FFCP PHASE1:Hg19::chr15:40575540..40575551,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:40575540..40575551,- | |||
|description=CAGE_peak_at_chr15:40575540..40575551,- | |||
|id=chr15:40575540..40575551,- | |||
|ontology_enrichment_celltype=CL:0002322!1.43e-09!5;CL:0002605!3.65e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002605;1.96e-14;3!CL:0000333;2.74e-09;5!CL:0000128;6.21e-07;7!CL:0000126;6.21e-07;7!CL:0000127;6.21e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.83e-14,3;CL:0000128,6.04e-07,7;CL:0000126,6.04e-07,7;CL:0000127,6.04e-07,7;CL:0002453,6.04e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.81e-21;2 | |||
|ontology_enrichment_disease=DOID:171!1.96e-08!10;DOID:3095!6.22e-08!22;DOID:2994!6.22e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:3193;3.81e-21;2!DOID:962;3.81e-21;2!DOID:171;7.81e-17;10!DOID:1192;1.40e-14;3!DOID:3095;3.21e-08;22!DOID:2994;3.21e-08;22!DOID:169;5.92e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,3.81e-21,2;DOID:962,3.81e-21,2;DOID:171,8.13e-17,10;DOID:1192,1.40e-14,3;DOID:3095,3.27e-08,22;DOID:2994,3.27e-08,22;DOID:169,5.92e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0002420!1.04e-14!9;UBERON:0007245!1.04e-14!9;UBERON:0010009!1.04e-14!9;UBERON:0010011!1.04e-14!9;UBERON:0000454!1.04e-14!9;UBERON:0000369!8.26e-13!4;UBERON:0002435!8.26e-13!4;UBERON:0000204!8.26e-13!4;UBERON:0010082!8.26e-13!4;UBERON:0009663!1.47e-12!7;UBERON:0002780!1.17e-10!41;UBERON:0001890!1.17e-10!41;UBERON:0006240!1.17e-10!41;UBERON:0003080!2.28e-10!42;UBERON:0000073!4.56e-10!94;UBERON:0001016!4.56e-10!94;UBERON:0002308!8.85e-10!9;UBERON:0000125!8.85e-10!9;UBERON:0001017!4.78e-09!82;UBERON:0001869!5.65e-09!32;UBERON:0001049!8.46e-09!57;UBERON:0005068!8.46e-09!57;UBERON:0006241!8.46e-09!57;UBERON:0007135!8.46e-09!57;UBERON:0002791!1.13e-08!33;UBERON:0005743!1.67e-08!86;UBERON:0002020!2.17e-08!34;UBERON:0003528!2.17e-08!34;UBERON:0001893!2.17e-08!34;UBERON:0005383!2.86e-08!3;UBERON:0005382!2.86e-08!3;UBERON:0002346!5.24e-07!90;UBERON:0002616!6.56e-07!59;UBERON:0001874!8.34e-07!1;UBERON:0000955!9.47e-07!69;UBERON:0006238!9.47e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0005383;1.68e-53;3!UBERON:0005382;1.68e-53;3!UBERON:0001874;9.91e-41;1!UBERON:0000369;1.81e-40;4!UBERON:0002435;1.81e-40;4!UBERON:0000204;1.81e-40;4!UBERON:0009663;1.14e-23;7!UBERON:0001873;3.81e-21;2!UBERON:0003714;3.81e-21;2!UBERON:0002420;1.13e-18;9!UBERON:0000125;1.13e-18;9!UBERON:0007245;1.13e-18;9!UBERON:0002308;1.13e-18;9!UBERON:0010009;1.13e-18;9!UBERON:0010011;1.13e-18;9!UBERON:0000454;1.13e-18;9!UBERON:0002791;4.61e-12;32!UBERON:0002346;3.60e-11;4!UBERON:0000923;3.60e-11;4!UBERON:0010316;3.60e-11;4!UBERON:0005291;3.60e-11;4!UBERON:0001869;8.90e-11;32!UBERON:0003528;2.15e-10;34!UBERON:0002020;2.15e-10;34!UBERON:0001893;2.15e-10;34!UBERON:0000013;2.74e-09;5!UBERON:0002410;2.74e-09;5!UBERON:0002050;3.35e-09;5!UBERON:0005423;3.35e-09;5!UBERON:0002780;2.59e-07;41!UBERON:0001890;2.59e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005383,1.68e-53,3;UBERON:0005382,1.68e-53,3;UBERON:0001874,1.48e-40,1;UBERON:0000369,1.81e-40,4;UBERON:0002435,1.81e-40,4;UBERON:0000204,1.81e-40,4;UBERON:0010082,1.81e-40,4;UBERON:0009663,1.14e-23,7;UBERON:0001873,3.11e-21,2;UBERON:0010122,3.11e-21,2;UBERON:0003714,3.81e-21,2;UBERON:0002420,1.13e-18,9;UBERON:0000125,1.13e-18,9;UBERON:0007245,1.13e-18,9;UBERON:0002308,1.13e-18,9;UBERON:0010009,1.13e-18,9;UBERON:0010011,1.13e-18,9;UBERON:0000454,1.13e-18,9;UBERON:0002791,1.24e-11,32;UBERON:0001869,1.24e-11,32;UBERON:0003528,5.12e-11,34;UBERON:0002020,5.12e-11,34;UBERON:0001893,5.12e-11,34;UBERON:0002780,2.59e-09,41;UBERON:0001890,2.59e-09,41;UBERON:0003080,2.59e-09,41;UBERON:0006240,2.59e-09,41;UBERON:0000013,2.74e-09,5;UBERON:0002410,2.74e-09,5;UBERON:0002346,6.09e-08,86;UBERON:0001016,1.45e-07,89;UBERON:0000073,2.08e-07,53;UBERON:0002616,2.08e-07,53;UBERON:0001049,4.68e-07,56;UBERON:0005068,4.68e-07,56;UBERON:0006241,4.68e-07,56;UBERON:0007135,4.68e-07,56 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91624195102038,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.265059536642971,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29133233388275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.937057782901357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0.127894371303652,0,0,0,0.169732529954025,0,1.61116493536703,2.23457967189298,0,0.0788617450012534,0,0,0,0.449604575675217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04250266890802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0.356760272332706,0,0,0,0.0771741581079447,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0.506794004045748,0.305966489225945,0,0,0,0,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:40575540..40575551,- | |||
}} |
Latest revision as of 01:27, 25 July 2015
Short description: | p@chr15:40575540..40575551, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:40575540..40575551, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.83e-14 | 3 |
oligodendrocyte | 6.04e-07 | 7 |
macroglial cell | 6.04e-07 | 7 |
astrocyte | 6.04e-07 | 7 |
oligodendrocyte precursor cell | 6.04e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 3.81e-21 | 2 |
neurofibroma | 3.81e-21 | 2 |
neuroectodermal tumor | 8.13e-17 | 10 |
peripheral nervous system neoplasm | 1.40e-14 | 3 |
germ cell and embryonal cancer | 3.27e-08 | 22 |
germ cell cancer | 3.27e-08 | 22 |
neuroendocrine tumor | 5.92e-08 | 6 |