL:0000723,1.41e-09,433;CL:0002320,1.62e-09,361;CL:0002579,2.33e-09,3;CL:0000034,3.82e-09,441;CL:0002595,7.90e-09,5;CL:0000499,3.25e-08,28;CL:0000134,4.90e-08,354;CL:0002575,2.33e-07,2;CL:0000219,8.01e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.70e-08;5!DOID:450;2.70e-08;5!DOID:66;2.70e-08;5!DOID:423;2.70e-08;5!DOID:0080000;2.70e-08;5!DOID:11722;2.70e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.74e-08,5;DOID:450,1.74e-08,5;DOID:66,1.74e-08,5;DOID:423,1.74e-08,5;DOID:0080000,1.74e-08,5;DOID:11722,1.74e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0002385!1.05e-08!63;UBERON:0001015!1.05e-08!63;UBERON:0000383!1.05e-08!63;UBERON:0001134!1.26e-08!61;UBERON:0002036!1.26e-08!61;UBERON:0003082!1.26e-08!61;UBERON:0004290!1.03e-07!70;UBERON:0000914!3.99e-07!83;UBERON:0002329!3.99e-07!83;UBERON:0003077!3.99e-07!83;UBERON:0003059!3.99e-07!83;UBERON:0007282!3.99e-07!83;UBERON:0009618!3.99e-07!83;UBERON:0007285!3.99e-07!83;UBERON:0000475!8.55e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;9.59e-15;9!UBERON:0000042;9.59e-15;9!UBERON:0003688;1.14e-11;6!UBERON:0002358;1.14e-11;6!UBERON:0003684;1.14e-11;6!UBERON:0001178;1.14e-11;6!UBERON:0003834;4.83e-09;5!UBERON:0001533;4.83e-09;5!UBERON:0002199;6.33e-08;46!UBERON:0002416;6.33e-08;46!UBERON:0002097;2.66e-07;41!UBERON:0005406;6.72e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.53e-11,6;UBERON:0002358,1.53e-11,6;UBERON:0003684,1.53e-11,6;UBERON:0001178,1.53e-11,6;UBERON:0002199,8.75e-11,46;UBERON:0002416,8.75e-11,46;UBERON:0004457,1.03e-10,12;UBERON:0000042,1.03e-10,12;UBERON:0002097,2.29e-09,41;UBERON:0002384,6.45e-09,371;UBERON:0003834,7.90e-09,5;UBERON:0001533,7.90e-09,5;UBERON:0005406,6.28e-07,2 | |||
|phase1_expression=1.45342703416445,0.856402095563933,2.25527046553554,0,1.34088328328186,2.61701557230111,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,1.44575660953827,2.50668955317945,3.76600949298142,2.3858578411533,2.43317435151318,0.189069634328136,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2663051166458,0.397227542439656,6.02356903572509,1.41867352879343,0.560677600142307,0,0,0,0.134710672069688,0,1.81628913173918,2.88087962239999,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.751190294532984,0,1.79389635688862,1.70845911054854,0.423863802319124,1.20036438433761,1.44273540933814,1.28820270022815,2.97786970130544,3.54430297706659,2.33848812386877,1.00973509697646,1.19664868234989,2.10139873864455,1.06502877754984,0.604512589365842,0,0,0,0,0,0,0,0,0,0,0,5.14592750554308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0.12624243342638,0,0,0,1.71072446022705,0.102827492703324,0,0,0.784917590417525,0.87192013766656,1.3200891447771,0,3.57656445851882,0,1.59562869950922,1.04007436911366,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,1.00034104211935,0,0.623912584592421,0.178428988797162,0,0.585707074963566,0.902838299183157,0,0,0,0,0.0868836144680828,8.02784745597236,7.89229874764969,0,0,0,0,0,0,3.2254015016441,0.460385919864187,3.64858122762996,3.45975702990393,2.04682899626681,3.37793234401576,4.45254199334973,1.07946785661859,3.19611105563629,0.657017248110473,2.07701771673448,0.813472649219715,0,0,0,0.114814448164607,0.182091168006717,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,3.21367859688319,0.096670718292122,0,0.307007349452259,0,0.429680979473094,0.290033387828457,0.170453254832202,0.623224249527161,0,0,0,0,0.929691098594572,0.94443704049192,0,0.308033580176089,0,0,1.11194531462352,0.286249773483982,1.116475108079,0,0,0,0,1.27281299170375,1.56989728039846,0.179872457583315,0,0.235624804691373,0,0,0,0,0.974853958525138,1.05650146756755,0.9554993798559,0.707027159768564,6.78048699721457,3.30819206127675,3.3171948762061,1.31535265576129,0,0,0,0.6196469961995,0.563391205064483,0,0,0,1.06428319221179,4.43326034125095,2.96365403663912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0.622079175323615,0,0,0,0.493217028184668,0,0,0,0,0,0,0,2.89999830173917,0,0,0,0,0,0,0,0,0,0,0,0.658156191461918,0,0,0.923403102045565,0,0,0,0,0,3.75550132947635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0,0,0.802577647298789,0,0,0,0,0,0,0.91821828489147,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,0.678923115418936,0,0.677942222341597,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.229160424011684,0,0,0,0.223171457441873,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.0524545881349981,0,0,0,1.42939065274673,0,0,0,0,1.63293680054705,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.471612915298998,0.414239055347196,0,0,0,0,0,0.2506898940227,0,0,0,0,0.244052529803926,0.1251909307065,0.573409195690071,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,1.34329322598187,0.701139929541673,0,0.189403005275089,0.251567901752575,0,1.83072054717539,0.604923695052956,2.02068360757615,0.295710299979268,0.159296767163702,0,0.155262956876259,0.414706207840855,0,1.04349012362347,0.150257608997218,0,0,0,0,0.464033759878494,1.99047944349308,0,2.74716564146234,2.35724642136143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0.754773679776773,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0.252071696221718,0,0.322951291263702,0,0,0,0,0,0,0,0.397832444232549,0.752103283492572,0,0,0,0,0.147856086217045,0.0675375846183947,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0.227662191351298,0.354809480650555,0,0,0.203909198930495,0,0,0,0.39246546425257,0,0,0,0,0,0.428859265059938,0,0.348724276104376,0,0,0,0,0,0.430227358820278,0,0,0.846774100381858,0,0,0,0,0,0,0,0.102662806856247,3.4794432940146,1.94284397223656,0,0,0,0,0,0,0.231522474323834,0.655678681511872,0,0,0,0.392616934229891,0,0.8453114551668,0.169927114687817,0,0.193373663920732,0,0,0,0,0,1.83491713361816,0,0,0.135982980381829,0,0.5290268405154,4.46394021800102,5.54610754357702,0.865253124247578,0,0,0,0,0,0,0,0.454672189309436,0,0,0,0.639701945702943,0.476128862927481,0,0,0,0.190941474834495,0.808468755832877,0.870866991587845,1.36893320434112,0,0,0.99798106963804,0,0,0,0,0,0.855690109280065,3.66206560484165,0,0.603821380773079,0 | |||
|short_description=p1@CU692640 | |||
}} |
Latest revision as of 04:09, 25 July 2015
Short description: | p1@CU692640 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CU692640_5end |
Coexpression cluster: | C1410_Pericytes_Fibroblast_chorionic_Hair_Chondrocyte_Meningeal_Preadipocyte |
Association with transcript: | 199bp_to_CU692640_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.22e-20 | 76 |
preadipocyte | 8.60e-18 | 12 |
GAG secreting cell | 8.82e-15 | 9 |
carbohydrate secreting cell | 8.82e-15 | 9 |
skin fibroblast | 1.02e-13 | 23 |
chondroblast | 1.17e-11 | 6 |
chondrocyte | 1.17e-11 | 6 |
extracellular matrix secreting cell | 9.65e-11 | 15 |
multi fate stem cell | 6.52e-10 | 427 |
somatic stem cell | 1.41e-09 | 433 |
connective tissue cell | 1.62e-09 | 361 |
omentum preadipocyte | 2.33e-09 | 3 |
stem cell | 3.82e-09 | 441 |
smooth muscle cell of the subclavian artery | 7.90e-09 | 5 |
stromal cell | 3.25e-08 | 28 |
mesenchymal cell | 4.90e-08 | 354 |
central nervous system pericyte | 2.33e-07 | 2 |
motile cell | 8.01e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.53e-11 | 6 |
peritoneum | 1.53e-11 | 6 |
abdominal cavity | 1.53e-11 | 6 |
visceral peritoneum | 1.53e-11 | 6 |
integument | 8.75e-11 | 46 |
integumental system | 8.75e-11 | 46 |
cavity lining | 1.03e-10 | 12 |
serous membrane | 1.03e-10 | 12 |
skin of body | 2.29e-09 | 41 |
connective tissue | 6.45e-09 | 371 |
thoracic segment blood vessel | 7.90e-09 | 5 |
subclavian artery | 7.90e-09 | 5 |
perirenal fat | 6.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.74e-08 | 5 |
myotonic disease | 1.74e-08 | 5 |
muscle tissue disease | 1.74e-08 | 5 |
myopathy | 1.74e-08 | 5 |
muscular disease | 1.74e-08 | 5 |
myotonic dystrophy | 1.74e-08 | 5 |