FFCP PHASE1:Hg19::chr15:64428608..64428613,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:64428608..64428613,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_at_chr15:64428608..64428613,+ | |description=CAGE_peak_at_chr15:64428608..64428613,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000764;1.07e-17;2!CL:0000558;1.07e-17;2!CL:0000346;2.89e-12;3!CL:1000428;2.89e-12;3!CL:0002559;7.01e-08;5!CL:0002543;8.97e-07;6 | |ontology_enrichment_celltype_v019=CL:0000764;1.07e-17;2!CL:0000558;1.07e-17;2!CL:0000346;2.89e-12;3!CL:1000428;2.89e-12;3!CL:0002559;7.01e-08;5!CL:0002543;8.97e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.27e-17,2;CL:0000765,1.27e-17,2;CL:0000050,1.27e-17,2;CL:0000038,1.27e-17,2;CL:0000558,1.27e-17,2;CL:0000547,1.27e-17,2;CL:0000549,1.27e-17,2;CL:0000550,1.27e-17,2;CL:0000552,1.27e-17,2;CL:0000346,2.89e-12,3;CL:1000428,2.89e-12,3;CL:0002559,7.01e-08,5;CL:0002543,8.48e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.66e-14;10!UBERON:0005564;2.66e-14;10 | |ontology_enrichment_development_v019=UBERON:0009117;2.66e-14;10!UBERON:0005564;2.66e-14;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.33e-17;8!UBERON:0003135;4.25e-13;11!UBERON:0000412;2.89e-12;3!UBERON:0001992;2.89e-12;3!UBERON:0002073;7.01e-08;5!UBERON:0000991;2.52e-07;21!UBERON:0003101;4.94e-07;22!UBERON:0000079;4.94e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0000473;1.33e-17;8!UBERON:0003135;4.25e-13;11!UBERON:0000412;2.89e-12;3!UBERON:0001992;2.89e-12;3!UBERON:0002073;7.01e-08;5!UBERON:0000991;2.52e-07;21!UBERON:0003101;4.94e-07;22!UBERON:0000079;4.94e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.33e-17,8;UBERON:0003135,4.25e-13,11;UBERON:0000412,2.89e-12,3;UBERON:0001992,2.89e-12,3;UBERON:0002073,7.01e-08,5;UBERON:0005086,7.01e-08,5;UBERON:0000991,2.52e-07,21;UBERON:0009196,2.52e-07,21;UBERON:0009117,2.52e-07,21;UBERON:0005564,2.52e-07,21;UBERON:0004176,4.94e-07,22;UBERON:0003101,4.94e-07,22;UBERON:0000079,4.94e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0.410623275218653,0,0,0.0821005894499457,0,0,0,0,0,0.30120591877825,0,0.542270404062111,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260118695119756,0.164437904603676,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.472674085820339,0,0.087834785693126,0.392937226493138,0,0,0,0.174129737299267,0,0,0,0,0.39752481473341,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0.225222960966644,1.53316637465883,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0.24666754841716,0,0.269421344139376,0.326923806226917,0.151357427644931,0.576175924479999,0.234321431833797,0,0,0,0.117434498643765,0,0.140450806702248,0,0.122834317311768,0,0,0.494533858557114,0,0,0.168336113954066,0,0,0,0,0,0.340296549480063,0,0.213557388818567,0,0,0.103052529238439,0,0.18611685633159,0,0,0,0.0920498986422993,0,0,0.10075209822764,0.169560592310488,0,0,0.286804595389004,0,0,0,0,0,0.36497735907583,0,0,1.38134921352481,0.928735856063958,0,0,0,0,0,0,0.474541238222193,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0.433099343283221,0.462985512576611,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.22001485746285,0,3.57656445851882,0,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0,0,0.300946099727719,0,0,0,0,0.173767228936166,0.195801157462741,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0.34444334449382,0,0,0.451199612907412,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0.223874754722178,1.31555925987561,0.522870902049801,0,0.328014645699706,0.325378394664303,0,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0.145016693914229,0,0.178064071293475,0,0,0.127612712494584,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0.511795582622668,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179515288819544,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0.317873157960757,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0.171594997861965,0,0,0,0,0,0.305994652908965,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621748802331122,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0.179088841081487,0,0.219284049578707,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.115233987555779,0.171488009437418,0,0,0.590969204419841,0,0,0,0,0,0.215927591218621,0.47775168788705,0,0,0,0.173858272302579,0.801711364730253,0,0,0,0,0.118332000730565,0.0852134047591577,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0,0,0,0,0,6.44118934855035,2.67964130156179,0,0,0,0,0.0645889098360061,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 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| ||
|short_description=p@chr15:64428608..64428613,+ | |short_description=p@chr15:64428608..64428613,+ | ||
}} | }} |
Latest revision as of 03:19, 25 July 2015
Short description: | p@chr15:64428608..64428613, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:64428608..64428613, + |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.27e-17 | 2 |
erythroblast | 1.27e-17 | 2 |
megakaryocyte-erythroid progenitor cell | 1.27e-17 | 2 |
erythroid progenitor cell | 1.27e-17 | 2 |
reticulocyte | 1.27e-17 | 2 |
proerythroblast | 1.27e-17 | 2 |
basophilic erythroblast | 1.27e-17 | 2 |
polychromatophilic erythroblast | 1.27e-17 | 2 |
orthochromatic erythroblast | 1.27e-17 | 2 |
hair follicle dermal papilla cell | 2.89e-12 | 3 |
stem cell of epidermis | 2.89e-12 | 3 |
hair follicle cell | 7.01e-08 | 5 |
vein endothelial cell | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
testis | 1.33e-17 | 8 |
male reproductive organ | 4.25e-13 | 11 |
dermal papilla | 2.89e-12 | 3 |
papillary layer of dermis | 2.89e-12 | 3 |
hair follicle | 7.01e-08 | 5 |
hair follicle placode | 7.01e-08 | 5 |
gonad | 2.52e-07 | 21 |
indifferent external genitalia | 2.52e-07 | 21 |
indifferent gonad | 2.52e-07 | 21 |
gonad primordium | 2.52e-07 | 21 |
external genitalia | 4.94e-07 | 22 |
male organism | 4.94e-07 | 22 |
male reproductive system | 4.94e-07 | 22 |