FFCP PHASE1:Hg19::chr15:50193489..50193500,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:50193489..50193500,- | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_at_chr15:50193489..50193500,- | |description=CAGE_peak_at_chr15:50193489..50193500,- | ||
|id=chr15:50193489..50193500,- | |id=chr15:50193489..50193500,- | ||
|ontology_enrichment_celltype=CL:0002504!2.28e-10!3;CL:1000279!2.28e-10!3;CL:1000280!2.28e-10!3;CL:0002579!1.43e-09!3;CL:0000136!1.56e-09!15;CL:1000487!2.91e-07!2 | |ontology_enrichment_celltype=CL:0002504!2.28e-10!3;CL:1000279!2.28e-10!3;CL:1000280!2.28e-10!3;CL:0002579!1.43e-09!3;CL:0000136!1.56e-09!15;CL:1000487!2.91e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002504;9.52e-20;3!CL:1000279;9.52e-20;3!CL:1000280;9.52e-20;3!CL:0000136;6.28e-18;13!CL:1000487;1.49e-08;2!CL:0000153;3.34e-07;9!CL:0000447;3.34e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002504,8.67e-20,3;CL:1000279,8.67e-20,3;CL:1000280,8.67e-20,3;CL:0000136,1.13e-15,15;CL:1000487,1.50e-08,2;CL:0000153,3.78e-07,9;CL:0000447,3.78e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!1.05e-12!6;UBERON:0002358!1.05e-12!6;UBERON:0003684!1.05e-12!6;UBERON:0001178!1.05e-12!6;UBERON:0004457!9.59e-09!12;UBERON:0000042!9.59e-09!12;UBERON:0001155!2.06e-08!9;UBERON:0003127!5.49e-07!2;UBERON:0000059!8.32e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001155;3.34e-07;9!UBERON:0004457;3.34e-07;9!UBERON:0000042;3.34e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001155,3.24e-07,9 | |||
|phase1_expression=0,0.428201047781966,0.563817616383885,0,1.34088328328186,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0,0,0.640672166455702,0.423863802319124,0,0,0,0,0,0.0974370051611986,0,0,1.2931684545505,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0.157702415033935,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384417447767103,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,0,0,0.34444334449382,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97859703341646,1.09814811894422,0.471249609382746,0,0,0,0,0,0,0.272999822815972,2.54529777516683,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,1.31717957183961,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0.247127877893006,0.313265848516366,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,1.10043013569766,0,0,0,0,0,1.63205341010842,0.2506898940227,3.67614692116154,6.88532524490589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,3.55924488638614,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601682626794058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709618961301111,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0.924351257262837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215166616178029,0.665320713092027,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0.428201047781966,0.563817616383885,0,1.34088328328186,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0,0,0.640672166455702,0.423863802319124,0,0,0,0,0,0.0974370051611986,0,0,1.2931684545505,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0.157702415033935,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384417447767103,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,0,0,0.34444334449382,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97859703341646,1.09814811894422,0.471249609382746,0,0,0,0,0,0,0.272999822815972,2.54529777516683,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,1.31717957183961,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0.247127877893006,0.313265848516366,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,1.10043013569766,0,0,0,0,0,1.63205341010842,0.2506898940227,3.67614692116154,6.88532524490589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,3.55924488638614,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601682626794058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709618961301111,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0.924351257262837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215166616178029,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr15:50193489..50193500,- | |short_description=p@chr15:50193489..50193500,- | ||
}} | }} |
Latest revision as of 02:14, 25 July 2015
Short description: | p@chr15:50193489..50193500, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:50193489..50193500, - |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
enteric smooth muscle cell | 8.67e-20 | 3 |
smooth muscle cell of large intestine | 8.67e-20 | 3 |
smooth muscle cell of colon | 8.67e-20 | 3 |
fat cell | 1.13e-15 | 15 |
smooth muscle cell of prostate | 1.50e-08 | 2 |
GAG secreting cell | 3.78e-07 | 9 |
carbohydrate secreting cell | 3.78e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
colon | 3.24e-07 | 9 |