FFCP PHASE1:Hg19::chr15:39889193..39889209,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:39889193..39889209,+ | |||
|coexpression_cluster_id=C453 | |coexpression_cluster_id=C453 | ||
|description=CAGE_peak_at_chr15:39889193..39889209,+ | |description=CAGE_peak_at_chr15:39889193..39889209,+ | ||
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|ontology_enrichment_celltype=CL:0000055!1.03e-12!180;CL:0000057!4.79e-11!75;CL:0002139!1.21e-10!24;CL:0000222!2.92e-10!119;CL:0002371!1.10e-09!591;CL:0000548!2.68e-09!679;CL:0000004!2.68e-09!679;CL:0000255!2.68e-09!679;CL:0000012!8.28e-09!682;CL:0000115!1.59e-08!35;CL:0000220!2.49e-08!246;CL:0002321!3.79e-08!248;CL:0000071!4.95e-08!18;CL:0002546!4.95e-08!18;CL:0000144!5.59e-08!625;CL:0002078!6.79e-07!44 | |ontology_enrichment_celltype=CL:0000055!1.03e-12!180;CL:0000057!4.79e-11!75;CL:0002139!1.21e-10!24;CL:0000222!2.92e-10!119;CL:0002371!1.10e-09!591;CL:0000548!2.68e-09!679;CL:0000004!2.68e-09!679;CL:0000255!2.68e-09!679;CL:0000012!8.28e-09!682;CL:0000115!1.59e-08!35;CL:0000220!2.49e-08!246;CL:0002321!3.79e-08!248;CL:0000071!4.95e-08!18;CL:0002546!4.95e-08!18;CL:0000144!5.59e-08!625;CL:0002078!6.79e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.04e-14;24!CL:0000115;1.87e-10;36!CL:0000071;3.25e-10;18 | |ontology_enrichment_celltype_v019=CL:0002139;1.04e-14;24!CL:0000115;1.87e-10;36!CL:0000071;3.25e-10;18 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.03e-14,24;CL:0000115,3.31e-12,36;CL:0002078,2.10e-10,45;CL:0000071,2.10e-10,18;CL:0002546,2.10e-10,18;CL:0000222,2.16e-10,121;CL:0000057,3.22e-09,76;CL:0000213,1.28e-07,58;CL:0000215,1.28e-07,58;CL:1000413,6.18e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;3.25e-10;18 | |ontology_enrichment_development_v019=CL:0002546;3.25e-10;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!3.98e-16!69;UBERON:0004872!4.40e-15!84;UBERON:0002049!1.69e-14!79;UBERON:0007798!1.69e-14!79;UBERON:0001981!4.71e-14!60;UBERON:0007500!4.71e-14!60;UBERON:0004537!4.71e-14!60;UBERON:0006965!4.71e-14!60;UBERON:0001637!8.94e-11!42;UBERON:0003509!8.94e-11!42;UBERON:0004572!8.94e-11!42;UBERON:0001009!1.45e-10!113;UBERON:0003914!3.38e-10!118;UBERON:0004535!3.77e-10!110;UBERON:0000487!3.87e-08!22;UBERON:0001986!4.95e-08!18;UBERON:0004638!4.95e-08!18;UBERON:0004852!4.95e-08!18;UBERON:0004573!5.31e-08!33;UBERON:0004571!5.31e-08!33;UBERON:0000490!8.81e-08!138;UBERON:0000468!1.41e-07!659;UBERON:0000926!2.10e-07!448;UBERON:0004120!2.10e-07!448;UBERON:0006603!2.10e-07!448;UBERON:0000480!2.16e-07!626;UBERON:0000467!2.44e-07!625 | |ontology_enrichment_uberon=UBERON:0000055!3.98e-16!69;UBERON:0004872!4.40e-15!84;UBERON:0002049!1.69e-14!79;UBERON:0007798!1.69e-14!79;UBERON:0001981!4.71e-14!60;UBERON:0007500!4.71e-14!60;UBERON:0004537!4.71e-14!60;UBERON:0006965!4.71e-14!60;UBERON:0001637!8.94e-11!42;UBERON:0003509!8.94e-11!42;UBERON:0004572!8.94e-11!42;UBERON:0001009!1.45e-10!113;UBERON:0003914!3.38e-10!118;UBERON:0004535!3.77e-10!110;UBERON:0000487!3.87e-08!22;UBERON:0001986!4.95e-08!18;UBERON:0004638!4.95e-08!18;UBERON:0004852!4.95e-08!18;UBERON:0004573!5.31e-08!33;UBERON:0004571!5.31e-08!33;UBERON:0000490!8.81e-08!138;UBERON:0000468!1.41e-07!659;UBERON:0000926!2.10e-07!448;UBERON:0004120!2.10e-07!448;UBERON:0006603!2.10e-07!448;UBERON:0000480!2.16e-07!626;UBERON:0000467!2.44e-07!625 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.25e-10;18!UBERON:0001986;3.25e-10;18!UBERON:0004852;3.25e-10;18!UBERON:0001637;3.44e-10;42!UBERON:0003509;3.44e-10;42!UBERON:0004572;3.44e-10;42!UBERON:0000487;7.29e-10;22!UBERON:0000055;2.64e-09;65!UBERON:0007500;7.85e-09;56!UBERON:0001981;7.85e-09;56!UBERON:0004537;7.85e-09;56!UBERON:0006914;3.94e-08;25!UBERON:0004573;4.74e-08;33!UBERON:0004571;4.74e-08;33!UBERON:0000947;2.26e-07;21!UBERON:0010191;2.26e-07;21!UBERON:0003688;3.06e-07;6!UBERON:0002358;3.06e-07;6!UBERON:0003684;3.06e-07;6!UBERON:0001178;3.06e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0004638;3.25e-10;18!UBERON:0001986;3.25e-10;18!UBERON:0004852;3.25e-10;18!UBERON:0001637;3.44e-10;42!UBERON:0003509;3.44e-10;42!UBERON:0004572;3.44e-10;42!UBERON:0000487;7.29e-10;22!UBERON:0000055;2.64e-09;65!UBERON:0007500;7.85e-09;56!UBERON:0001981;7.85e-09;56!UBERON:0004537;7.85e-09;56!UBERON:0006914;3.94e-08;25!UBERON:0004573;4.74e-08;33!UBERON:0004571;4.74e-08;33!UBERON:0000947;2.26e-07;21!UBERON:0010191;2.26e-07;21!UBERON:0003688;3.06e-07;6!UBERON:0002358;3.06e-07;6!UBERON:0003684;3.06e-07;6!UBERON:0001178;3.06e-07;6 | ||
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|phase1_expression=5.99538651592837,2.78330681058278,2.53717927372748,3.00219895059391,2.68176656656373,3.48935409640147,2.53299878168311,0,0,0.982935746006035,0,4.15038607047327,1.84636884759917,0,0.331397375727916,4.70627602516243,2.41077811209591,3.65155045193687,4.39139518911456,0,0.204000691244253,0.626909442956176,0,0.136874425072884,0.376627918784408,0,0,0,0.393364276848904,0,0.464448369948228,0,1.8072355126695,0,0,0,0,0,1.60435557976113,0,0.223915474239924,0,0.515151135268373,0,0,0,5.11343881192506,0.411167888021826,0.309706370895104,3.16461631554365,0.768482119587302,0.236482229888585,4.48169384957604,0.645484683583826,0,1.69418105588344,0.545812300115692,0.224723484445085,3.36692281607993,0.962787081228281,0,3.29851300186716,0.199463657621632,0.426224750532694,4.35313857942876,1.13477044938228,0,3.01498398308092,2.60741459210101,0.217188844705117,6.05399502633369,0.736555271975129,0.316462387440884,0,0,0,0.112328631146495,0.450530678524519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0,0,0,1.15076305659177,0.722878304769133,3.50936537445123,0.289693037921647,0,2.43317435151318,0.189069634328136,0,0.175669571386252,0,0.364295288292542,0,0,0,0,0,0,0,3.7764857399674,2.58070378531837,3.47140501607594,6.78369530308812,0.838998872419812,1.6507082516404,2.29894463190492,1.29208379584664,1.06729878806013,3.01248551488203,1.61131726843659,3.80136052859256,2.19655851793353,1.83831540172934,1.62028389576352,2.05389375053383,2.2452937262617,2.70267553159973,0,0.949265659568129,2.93122790288652,0,0,0.436094052142534,33.2971207635863,1.64619665163954,1.98613771219828,0.860509862246441,0.354668382198357,1.12135520028461,5.33744978648525,3.7000132262574,1.24484414159907,0.134710672069688,0.817309515567294,0,0,0,0,0.570471821544449,0,0,0,0,0.61246251376468,0,0.309977343527296,9.50402285825643,11.1270118175351,0.910161361938026,0,0.168336113954066,0,0.831192346452549,6.58466431321257,8.58165828237255,12.6199969481541,1.02088964844019,1.25572744982203,3.20336083227851,2.11931901159562,2.40072876867522,1.44273540933814,1.8034837803194,2.41951913231067,3.71307930930786,1.16924406193438,0.504867548488229,2.66944706062668,0.484938170456436,1.06502877754984,0.302256294682921,2.37384829234683,1.73934767846967,4.09119180886252,4.30206893083506,0,0.132529768321485,0,0,0,0.72995471815166,1.56449532329816,5.78916844373597,5.52539685409922,3.71494342425583,0,0.236613600079688,0,0,0.220587945464788,0.217879444092406,0.237270619111097,0.134831308160164,0,0.38474715694639,0,2.80483547606892,0.8231480226628,1.47008711385542,0,0,0,0,0,0.343135620597051,0.98775256867763,0,0.301586917234893,0.0925884451585296,0.325808305310325,0,0,0,0.234817388471643,1.29929802984966,6.01881166349594,3.61482889245737,0,0,0,0,0,0.93733833986777,2.51973192298289,0.850650583454319,1.88072897675981,0.871901815541886,0.766765358330422,0,0,0,0,0,0,0,0,0,0.308482478109971,0.300343057843917,0,0,0,0.07333828582095,1.42198887333556,0,0.845302752556,1.06375246633948,0,0.514414748524284,0,0.266422179016099,0.142977993658148,0,0.823240336780769,0,0,0,0,0.871533458600294,0,0,0,0,1.4377491329495,1.14861935834114,0,1.59259437334337,0.61642896765115,2.32779252211864,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0.271265023699736,13.7260768610333,14.0958901149758,11.985383542579,19.5626163037831,5.41702979509894,4.5481500811197,1.03473071292505,1.32845119707087,3.13427586520895,1.39013783148933,0.195801157462741,0.343143423810856,0,0.647142602455851,0.213455115606889,0.909382714338778,3.32870879020994,1.81434175997808,5.21026396419431,14.8858114089421,5.3325417942284,2.81906128362542,8.69902323413396,7.23842645146234,2.96836132889982,0.308419387605311,0.710246901252508,0.164254312027618,0.519254429183621,0.348631135379878,0,2.20557117333613,0.276242966807689,0.34444334449382,0,0.262248829918848,0,0,0,0,0,0,1.87103075804167,2.80690690932781,3.08454505380579,0.270946437543853,0,0.254876273045038,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0.0915694648183434,0,0,1.30012049207304,1.6068392984416,0,0.154048617114644,0,0.275673144969061,0,0.145016693914229,0,0.0890320356467374,0.826424576804891,4.61256161676255,7.52915003718046,0.30347334256665,0,2.51849877464512,0,0,3.72614221221915,0.869932992075073,2.59453906745488,0.143124886741991,0.744316738719335,2.21465597303108,0.190630193923825,0.511795582622668,0,0.318203247925937,0,0.899362287916574,0.54907405947211,0.353437207037059,2.62837226045311,0,1.26377536871694,0,0.487426979262569,2.11300293513511,0,0.282810863907425,0,0.551365343546124,4.64407282668854,3.06915619677634,1.15755106853338,1.31178950409327,6.69604243976923,6.50629346009475,2.53526042279017,0.286822704408103,0.491245205065606,7.84676313258751,0,0.211107635297664,0,0,0.349934720244983,1.15466535270614,4.02181365321472,1.08890984861323,0.0941438007767792,2.58303223602738,3.36942951335251,4.43430153536676,3.21612760289743,0,0,0,0,0,0,0,0,0.213648142254946,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| ||
|short_description=p@chr15:39889193..39889209,+ | |short_description=p@chr15:39889193..39889209,+ | ||
}} | }} |
Latest revision as of 01:23, 25 July 2015
Short description: | p@chr15:39889193..39889209, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39889193..39889209, + |
Coexpression cluster: | C453_hepatic_Ewing_neurofibroma_spindle_tridermal_Olfactory_bone |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.03e-14 | 24 |
endothelial cell | 3.31e-12 | 36 |
meso-epithelial cell | 2.10e-10 | 45 |
blood vessel endothelial cell | 2.10e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.10e-10 | 18 |
mesodermal cell | 2.16e-10 | 121 |
fibroblast | 3.22e-09 | 76 |
lining cell | 1.28e-07 | 58 |
barrier cell | 1.28e-07 | 58 |
endothelial cell of artery | 6.18e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
vessel | 4.63e-17 | 68 |
epithelial tube open at both ends | 1.07e-14 | 59 |
blood vessel | 1.07e-14 | 59 |
blood vasculature | 1.07e-14 | 59 |
vascular cord | 1.07e-14 | 59 |
splanchnic layer of lateral plate mesoderm | 4.00e-14 | 83 |
vasculature | 4.08e-14 | 78 |
vascular system | 4.08e-14 | 78 |
artery | 1.96e-12 | 42 |
arterial blood vessel | 1.96e-12 | 42 |
arterial system | 1.96e-12 | 42 |
epithelial tube | 1.19e-10 | 117 |
blood vessel endothelium | 2.10e-10 | 18 |
endothelium | 2.10e-10 | 18 |
cardiovascular system endothelium | 2.10e-10 | 18 |
cardiovascular system | 2.86e-10 | 109 |
circulatory system | 3.01e-10 | 112 |
simple squamous epithelium | 4.95e-10 | 22 |
systemic artery | 1.21e-08 | 33 |
systemic arterial system | 1.21e-08 | 33 |
squamous epithelium | 2.84e-08 | 25 |
lateral plate mesoderm | 8.29e-08 | 203 |
aorta | 1.15e-07 | 21 |
aortic system | 1.15e-07 | 21 |
omentum | 2.72e-07 | 6 |
peritoneum | 2.72e-07 | 6 |
abdominal cavity | 2.72e-07 | 6 |
visceral peritoneum | 2.72e-07 | 6 |
endothelial tube | 6.18e-07 | 9 |
arterial system endothelium | 6.18e-07 | 9 |
endothelium of artery | 6.18e-07 | 9 |
unilaminar epithelium | 8.33e-07 | 148 |